Podarcis raffonei (Aeolian wall lizard): 128414526
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Entry
128414526 CDS
T09310
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
praf04990
]
128414526 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
praf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128414526 (SNED1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_Teneurin
Ig_DSCAM-DSCAML_C
NDNF
EGF_3
cEGF
STIV_turret_3rd
Motif
Other DBs
NCBI-GeneID:
128414526
NCBI-ProteinID:
XP_053245907
LinkDB
All DBs
Position
5:complement(66464563..66535317)
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AA seq
1447 aa
AA seq
DB search
MRGLSGWVVLLALGSWLRLRAKGAVPLADFYPFGPAQGDTATPQQDDGGSGLRPIAVKFP
FFGAAHMALYVNNNGIISFLKEVSQFTPVAFPISNDRRVVAAFWADVDNRRAGQVHYRET
KDQAILMRATKDIQQYFPEFPQFSAQWVFVATWYQVTFFGGNSLSPVNTFQIVLITDGML
SFTIFNYESITWTTGMHASSGGDAAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEM
TTNVGIPGRWVFRIDDAQVQVGGCNNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLA
GFTGKRCHIDVDECASSPCQNKASCIDGINSFSCWCPPGFKGATCEVEESPCEAKECQNG
GECQVANRTAVCLCQPGFTGEDCETEINECDSNPCLNGGRCMDLVDNYTCVCVAPFTGQR
CETDPSACEGRNCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRMPSACMSNPCQNEG
TCLESSQGYVCECVEGYTGTDCEDKLSEDCECRNGGKCLDGNVTICQCPPGYFGLLCEFE
VTATPCNMNTQCPDGGYCMEYGGNYLCVCHTDYGTNHTEPPSPCDSDPCLNGGSCEAQDD
SYTCECTRGFVGRHCEKAKPKLCSSGPCRNGGTCKESDGEYHCTCPYRFTGKHCEIGKPD
PCASGPCHNGGTCFHYIGKYKCDCLPGYSGRHCEIAPSPCLLHPCENGATCQDLGNSYLC
TCPAGYTGRHCQSEVDCGTPKEVKHAQVAFNSTKLGSLAEYRCDLGYVLSPQNNPRVCRT
QGVWSDPPECNEIDECRSQPCLNGGLCKDRIATFLCLCKTGYTGHHCELEIDECLSDPCK
NGGTCTDRPGSFACHCPEGFIGTQCETEVDACESNPCRNGGDCENYSGSYLCVCPEGFFG
YHCEIASDPCFSNPCGSRGYCLPSNGSHICTCKVGYTGNNCEKELLPPTSLKVEKVEETG
LTISWRPPMDPAAKQMIDGYAVTYVSFDGSYRWTDYVDRSRAAHHLRALASGKAYNISVF
SVKRKSNNKNDISRPVMLVTRTRPHPVEGFEIANVTATTITVQWALHRLKYATVSKVRVS
IRQPDDVEDRAVELNNTVTKYTFWDLQPGQKYLIHMWTLSGLSAEDHPTESFATAPVYVW
TRPLPPRNLTASRVTATSVQMVWEQPLVGTVEGYIINVTTSQSVKSRYVPNGKLSSYTVR
DLNPGQRYRLSVMAVQNTDQGQVTSEPAHLYITALQKDGTPERRWSQTGHPRVLRNRVPP
AFLPELRLLADHNAPEEPSQAPRFTELVDGRGRITTKFSNLPSRSVTVRTQPEAPMKVEE
NGEESTKQVSQALHLSEPENSKRESGKQNCSINFCQNGGTCVAGPESYHCDCNPGFKGRQ
CELACKKVPQSCTRLYSETKSFPVWEGGVCHYLYKRIYKVHQDVCYKESCESTVSNKAHS
RKQSNRH
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctgtccggctgggtggtgctgctggcgctcggcagctggctccggctgcgg
gcgaagggcgccgtgcccctggctgacttctaccccttcgggccggcgcagggggacacg
gccaccccgcagcaggacgacggcggctcggggctccggcccatcgccgtgaagttcccc
ttcttcggcgcggctcacatggcgctctacgtcaacaacaatggaatcatttcctttttg
aaagaagtgtctcagtttacaccagtggctttccccatctccaacgaccggcgtgtggtt
gctgctttctgggcggacgtagataaccggcgtgcaggccaagtgcattaccgggaaact
aaggaccaagccattttgatgagggccactaaggacatccagcaatatttcccagaattc
ccacagttctctgcccaatgggtattcgtggccacttggtaccaggtgaccttttttgga
ggaaactcgctttctcccgttaacaccttccaaatagtcctcatcaccgacggcatgctg
tccttcactatcttcaactacgagtccatcacctggaccaccggaatgcatgccagcagt
ggaggagacgcagcaggcctgggaggcattgcggcccaggcaggtttcaatgccggtgat
ggaaagcggtattttaacatccccggatcccgcactgatgacattgtcgacgtggagatg
acgacaaatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaa
gtggggggctgcaacaacacaacatcggtgtgcctgacactccgcccttgtctgaatgga
gggaagtgtattgaggactgcatcacagggaacccctcctacacctgttcttgtctggct
ggcttcactggaaagcgatgccatattgatgtggatgagtgcgcttccagcccatgtcag
aacaaagcctcctgcatcgatggcatcaacagcttcagttgctggtgtccaccaggattt
aaaggagccacgtgtgaagttgaggagtctccatgtgaagccaaagagtgccagaatggc
