Podarcis raffonei (Aeolian wall lizard): 128414796
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Entry
128414796 CDS
T09310
Symbol
FXR1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128414796 (FXR1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128414796 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
128414796 (FXR1)
mRNA cycle factors
Stress granule specific factors
128414796 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
128414796
NCBI-ProteinID:
XP_053246590
LinkDB
All DBs
Position
5:91792397..91834622
Genome browser
AA seq
678 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFIEVRLPPPPDIKKEIG
EGDEVEVYSRANEQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKP
VNKNTFFKCAVEVPEDLREACANESAHKDFKKAVGACRIFYQAETAQLIVLSASEATVKR
VNILSDMHLRSIRTKIMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDTGTFRIYGESAEAVKKARSYLEFVEDFIQVPRSLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYTTDENNPSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGDDDRESRHQRDSRRRPPGGRGRSVS
GGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRR
TDEDAVLMDGMTESDTASVNENGLDDRDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISR
AESQSRQRNLPRETLAKTKKEMTKDVIEEVGLSEKAINGPAVISETEPSNLQHSPEERPS
TVQEDGNKQDEAVLNGVS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggtggaagtgcgcggctccaacggggccttttacaagggattcatc
aaagatgttcatgaggattcactcacagttgtgtttgaaaataactggcaaccagaacgc
caggttcccttcattgaagtaagattaccaccaccacctgatatcaagaaagaaattggt
gaaggagatgaagtagaggtgtattcacgagcaaatgagcaagagccttgtggatggtgg
ctagcaaaagttcgaatgatgaaaggggagttctacgtcattgagtatgctgcctgtgat
gccacttacaatgaaatagtgacattcgaacgacttcggcctgtgaatcaaaacaaacct
gttaacaagaacacgttcttcaagtgcgcagtagaagttcctgaagatctgagagaagcg
tgtgctaatgaaagtgcccataaggattttaagaaagctgtaggagcctgcagaattttt
taccaggctgaaactgctcagctaatagtactgtccgccagtgaggcaacagtgaaaaga
gtaaatattctgagtgacatgcatttgcgcagcattcgaacgaagataatgcttatgtca
agaaatgaagaagcaacaaagcatctagaatgcacaaaacagcttgcagcagcatttcac
gaggaatttgttgtcagagaagatttaatgggacttgcaataggaacacatggtagtaat
atacagcaagccaggaaggttccaggagttactgcaattgagcttgaggaagataccgga
actttcaggatctatggagagagtgctgaggcagtaaaaaaggctagaagctatttggaa
tttgtggaggactttattcaggttcctaggagtcttgtgggaaaagttattggcaaaaat
ggcaaagttattcaggaaattgtggacaagtctggagttgtgcgagtgaggattgaagga
gacaatgagaacaaactgcccagagaagatggaatggttccgtttgtctttgtgggtact
aaagaaagcattgggaatgtccaagtgcttcttgaataccatattgcctatttgaaggag
gtggaacagctgcggatggagaggctccagattgatgagcagctacgtcagattggcatg
gggttcagaccttcatctaccagaggtcctgaaaaggaaaagggttataccacagatgag
aacaacccttcctctgtacaaggctccagatcctatagtggaagaggtaggggacggaga
ggccccaattacacctctggctatggaacaaattctgagctgtctaatccctctgaaaca
gaatcggaaaggaaagatgaactgagtgattggtcattagcaggagatgatgacagggag
agtcgacatcaacgtgacagcagaaggcgtccaccagggggaagagggcgcagtgtttct
ggaggtcgtggacgtggtggtccccgaggtgggaagtcctctataagttctgtgctgaaa
gacccagacagcaacccttacagtttacttgataacacagagtctgaccagactgcagac
acagacgcaagtgaatcacaccacagcactaaccggcgtaggcgatctcgtagacgaaga
actgatgaggatgctgtcttaatggatgggatgacagaatctgacacagcatctgttaat
gaaaatggcttagatgatagagacaaaaaaccccagcgacgcaatcgtagtcgcaggcgt
cgtttcaggggtcaggcagaagatagacagccagtaacagttgccgattatatatcaaga
gcagaatctcagagtagacaaagaaacctcccaagggaaacactggccaaaaccaagaaa
gaaatgacaaaagatgtgattgaagaagttggcctttctgaaaaggccataaatggccct
gcagttatttctgagactgagccttccaatttgcagcatagtcctgaagaaaggcctagt
actgtacaagaagatgggaataaacaggacgaagctgtgctgaatggtgtttcataa
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