Podarcis raffonei (Aeolian wall lizard): 128414617
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Entry
128414617 CDS
T09310
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128414617 (TRPC1)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128414617 (TRPC1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
Dsc3_C
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
128414617
NCBI-ProteinID:
XP_053246155
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Position
5:74521761..74548809
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AA seq
783 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDFYMVKKLLEENSS
GDMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRTSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVG
CECTLCTAKNKKDSLRHSRLQFRLDIYRCLASPALIMLTEEDPILRAFELSADLRELSLV
EVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLLEERMNLSRL
KLAIKYNQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTFKKILTVLTVGIFWPILSLCYLL
APKSQIGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPELERIDYLLLFW
LIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHNFAERKDWD
AFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFS
FTIGLTQLYDKGFTVDEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTR
FSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLS
YFDDKCTLPPPFNIVPSPKTICYLFNSLSKWIGSHTSSGKVKRQNSLKEWRNLKQKRDEN
YQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAIFY
QRN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctttaccagagcgcggacccgtcggcctcggcctcccctaacaagctgctg
gcgctgaaggatgtccggcaggtgaaggaggagaccaccttggacgagaagctcttcctg
ctcgcctgcgacaaaggtgacttttacatggtgaagaaacttttagaagagaatagctct
ggtgatatgaacataaattgtgtggatgtgcttgggagaaatgctgttaccataactatt
gaaaatgaaaatctagacatactacagctgctcctggattatggctgtcagtctacagat
gcactcttggtggccattgactcagaggttgtgggagctgtagatatactccttaatcat
cgacccaaacgaaccagtagaccaacaattgttaaattaatggaacgtattcagaatcca
gaatattcaacaacaatggatgtggcaccagtcattttagctgctcaccgtaacaactat
gaaattctcactatgctattaaagcaagatgtgtcactacccaaacctcatgctgttggc
tgtgaatgtacattatgtactgccaagaacaaaaaagatagccttcggcactccaggtta
caatttcgtcttgatatttatcgatgtttggccagtcctgccctaataatgttgacggag
gaggatccaattctgagagcctttgaacttagtgcagatttaagagaactcagccttgtc
gaagttgaattcagaaatgattatgaagaattagctcaacagtgtaaaacctttgctaaa
gatttgcttgcacaagcacggaattctcgggagcttgaagttatactcaaccatacagca
agtgatgagcatgtggataaaagggggctgttagaagagagaatgaacttgagtcgccta
aagcttgctattaaatacaaccaaaaagagtttgtttctcagtctaattgccagcaattt
ctcaatactgtctggtttggacaaatggctggttaccgtcgcaagcacacgtttaagaag
attttgactgtcctgacagttggcatattttggccaatactgtctctttgttacttgttg
gctccaaaatctcaaataggccgaataattcacactccatttatgaagtttatcattcat
ggagcatcatatttcacatttctgctcttgcttaacttgtactcacttgtctacaatgaa
gataaaaaaaataccatggggccagaattggagagaatagactatcttctactattttgg
ctaattggaatggtgtggtcagatgttaaaaggctctggtatgaaggcttagaagacttc
ttagaggaatcccgaaatcaacttagttttgtcatgaattctctctatttggcaactttt
gctctcaaagtagttgcccataacaagttccataattttgctgagaggaaggattgggat
gccttccaccctaccctggtggcagaaggtctgtttgcttttgccaacgttctgagttac
cttcgacttttcttcatgtatacaacaagctctgtcctaggcccacttcagatttcaatg
gggcagatgttgcaggacttcggaaaatttcttggaatgtttcttcttgtgttgttctca
ttcaccattgggttgacccaactgtatgataaagggttcactgtggatgaagaaaaggac
tgtgctgggattttctgtgagcagcaaagcaatgataccttccactcatttattggcaca
tgctttgccctgttttggtacatattctctcttgcacatgtagccatttttgtcacgaga
tttagctatggcgaagaactacagtcttttgtgggtgctgttattgttggcacatacaat
gtagtagttgtaattgtccttaccaagctcttggtggcgatgctccataaaagctttcag
ctgatagcgaatcatgaagataaagaatggaaatttgctcgtgccaagctctggcttagc
tatttcgatgataaatgtacgctaccaccccccttcaatattgttccatctccaaagact
atatgctacctatttaacagcctcagtaagtggatcggctctcatacatcatctggcaaa
gtcaagcgacagaatagtttaaaggagtggagaaatctgaagcaaaagagagatgagaat
taccaaaaggtaatgtgctgtctagttcatcgttatttgacttccatgagacagagaatg
caaagcactgatcaagcgactgtagaaaatctcaatgagctgcggcaagacttatcaaaa
ttccgaaatgaaatgagagacctgcttgggttccggacttcaaagtatgctatattttat
caaagaaactag
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