Podarcis raffonei (Aeolian wall lizard): 128415109
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Entry
128415109 CDS
T09310
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128415109 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
praf02000
]
128415109 (ABCA4)
Transporters [BR:
praf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128415109 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
128415109
NCBI-ProteinID:
XP_053246949
LinkDB
All DBs
Position
6:complement(24286255..24387133)
Genome browser
AA seq
2401 aa
AA seq
DB search
MDSAVCKKITAKDFYSPSLGCCQCIRRMSFLRQVRLLLWKNWILRKRQKLRLLVELVWPM
SLFLILVWLRSANPLYRQHECHFPNKAMPSAGTLPWLQGIFCNMNNPCFKSPTRGESPGV
VSNYNNSILARVYKDAQELLLNAHATELGRLWEELRSMTQFMETMRTNPERIAGRGIRIQ
DILKNGENLTKFLREDARLPDMVVHHLMNAQVRPEQFAFGVPELTLKDIACSRALLNRFI
IFSSPGGFQAVHQAMCALSQEDLQKVEDSLYANTDFFKLFHLLPTVLDGNAQGADLQMWG
RVLSNVSQAVQELAHRPSVQDLLSTLQPLLRDGEPVSLWQLMSSLSDLLCGYPEGGGSRI
ISLNWYEDNNYKAFLGVDSTKKESIYVYDNTTTPFCNTLIQTMESNPLTKIAWRAMKPLL
MGKILFAPDSPAVHEILKNANSTFEELVRLRLLSKAWKEVGPQVWSFFQDSVQMNMIRDT
LQNPTVKGFLNEQLGSEGFTAEDVINFLYNGPPERRSEGMVNFDWRDVFSVANQALHMVH
EYLQCLALDKFEGHVDETHVTHRALSLLEENKFWAALIFPDLDPKTRLLPPHVKFKIRMD
IDSVEKTNKIKDRYWDPGPRADPVDDLRYIWGGFAYLQDMVEHGIIKTQTGVEVPSGIYL
QQMPYPCFVDDVFMVTLNRAFPIFMVLAWIYSVSMTVKSIVLEKELRLKEAMKNRGVTNG
AVWFTWFLDSFIMMAVSTFLLTTLITYGRVLHYSNPHLLFLFLLTFTTASIMQCFLLSTF
FSKANLAAACSGVIYFTLYLPHIVCFAWQDRLTFKLKIMVSFLSPVAFGFGTEYLSRYEE
QGLGLQWDNIRTSPLEGDQYSFLFSMEMMVLDGFIYGLLAWYLDNVFPGDYGIPRPWYFP
FQQSYWLGSGHPKAEKTTTVDDKGSEKEGSVNMKAEEEEMRKSMADEPDRGKTQADSPLK
KDGKEYKCKHKRKPEYIEQGKPEAEAKGKDEMTTNLHFEEEPSGLVPGVCIQNLVKIFPG
CSKPAVDGMTITFYEGQITAFLGHNGAGKTTTMSILTGLFPPTSGTILVGGKDIQTDLDS
IQQSLGMCPQYNILFNHLTVAEHILFYAQLKGRTREEAELEMEMMLEDIGLPHKRNEEAQ
NLSGGMQRKLSVAIAFVGEAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHM
DEADILGDRVAIISQGRLHCSGSPVFLKNSFGTGFYLTLVRKMKNIQDSGGKEATSCSLG
SKCSCSCSSCVPTNKAETVEQELDGDVNELNELIHHHVPEAKLIESIGQELIYLLPSKNF
KQRAYASLFRELEETLADVGLSSFGISDTPLEEVFLKVTAEADPGIQNAGAAQENGAAGQ
EEGAHQTAPAANGTSRMPVAQEGDGSGGKGSRQNKGCQLTFQQIKALFIKRFHHSTRSFK
DFLAQVCAPPLQSQGLLPGPCGVGGQPSILPPFFRGLSWPGAPPPGFFPYCLQIVLPASF
VLLALILTVIIPPFGEYPSLTLHPWIYGHQFTFFSNERPGSEQMVSLIDAFLNKPGFGNR
CLKRETLQNYPCVNASFAWKTPAVPYNIAALFQTNMWHPQNPSPSCKCSTRKKLTMLPEC
PLGAGGLPPPQRAQRSTEILQDLTHRNISDFLVKTYPTLIRSSLKSKYWVNEKRYGGISI
GGKLPILHVTGEQIVGFLRDLGQMMNITGGEATMAASKEMANFLKYMETEYNIKVWFNNK
GWHAMVSFLNIANNAILRANLQTGKDPEEYGITAINHPLNLTKEQLSEVTVLTTSVDAVV
AICVIFAMSFIPASFVLYLIQERMTKAKHLQFVSGVRPFVYWFTNFLWDIVNYAVSAGLV
VGIFIGFKKKAYTSPSNLPALIALLLLYGWAIIPMMYPLSCFFSIPSTAYVALSCINLFI
GINSSAITFVLELFENNPVLLQFNKTLKNILLVFPHFCLGRGLIDLAMNQAVTDVYARFG
EEHVLNPFRWDFAGKNMVALAVQGVVYFVLNLLSQHSFFSTGWFAQNTMVPVMDEDEDVA
