Podarcis raffonei (Aeolian wall lizard): 128415281
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Entry
128415281 CDS
T09310
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010
MAPK signaling pathway
praf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128415281 (CACNA1E)
04020 Calcium signaling pathway
128415281 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128415281 (CACNA1E)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128415281 (CACNA1E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
128415281
NCBI-ProteinID:
XP_053247290
LinkDB
All DBs
Position
6:7258871..7743559
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AA seq
2424 aa
AA seq
DB search
MMFSLGTCSLSAHMLPESGSYPPGGSPELDSDSQRCMLALPEEEAWRKHRLGLMQPAQSC
SLLEPETLTDTLVSRTTSFDGLYELRSQERESSLGLEGGSTLDVGQSQLIPVSPEVIKRR
RGGLIEQRDIIKAHEAHKMQSTPQARRKEWEMARFGEAMAGRLGSGDGAAEQNRNRQGAP
APSGGTPVAYKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKYAKKLIDWP
PFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFV
FHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQI
VLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACYVNNSGELQELDPPHPCG
VQGCPAGYECREWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWNWL
YFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDK
AEEVMLAEENKNSGTSALEVLRRATIKRNRTEVMNRDSSDERVDISSVGTPLARASIKSA
KLDGASYFRHKERLLRISVRHMVKSQVFYWLVLSIVALNTACVAIVHHSQPPWLTHLLYY
AEFIFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDCGVTVGSIFEVVWTIFRPGTSFGISV
LRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFN
FMDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSSIYFIILTLFG
NYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSGPNMPAIERDR
RRRHHMSMWEPRTSNLRERRRRHHMSVWEQRTSQLRRHMQMSSQEGINKDDPSLLNPHAN
AFRRRRLLENSGLEKNEEERAERSERANEEGPALQIPGSNPCPGSKEDQKSAWHHKSFHG
NCDLNEQEGGASVTFEDRARLRQSQRRSRHRRVRTEAKENRSASQEAGPEAVSPAEGEQN
QEQKKNEEEKEGLIEKEPVVGEELKRTNEAPAKDAEFAAAPQEPSPSEDRLELDKGKDAS
PTEQDGSSLDTSEQALLGDLPRETGRTISRSEPDLSSVTTNLEKATESTTIMIDVQDSAV
VQISNKTDGEASPLKEAETKEEEEAEAEKKKKKQKKKKPVGKPMVPHSSMFIFSTTNPIR
RVCHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFTFEMVI
KMIDQGLILQDGSYFRDLWNILDFIVVVGALMAFALATNKGRDIKTIKSLRVLRVLRPLK
TIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEK
DCIGHYVDHEKNTMEVKCRKWKRHEFHYDNIMWALLTLFTVSTGEGWPQVLQHSVDVTEE
DRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACI
DFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYE
LALKYLNIAFTMVFSLECVLKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNT
SSFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
VFGNIKLDEESHINRHNNFRSFLGSLMLLFRSATGEAWQEIMLSCLEGKGCESDTTATSG
QNENERCGTNLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRI
WAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDNTVHFSS
TLMALIRTALDIKIAKGGADWQQLDSELQKEILTIWPHLSQKMLDLLVPMPKTTDLTVGK
IYAAMMIMDYYKQSKAKKQRQQLEEQKNAPMFQRMEPSSLPQEIISNAKALPYLQQDTLS
GLSSRSGFPSLSPLSPQEIFQLACMDPSHGEYQEQQSLEPEVREFKRVQPSNCGSYLPVD
TQERAVSGRASSMPRLTVDPQVVTDPGSMRRSFSTIRDKRTNTSWLDEFSMERSSENTYK
SRRRSYHSALHLSSRRLNTDSGHRSDTHRSGGRERGRSKERKHLLSPDISRCNSEERSPQ
ADGDSPERQQSRSPSEGRSQTPNRQGTGSLSESSIPSLSDTSTPRRSRRQLPPVPPKPRP
LISYAAMMQHCGDISPQPDDSEGGSPLLSGVLETNNTCLTESSSSPQGKQSLLSTPQRYI
SEPYLMLQDDSHASDCGEEETLTFEAAVATSLGRSNTIAAGPRSRHSWQMPNGHYRRRRR
GASQGVMCGAGIDVLSDTEEDDKC
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcagccttggcacgtgctctctcagtgctcacatgctccctgaatcaggctct
taccctcccggcggcagccctgaactggacagcgactcgcagaggtgcatgctggccctg
ccggaggaggaggcatggcggaagcaccggctgggtttgatgcagcccgctcagtcctgc
agcctgctggagccggagaccttgacggacacgctcgtctcgcgcaccaccagcttcgac
ggcctctacgaactgcgctcccaggagagggaatccagcttggggttggagggcggcagc
acgttggatgtggggcagagccaactcatccccgtgagcccagaagtcatcaagcgccgg
cgagggggcctgattgaacagcgggatatcatcaaggcgcacgaagcccacaagatgcag
agcacaccgcaggcgaggcggaaggagtgggagatggctcgctttggagaggcgatggct
ggcaggctgggatccggagatggagctgccgagcagaacagaaaccgccagggagcccct
gccccgtcgggggggaccccggtagcgtacaagcaaaccaaagcccaacgggccaggact
atggcactgtacaaccctatacccgtccgtcagaactgcttcacagtcaacagatctctc
ttcatttttggggaagacaacattgtcaggaaatatgccaagaagctgatcgactggcct
ccttttgaatacatgattctggcaaccatcattgcaaactgcatcgttctggccctggaa
cagcaccttcctgaagacgacaagacacctatgtctcggagattagagaagacagaacct
tatttcattgggatcttttgctttgaggctggcattaaaatagtcgctttggggttcgtt
ttccacaagggctcctacttacggaatggatggaatgtcatggatttcattgtggtcctg
agcggcatcctcgccacagcagggacccatttcaacacccatgtggacctgaggacgctg
cgggcagtgcgagtgctcagacccttgaagcttgtctcaggcattcctagtttacagatt
gtgctcaaatccatcatgaaggcaatggtgcctctcctgcagatcggtctcctcctcttc
ttcgccatcctgatgtttgcaatcattggcctggagttctacagcggaaagcttcaccgg
gcttgctacgtaaacaattcaggtgaattgcaagagttggacccgcctcatccctgtggg
gtgcagggatgccctgcaggttatgagtgcagagagtggattggtcccaacgacgggatc
acccagtttgacaacatcctctttgctgtgttgactgtcttccagtgcatcaccatggaa
ggatggactacagtgctgtacaataccaatgatgccttaggagccacctggaactggctg
tactttatccccctcatcattattggctctttctttgttctcaacctcgtccttggagtg
ctttctggggaatttgccaaagagagggagcgagtggaaaaccgccgggccttcatgaaa
ctgaggaggcagcagcagattgaacgggagctgaacggctaccgggcttggatagataaa
gcagaggaagtcatgctggctgaagagaacaagaattctggcacatcagcattagaagtt
ctcaggagagcaaccattaaaaggaatcggacagaagtcatgaatcgtgactctagcgat
gagcgtgtggatatctcttctgtcggcacccccctcgctcgggccagcatcaagagcgcc
aaactggatggcgcctcgtatttccgtcacaaggagcgcctcctgcgcatctctgtccgc
cacatggtgaaatcccaggtgttctattggctcgtcttgagcatcgtggccctcaacacg
gcctgtgtggccatcgtccatcacagccaacctccttggctcacgcacctcctctactat
gcagagtttatatttctgggcctcttcctcctagagatgtccttgaagatgtacgggatg
