Podarcis raffonei (Aeolian wall lizard): 128414554
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Entry
128414554 CDS
T09310
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128414554 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128414554 (COPB2)
Membrane trafficking [BR:
praf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128414554 (COPB2)
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128414554 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
128414554
NCBI-ProteinID:
XP_053245957
LinkDB
All DBs
Position
5:complement(68582140..68600999)
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSSVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVATAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNTSMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYIKATQTDLRPANKYPLVTPNEERNILEEAK
GFTPKIGEALQDSEEEELVPKPVIVPPVAGKDPIETIKDEKALLELDEDLDNLDLEDIDT
TDINLDEEMSD
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcgacttgacataaagcgtaagctaacagcgcgatctgatcgagtgaagagt
gtggacttgcatcccacggagccatggatgttggctagcctttacaatggtagcgtctgt
gtttggaaccatgaaacacagacattagtgaagacttttgaagtatgtgacctaccagtg
agagcatctaaatttgtggcaagaaaaaactgggttgttacaggagccgatgacatgcaa
attcgggttttcaactacaacactttggaaagggttcacatgtttgaagcacactcagat
tatatccgctgcattgctgtgcatcctacacaacctttcattctaactagcagtgatgac
atgcttattaagctgtgggactgggataaaaaatggtcctgttctcaagtgtttgaaggg
cacactcattatgtgatgcagattgtcatcaatcctaaggataataatcagtttgctagt
gcctccttggacagaacaatcaaggtgtggcagcttggttcttcatcacccaacttcact
ttggaaggccatgagaaaggtgtaaattgcattgattactacagtggaggtgataagccg
tacctaatttctggagcagatgaccgcctagtaaagatctgggactatcagaataaaaca
tgtgtgcaaactcttgagggtcacgcacaaaatgtgtcctgtgtcagtttccaccctgag
cttcccatcatcatcactggctctgaagatggaactgttcggatttggcattcaagcact
taccgtttggaaagtactctgaactatggcatggaaagggtgtggtgtgtggcgagcctg
agaggatcaaataatgtggctctgggatatgatgaaggtagcatcattgttaagcttggc
cgtgaagagccagccatgtcaatggatgctaatggcaagatcatttgggctaagcattca
gaaattcagcaagctaatctgaaagcaatgggggatgctgaaatcaaagacggagagcga
ctgccacttgctgtgaaagatatgggcagctgtgaaatatatcctcagactattcagcac
aatcccaatgggcggtttgtagtagtgtgtggggatggtgaatacatcatttacacagct
atggcactgagaaacaaaagttttggttctgctcaggagtttgcatgggcacatgattct
tcagagtatgcaatcagggaaagcaacagcagtgtcaagatatttaaaaacttcaaagag
aagaagtcttttaaacctgactttggagcagaaggtatctacggcggtttcttgctgggt
gtccgatctgtcaatggcctggcattttacgactgggaaaatacagaattgatacgcaga
attgaaatccagcccaaacatattttctggtctgactctggtgagctcgtctgcatagcc
actgaagaatctttcttcattctgaagtacctttctgaaaaagttgcaacagcccaagag
acacacgagggagtcactgaagatggcattgaagatgcctttgaggtccttggtgaaatc
caagagattgtgaaaacggggttgtgggtaggcgactgttttatttataccagttctgtg
aacagactgaactactatgttggaggagaaatcgtcaccattgcacatttggaccggaca
atgtatttacttggatatatccccaaagacaacaggctttaccttggtgacaaagaactg
aacatagtgagttactccttgctagtctctgtgctagagtatcaaactgccgtgatgagg
agagacttcagtatggctgacaaagttcttcccacaattccaaaggaacagaggaccaga
gttgcacacttccttgagaagcagggcttcaaacagcaagcactcgcagtatccacagac
ccagaacaccgctttgagcttgctcttcagcttggtgaacttaaaattgcatatcagctt
gcagtggaagcagagtctgagcagaagtggaagcagctggctgagcttgctatcagtaaa
tgccagtttggccttgcccaagagtgtctgcaccatgcgcaagactacggtggcttactg
ctgttggccacagcttcaggaaatactagcatggtgaacaagctggctgaaggggcagaa
aaagatgggaagaacaatgttgcatttatgagctacttcctgcaaggaaagcttgacagt
tgtcttgagctgttgattaaaaccggacgcttaccagaagctgctttcctagcacggaca
tatttgccgagccaagtttcaagggttgtaaaactatggagagaaaatctctctaaagtc
aaccagaaagctgcagaatcgctggccgatcccacagaatatgaaaacttgttccctgga
ttaaaggaagcttttgttgctgaagaatacatcaaggcaacacaaactgatttgcggcca
gccaataaatatcccctagtcactccaaatgaagagcgaaacatactggaagaagctaaa
ggtttcacaccaaaaataggggaagcattgcaggattcagaagaggaagaactagttcct
aagcctgtgatagtgcctccggttgcagggaaggacccaattgaaacaataaaagatgaa
aaggcattattggagctggatgaagacttggataacttagacctggaggatattgatact
accgatattaatttggatgaagagatgtctgactga
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