EERQRILNGGSRMDILKLQELTKIYAGRHIPAVDRLCVGIRPGECFGLLGVNGAGKTTTF
KMLTGDTQVTSGDAVVAGHSILTHIFDVHQNMGYCPQFDAIDDLLTGREHLRLYANLRGV
PAAEVERVAEWGIQKLGLLMYADQLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMD
PQSRRFLWNSIVSVIRDGRAVVLTSHSMEECEALCTRLAIMVRGTFKCLGTIQHLKYKYG
DGYIISMKIKASKPGLPPDLSLAEHFIEVNFPGSIQREKHHNMLQYQICAYSLAKIFRLI
LSNKDNLNIEEYSVTQTTLDQVFVNFAKQQMEDEEIHLHPRAAGASREVKVTPAFYRKTT
A
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atggattcagctgtctgcaagaagataacagcaaaggatttctattctccaagtctggga
tgctgccaatgcataagaagaatgagtttcctcagacaggtcaggcttctgctatggaaa
aactggatactgagaaaaaggcagaagcttcgtcttctggttgaacttgtgtggcctatg
tccttgtttcttatacttgtctggctgaggagcgccaacccactctatcgccaacatgaa
tgtcacttcccaaacaaggcgatgccctctgcaggaactctgccgtggctacagggcatc
ttctgtaatatgaacaatccttgcttcaaaagcccaacccgtggagagtctccaggtgtc
gtatcaaactacaataattctattttagcaagagtgtacaaagatgctcaagaactattg
ctgaatgcacacgcaacagaactgggccgactctgggaagaactacgctccatgacccag
tttatggaaaccatgaggacaaatcctgaaaggattgcaggaagaggcatacgaatccag
gacatcctgaaaaatggggagaacctaactaagtttcttcgtgaagatgcgcgtcttcct
gacatggtggttcaccacctgatgaatgctcaagttagacctgaacagtttgcttttggt
gtcccagagttgactctgaaagatattgcctgtagccgggccctgctgaatcgcttcatt
atcttcagcagtccagggggcttccaagctgtgcaccaggcaatgtgtgccctttcccag
gaggacctgcagaaggtcgaggactctttgtacgccaacacagacttcttcaagcttttc
catttgcttcccaccgtgttagacggcaacgctcaaggtgctgatctacaaatgtgggga
cgagtgctttctaatgtctcccaagctgtgcaagagctggcacataggccgagtgttcag
gaccttttatcgaccctacagccgcttctgcgagatggggagcctgtgtccttatggcag
ctgatgagttctttatctgatcttctctgtggctacccagagggaggtggttccagaata
atctctctcaactggtacgaagacaataattacaaggccttccttggggttgactccacg
aagaaggaatccatttatgtttatgacaacacaaccactcccttttgtaacacattgatc
cagactatggaatcaaatcctttaaccaaaatagcctggagggctatgaaaccattattg
atggggaaaatcctctttgctccagattcacctgccgttcacgagatactgaagaatgca
aattccacatttgaggaacttgtgcgcctcagactcttgtctaaagcctggaaggaagtg
ggaccccaagtgtggagcttctttcaagacagtgtgcaaatgaacatgatccgggacact
ttgcaaaaccctacggtgaaaggcttcttaaatgagcagctgggttctgaaggtttcact
gcagaagatgtgatcaattttctgtacaatgggccaccagagagaagaagtgaaggcatg
gtgaactttgattggagggatgtcttcagtgttgccaaccaggctctgcatatggtccac
gagtacctgcagtgcttggctcttgataaatttgaaggccacgtggatgaaacccacgtg
actcaccgtgccctttctcttctggaggagaataaattctgggctgctctcatctttcct
gatctggacccaaaaaccagactgctgccgcctcatgtcaaattcaagattcgcatggat
atagattcagtggagaaaacgaacaaaatcaaagacaggtactgggatcctggcccaaga
gctgacccagtggatgatctgcgttacatctggggaggctttgcatatctgcaagacatg
gttgagcatggaatcatcaagacgcagactggagttgaagtgccttcagggatctacctg
caacaaatgccctatccatgctttgtagatgatgtcttcatggttactctgaaccgtgcc
ttccccatcttcatggtgcttgcttggatctactctgtctccatgacggtaaagagtatt
