Podarcis raffonei (Aeolian wall lizard): 128415407
Help
Entry
128415407 CDS
T09310
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128415407 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128415407 (PRPF38B)
Spliceosome [BR:
praf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128415407 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
128415407 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128415407
NCBI-ProteinID:
XP_053247539
LinkDB
All DBs
Position
6:complement(20347870..20359081)
Genome browser
AA seq
569 aa
AA seq
DB search
MANNCPVVGAGNCHQQQQQHPQQSPQQQPGGQQQQQPPLPLPQAGAVLSPPLPLQSAGPK
PAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHV
EPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPF
IRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFST
LFPRIPVPVQKNIDQQIKARPRKIKKDGKEGVEEVDRHAERRRSRSPRRSLSPRRSPRRS
RSRSRHREGRGSSSFDRELERERERQRLEREAKERERRRSRSSDRALERRRSRSRDRHRS
RSRDRKGDRRDREREREKENERSRRKERDYEKERGVERERERSRERDRSREKSKDRKSKS
EIDERRHKDEKDERKHRDDKRDSKKERKHSRSRSRDRKHRSRSVSRNAGKHSRSRSKEKS
SKHKSESKEKSNKRSRSGSRGRTDSAEKSRKRDLSPTKERSRKRSKSKERSHKHDHSDKD
HSDKHDHQRSQSTERENQEKQSKNKDETV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaattgccccgtcgtgggcgccgggaactgccaccaacagcagcagcagcac
ccgcagcagtcgcctcagcagcagccgggaggccaacagcagcagcagccgcctctcccg
ctcccgcaggccggcgccgttttgtcgcctccgctgccgcttcaaagcgcggggcccaag
ccggcggcttcggggaagcagggcaacgtgctgcccctgtgggggaacgagaagaccatg
aacctgaaccccatgatcctcaccaacatcctctcctcgccctacttcaaggtgcagctt
tacgagctcaagacctaccacgaggtggtcgacgaaatctacttcaaggttacacatgtt
gagccttgggagaaaggcagcagaaaaacagcaggccagacagggatgtgcggaggggtg
cgtggtgttggaactggaggtatagtgtctacagccttttgcctcctgtacaagctattt
accctgaagcttacccgtaagcaagtgatggggttgataactcatacggactcccccttt
attagggcccttggattcatgtatattaggtacacacagcctccaactgatttatgggac
tggtttgaatcctttcttgatgatgaggaggaccttgatgtgaaagcaggtggcggctgt
gtcatgaccattggagaaatgctgcgctcttttctaactaagctggaatggttttctacg
ttatttccaaggattcctgtaccagtacaaaagaacattgatcaacaaattaaagccagg
cctagaaaaatcaagaaggatggcaaggagggagtagaagaagtagacaggcatgcggaa
cgtagacgttcaaggtctccaagaaggtccttgagccccaggaggtcacctagaagatca
agaagcagaagtcgtcatcgtgaaggccgtgggtcatccagttttgatagagaattggaa
cgggagagggaaagacaaagactagagcgagaagctaaggagagggagaggcgaagatct
cgaagttctgatcgggcattggagcgaagacgaagtagaagccgagataggcacagaagt
cgaagtcgtgatcgaaaaggagacagaagagacagagagagggagagggagaaagaaaac
gaacgtagtagaaggaaggagcgtgactatgagaaagagagaggtgttgaaagggaaaga
gagcgctctagggagagagatcgttctagagaaaaatcaaaggacagaaaaagcaagagt
gaaatcgatgagaggagacataaagatgaaaaagatgaaaggaaacatagggatgataaa
agagattccaagaaagaaaggaagcatagcaggagccgaagtagggaccggaagcatagg
agcagaagtgtgagtaggaatgctggcaagcacagtagaagcaggagtaaagagaagtct
agtaaacacaaaagtgaaagcaaagagaaatcaaataagcgaagcagaagtggaagcaga
ggaagaactgatagtgctgaaaagtcccgaaaacgagaccttagtcccactaaagagaga
tcacgaaaacgtagcaaaagcaaagaacgttcccataaacacgatcacagtgataaggac
cactcagacaaacatgatcatcagaggagccaaagtacagaacgagagaatcaagaaaaa
caatctaaaaacaaagatgagactgtatga
DBGET
integrated database retrieval system