ggggaatgccaagtggccaacagaacagctgtgtgcctttgccagccaggttttacagga
gaagattgtgagacagaaataaacgaatgcgattccaacccatgcctgaacggtgggcga
tgtatggacctagtggacaattacacctgtgtgtgtgtggcgccattcacaggacagcgc
tgtgaaacagatccttcagcctgtgagggcagaaactgcaggaaccgacagacatgcaac
tatattcgcccagggcgctacatctgcacatgctctccaggctactatgggaacaactgt
caatatggtgggcccagaatgcccagtgcctgcatgtccaatccatgtcagaacgaaggc
acttgccttgaaagcagccaaggatatgtgtgtgagtgtgtggaaggatacacaggcacc
gactgcgaagacaagctctcagaggactgcgagtgtcggaatggggggaagtgtctggat
ggaaacgtcaccatatgccagtgccctccaggatattttggtcttctctgtgaatttgaa
gtgaccgcaacaccttgcaatatgaacacccagtgcccagatggaggctactgtatggag
tacggtggcaattacctttgtgtgtgccatacggattacggcacaaaccacactgagcca
ccctctccttgtgactcggatccttgtctgaatggcggatcatgtgaagctcaagatgat
tcctacacctgtgaatgtacccgaggcttcgtcggcaggcactgtgagaaagcaaagcca
aagctgtgcagttctgggccctgccgcaatggagggacgtgtaaagaatcagacggagaa
taccactgcacctgtccttaccgcttcacggggaagcactgtgagataggcaaacctgac
ccctgtgcctcagggccttgtcataatgggggtacctgtttccactatattggcaagtac
aaatgtgactgcctcccaggatattccgggcgacactgcgagatagctccttctccttgc
ctcctgcatccatgtgaaaatggagccacttgtcaggatcttggcaacagctatttgtgc
acatgcccagctggctacacaggaaggcactgccaatcagaggtagactgtggtaccccc
aaggaggtgaagcatgcccaggtggcatttaactccactaagctgggctctctggcagaa
taccggtgtgatctgggttatgttctcagtccccagaataaccccagggtgtgcagaaca
caaggcgtctggagtgaccctccagagtgtaacgaaattgatgaatgcagatctcagcca
tgtctgaacggaggcttgtgtaaagatcgaattgccactttcctgtgcttgtgcaaaact
ggctatacaggacaccactgtgagttggagattgatgaatgcctgtctgatccatgcaag
aatggtgggacctgcacagatcgaccaggatcctttgcctgtcattgtcctgagggtttc
attggaactcagtgtgaaacggaagtggatgcctgtgaatcaaacccttgtcggaacgga
ggagattgcgaaaattacagtggctcctacctgtgtgtctgcccagagggcttctttggc
taccattgtgaaatagctagtgacccctgtttctccaacccctgtgggagcagaggctac
tgcctgcccagtaacggatctcacatctgtacctgcaaagtgggctatacaggcaacaac
tgtgagaaagagctgctgccaccaacgtcattaaaggtggaaaaggtggaggagacaggg
ctgacaatctcttggcgccctcccatggacccggctgccaagcaaatgattgatggctac
gccgtgacgtacgtatccttcgacggctcttaccgctggactgattatgtggaccgaagc
cgtgctgcccaccatttgcgggcactagcctccggcaaagcctacaatatttctgtcttt
tcagtcaaacgcaaatcgaacaacaagaatgatatcagcaggcccgtcatgctcgtcact
cgtactagacctcacccagtggagggatttgaaattgccaatgtgactgctacaaccatt
actgtgcaatgggctctccataggctcaagtacgctacggtcagcaaggtgcgtgtgtcc
atacggcagccggatgatgtggaggatcgtgctgtggagttaaacaatacagtgacaaaa
tacacattctgggaccttcagccagggcagaagtatcttattcacatgtggaccttgagt
ggcctcagtgcagaagaccatcccactgagagctttgctactgcacccgtctacgtgtgg
acacgacctcttcctcctagaaacctcacggcatccagagtcacagccacctctgttcag
atggtctgggaacagcccctggttggcacggtggaaggttacataatcaatgtcaccacc
agtcaaagtgtgaagagccgctatgtgcccaatgggaagctgtcttcctacacagtgcgt
gacctgaacccaggtcaaagatatcgcttatcagtgatggctgttcaaaacacagatcaa
ggacaagtaactagcgagcctgcccacctgtacattacggccttgcagaaggatggcacc
ccagaaaggcgctggagccaaacagggcatccccgtgtgctgagaaaccgggtccccccg
gcattcctgccagaactgcgtctgcttgctgatcacaatgcccctgaggaaccctcacaa
gcacctaggtttacagagctagtggatggcagagggaggatcaccactaaattcagcaac
ttgcccagtagatctgtcactgtgagaacacaacctgaggctcccatgaaagtggaagaa
aatggggaggaatcaaccaaacaggtcagccaggcactgcatctatcagaacctgagaac
agcaagagggaaagtggcaagcaaaactgttccataaacttctgccaaaatggagggacc
tgtgttgctggcccagagtcttatcactgcgattgcaatcctggattcaagggcagacaa
tgtgaactagcctgcaagaaggtgcctcagtcttgtactcggctttactcagaaaccaaa
tcctttccagtctgggaaggaggtgtctgtcattatctatacaagaggatctacaaagtg
caccaggatgtctgctacaaggagagctgtgagagcactgtttcaaataaggcacacagc
agaaaacaaagtaacagacactga
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