gtgctggaaaaagaactgaggctgaaagaggccatgaagaacaggggggtcactaacggg
gctgtctggttcacctggttcctagacagcttcatcatgatggctgtgagcacgtttctc
ctgacgactctcattacgtatggcagagtgcttcattacagtaacccccacctcctgttc
ctgttcctgttgaccttcaccacagccagcatcatgcagtgcttcttgctcagcaccttc
ttctccaaggctaatctggcagctgcctgcagtggcgtcatctactttaccctatacttg
cctcacatcgtttgctttgcctggcaggaccggctgacttttaagctaaagattatggtg
agcttcctttcacctgtggcatttgggtttggtacagaatacttgtcacgctatgaagag
caaggccttgggctacagtgggataacatccgaaccagcccactagaaggagatcaatac
agtttcttgttctctatggagatgatggttttggatggttttatctatggattgcttgcg
tggtacttggataatgtcttcccaggagactatgggataccacggccttggtatttccca
ttccagcagtcttactggctagggtcagggcacccaaaggctgagaaaacaacaactgtg
gatgacaaaggttcagaaaaggaaggcagtgtcaacatgaaggcagaagaagaagagatg
agaaagtccatggctgatgaacccgacagggggaaaacccaggcagacagcccgttgaag
aaggatggtaaagaatacaaatgtaaacacaaaaggaaaccagagtacatcgagcagggg
aagcctgaggcagaggcaaaaggcaaagatgaaatgactacaaacttgcactttgaagag
gagccttctggtctggtcccaggcgtgtgtattcagaacctggtgaagatcttccccggt
tgctctaagccagctgttgacggaatgactattacgttctatgagggtcagatcactgct
tttcttggccacaatggagctgggaagacaaccactatgtctatcctcacaggtctgttt
ccacctacatctggaacaatactggttggtgggaaagacatccagacagacttggactcc
atacagcagagtctaggcatgtgcccgcagtacaacatcttgttcaatcaccttactgtt
gcagaacacatcctgttttatgcccagctaaaagggagaaccagagaggaggcagaactg
gaaatggaaatgatgctggaggacataggccttccacataaaaggaatgaagaggctcaa
aacttatcaggtggcatgcagcgaaagctctccgtcgccatcgcgtttgtaggtgaagca
aaagtggttgtcctagatgaacccacttcaggagttgatccgtattccagacgatccatt
tgggacctcctgctgaagtatcgttcagggagaaccatcattctgtctactcaccacatg
gatgaggcagacatccttggcgaccgggttgctatcatttcccagggaaggctgcactgc
tcaggatcccctgttttcctaaagaattcctttggcacaggcttctatctcaccttagtc
cgcaagatgaaaaacatccaagacagtggaggaaaggaggctacctcttgcagcctggga
tccaaatgctcatgttcctgctccagctgtgtgcccacaaacaaagccgaaactgtggaa
caggaactggatggtgatgtgaatgaactaaatgaactgatccaccaccatgttccagaa
gccaagttaatagaaagtattggtcaggaacttatctatcttctacccagtaagaatttc
aaacagcgagcatatgcaagtctcttcagggaattggaggaaaccctggcagatgtggga
ctcagcagttttgggatctccgacacgccccttgaagaggttttcttgaaggttacagca
gaggctgaccctggaatacagaatgcaggagctgcacaagagaacggtgctgctggacaa
gaagagggagcccaccagactgctccagcagccaatggcacttctcggatgcctgtggca
caggaaggggatgggagcggcgggaaaggatcgaggcagaacaaaggttgccaacttacc
tttcagcagatcaaagcacttttcatcaaacgattccaccacagtacacgtagctttaaa
gacttccttgctcaggtatgtgctcctccattacagtcacaagggcttcttccaggccca
tgtggggtgggggggcagcccagtatactgcccccatttttcagagggctaagctggcca
ggggccccacctcctggcttttttccatattgcctgcagattgttctacctgccagcttt
gtgctcctggctctgatacttacagtaatcattcctccatttggtgaataccccagttta
actctccacccttggatctatgggcaccagttcactttcttcagcaatgagcggcctggc
agcgagcagatggtttctcttattgacgccttcttaaataaaccgggatttggaaatcgc
tgcttgaagagagagacccttcagaactacccttgcgttaatgcatcatttgcctggaag