gggccccgactttatttccattcttctttcaactgctttgactgtggggtcacagtgggg
agcatctttgaagtggtttggacgatcttcagacctggaacctcttttgggattagcgtc
ttacgagccctgcgacttctaaggatatttaaaatcacaaagtattgggcttccttgagg
aatttggtggtctcactgatgagttctatgaagtctattatcagcctcctcttcctcctt
ttcctcttcattgtagtctttgccctgcttgggatgcagctctttggtggcagatttaat
tttatggatgggactccttctgcaaactttgacaccttccctgcagccatcatgacagtt
ttccagattttgacaggggaagactggaatgaagtgatgtacaatggaattcgctcccaa
ggtggcgtcagctcaggaatgtggtcatccatctacttcatcatcctcacactttttgga
aactataccctgcttaatgttttcttggccattgctgtggataacctagctaatgcgcag
gagctgacaaaggatgagcaggaagaagaagaggctttcaatcagaagcatgccttacag
aaagccaaggaagtcagtccaatgtctggtcccaacatgcctgctatagaaagagacagg
aggaggcgacaccacatgtcgatgtgggaaccgcgcaccagcaacctgagggagaggaga
aggaggcatcatatgtctgtgtgggaacagcggaccagccagctgcgccgccacatgcag
atgtccagccaggagggcatcaacaaggacgacccttctctgctcaaccctcatgccaac
gcttttcggaggagaaggctgctggagaacagcggcctcgaaaagaacgaggaggagcgg
gcggaaaggtcagagcgggcaaacgaagaagggccggccctgcaaatcccaggttccaat
ccctgcccaggcagcaaggaagaccagaagagcgcgtggcaccacaaatccttccacggg
aactgcgatctgaacgagcaggaaggcggagcgagcgtgacctttgaggacagggcccga
ctcaggcaaagccagaggcgtagccgacatcgcagggtgaggacggaagccaaggagaac
aggtcagccagccaagaggccggccccgaagcggtcagccccgcagagggagagcagaac
caggagcagaagaagaacgaggaggaaaaggagggcttgatcgaaaaggagccggtggtt
ggcgaggagctgaaaaggaccaatgaagccccagcaaaagatgccgagtttgcagcggcc
ccccaagagccaagcccctcggaagaccgccttgagctggacaaaggcaaggatgctagt
ccaactgagcaggacggcagcagcctggatacaagtgagcaggcactcctgggggacctg
cccagggagacaggcaggactatcagcaggagtgaacccgatctctcctccgtcacaacc
aacctggagaaagccaccgagagcaccaccatcatgattgacgtccaagactctgctgtg
gtacagattagcaacaagacagatggagaagccagccctttgaaggaggcagagacaaag
gaagaggaggaagcagaggcagagaagaagaagaagaagcagaaaaagaagaaacccgta
ggcaaacccatggtccctcacagctcgatgtttatcttcagcaccacaaacccaatccga
agagtctgccattacattgtcaacctgcgctattttgaaatgtgcatccttctggtgatt
gcagccagcagcattgccttggcagcggaggaccccgtcctgaccaactcagagaggaac
aaagtcctgagatattttgactatgttttcactggcgtcttcacctttgagatggttatc
aagatgatagatcagggattaatcctgcaagacggctcctatttccgagatctctggaac
atcctggacttcattgtggtggtcggagccctgatggcctttgccttggcgacaaacaaa
ggtcgggacataaaaactattaagtctctgcgtgttctacgagtcttgaggcctttgaag
accatcaagcggttgcccaaactcaaggccgtctttgactgcgtcgtaacttcgttgaag
aatgtcttcaacatcctcattgtctacaagctcttcatgttcatctttgcggtcatcgcc
gtccagctcttcaagggcaaattcttctattgtacggacagttcaaaagatacagagaaa
gactgcataggccactatgtggaccacgagaaaaacacaatggaagtgaaatgccgaaaa
tggaagcgccacgaattccactatgacaatatcatgtgggctctgcttaccctcttcact
gtctccaccggagaggggtggccgcaggttctgcagcattcggtggatgtgactgaggag
gaccgcggccccagccgaagcaaccgcatggagatgtccattttctatgtggtgtatttt
gtggtcttcccttttttctttgttaacatctttgtggctctcatcatcatcactttccag
gagcaaggagacaaaatgatggaggagtgcagcctcgagaagaacgagagagcatgcatt
gactttgccatcagtgccaaacccctcacccgctacatgccacaaaaccggcacaccttc