acaccggctgttccttataacatagctgcccttttccaaactaatatgtggcatccccag
aacccctcaccatcctgcaaatgtagtactcggaagaaactcaccatgctaccggagtgt
cctttgggagctggaggacttcctcccccacagagagctcagcgtagcacagaaattctt
caggatctcactcatcgaaatatttccgatttcctggtgaaaacctatcccaccctcata
agaagcagtttgaagagcaaatactgggtcaatgagaaaagatatggaggaatctccatt
ggaggaaaactcccaatactgcatgtcactggagagcagattgttggttttctgagagat
cttggtcagatgatgaacataacagggggtgaagcaacaatggctgcctcgaaagaaatg
gcaaattttcttaagtacatggaaactgaatacaatattaaggtgtggtttaacaacaaa
ggctggcatgccatggtcagttttctcaacatagccaacaatgcaatcctgagagccaat
ctgcagactggcaaagaccccgaggaatacggcataactgctatcaatcatccactgaac
ctcacaaaggagcagctctctgaagtcactgtgctgaccacttcagtagatgctgttgtt
gccatctgtgtgatctttgccatgtctttcatcccagcaagctttgtcttataccttatc
caagaacggatgaccaaagccaagcaccttcagttcgtcagcggtgtgaggccttttgtt
tactggtttaccaatttcctttgggacattgtcaattatgcagtgagtgctggcttggta
gtgggaatattcattggtttcaaaaagaaagcatacacgtccccaagcaaccttcctgca
cttatcgcattgctgcttctatatggatgggccataattcctatgatgtacccattgtcc
tgcttcttcagcatcccaagcactgcctacgttgccttgtcttgcattaacctcttcatt
ggtatcaacagtagtgccattacatttgtcctggagctctttgagaacaacccagttctg
ctgcagttcaataaaacattgaaaaatatcctgttagtatttcctcatttctgcctgggt
cgtggactcattgacttagccatgaaccaagctgtgactgatgtatatgctcggtttggg
gaagaacatgtcttgaacccgtttcgctgggattttgctggaaaaaacatggttgccctg
gcggtgcagggcgtcgtctattttgttctgaatcttctgtcgcaacatagtttcttctct
acaggatggtttgcccaaaacacgatggtgcccgttatggatgaagatgaggatgttgca
gaggaaaggcaacgaatcttgaatggaggcagcagaatggatattttgaaattacaagaa
ctgaccaagatttatgcaggtagacacataccagcagtggacagactctgtgttggcatt
cgtcccggagagtgcttcggtctcttgggcgtgaacggagctggcaagacaacaacattc
aaaatgctgactggagacactcaagtaacatctggagatgctgtagttgccggtcacagc
atattgactcacatatttgatgttcatcaaaacatgggatactgcccacagttcgatgcg
attgatgacctgctcacagggagagagcacttgcgtctttatgccaatctgcgtggtgtc
ccagcagcagaagttgagagggttgcagagtggggaattcagaagcttggtctcctgatg
tatgcagatcagttggcaggcacatacagcggtgggaacaagcgcaagctctccactgcc
attgcgctgataggctgtcctcctttagtcctgctggatgagccaactacaggaatggac
cctcagtcccgacgcttcttatggaactcaattgtcagtgtgatcagagacggaagagct
gtggtccttacatcacacagcatggaagaatgtgaggcgctctgcacacgtctagccatc
atggttaggggaaccttcaaatgcctgggcaccatccaacatctcaagtacaaatacgga
gatggctacattatcagcatgaaaataaaggcctctaaacccggactgcctccagacctg
agcctagctgaacacttcatagaagtgaacttccctggcagcatacaaagggaaaagcac
cataacatgctccagtaccagatatgcgcctactcgctggccaagatcttccggctgatt
ctctctaacaaggacaacctgaatattgaagaatactctgtcacacaaaccaccctggat
caggtttttgtgaactttgctaaacaacagatggaggatgaggaaattcatctccaccct
cgtgcagcgggagctagtagagaggtgaaggtgacccctgctttctatcggaagacaact
gcatag
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integrated database retrieval system