cagtaccgggtctggcactttgtggtctccccctcgtttgagtacaccattatggcgatg
atagcactgaacactgtggttctaatgatgaagtactattctgctccctacacctacgaa
ctagctctgaagtacctgaacattgcttttaccatggttttctcactggaatgtgtcctg
aaaattatagcttttggctttctgaattatttccgcgacacctggaacatcttcgatttc
atcaccgtgattggcagcattacagaaattatcttgacggacagcaagctggtcaatacc
agcagcttcaacatgagttttctgaagttgttcagggctgcccgtctcatcaaattgctc
cgccaaggttacaccatccgcattctgctgtggacttttgtgcagtccttcaaggccctc
ccctacgtctgtctcctgattgcaatgctcttcttcatttatgccatcattgggatgcag
gtttttgggaatatcaaactggatgaagaaagccacattaatcgtcacaacaatttccgc
agctttctgggctcactgatgctgcttttcaggagcgccacaggggaggcatggcaggag
atcatgctttcatgcctggaagggaaaggatgtgagtcggacaccacagcaacatctggg
cagaacgagaacgagcgatgtggcacaaatctggcatacgtatactttgtctcctttatc
ttcttctgctcctttttgatgctcaatctctttgtggctgtcatcatggacaattttgaa
tacctgactcgggattcctccatcttgggaccgcatcaccttgacgaatttgtccggatt
tgggcagagtatgacagagctgcgtgtggccgcatccattacactgagatgtatgaaatg
ctgactctcatgtccccaccactaggcctcgggaagagatgtccctccaaagttgcttat
aagaggctggtcctgatgaatatgccggtggccgaggacaacaccgtccatttctcctcc
accttgatggcgctcattcgaacagctttggacattaagattgctaaaggcggtgcagac
tggcaacagctggactccgagctccagaaagagattttgaccatctggcctcacctttca
cagaagatgctggacctgttggtgcctatgccaaaaactacggacctgacagttggaaaa
atctatgcagccatgatgataatggactattataagcagagtaaagctaaaaaacaaagg
cagcaactggaagaacagaaaaatgccccaatgttccagcgcatggagccttcctctctt
cctcaggagatcatttctaatgccaaagctttgccttacctccagcaagataccctttca
ggactgagcagcaggagcgggttcccttccctgagcccactctctccccaagagatattc
cagctggcttgcatggatccgtcccatggggaatatcaagagcagcaatctctggagcca
gaggttagagagtttaaaagagtgcagccctctaactgtggcagctacctcccggtggat
actcaggaacgagctgtatctgggagggcctcttccatgccacgcctgactgtggatccc
caggtggttacagatccaggctccatgcgacgctccttttctactattcgagacaagcgg
acgaacacctcctggttagatgagttctccatggaaaggagcagcgaaaacacctacaag
tctcgccggcgcagttaccattctgcactacacctgtcttcaaggcgcctcaacacagat
tcaggccatcgatctgacacacatcggtcaggaggcagagagcgaggccgatctaaggaa
cgcaagcacctactatctccagacatttcccgctgcaactcagaggaaaggagtccacag
gcagatggtgactctccagaacgacagcagtccagatctccaagtgaaggcaggtcgcaa
actcccaacagacagggcactggctccttgagcgagagttccataccatcactatctgac
accagcacgccaaggcgaagccgccgccagctccctcctgttccaccaaagccacgcccc
ctcatctcctacgctgctatgatgcagcactgtggagacatctccccacagcctgacgat
agcgagggtggctctcctctgctttctggggttctggagacaaacaacacctgcttgact
gagtcttccagctccccgcaaggaaagcagagccttctctcgacccctcagcgctatatc
tcagagccttacctgatgctccaggatgactcccatgcttcagactgtggtgaggaggaa
acgctcacctttgaggctgctgtggccaccagccttggccgctccaacacgattgcagca
ggccctcgctcgaggcacagctggcagatgccaaacgggcactaccggaggaggaggaga
ggggcgtcacagggggtgatgtgcggggctggcatcgacgtactaagtgatacggaagaa
gatgacaagtgctag
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integrated database retrieval system
