Podarcis raffonei (Aeolian wall lizard): 128415595
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Entry
128415595 CDS
T09310
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128415595 (MSH4)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
128415595 (MSH4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_28
Myb_DNA-bind_3
ComGE
AAA_30
Motif
Other DBs
NCBI-GeneID:
128415595
NCBI-ProteinID:
XP_053247995
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All DBs
Position
6:complement(34708912..34743398)
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AA seq
922 aa
AA seq
DB search
MEEVSAASTSFSAPSSSSPCAERRPRGLLGSEQAPAGRGGDPPSSSDEQPLRPQRDRGSR
SGFMAPFLSRGLEESYFGDKSSYAENISTVNLTSSSSTRALHISRVRKTPLSSSRTGCRN
GTPFMGYSVTSSSVSAHNAASVIVAVIEGRGLARGEVGMASIDLKNPEVVLSQFADNTTY
AKVITKLRILAPLEIIMSNTACDTGNATKLFSLITENFKNVTFTTVQRKYFNETKGLEYI
EQLCIPEFSTVLMEVQSKYYCLAAVAAVLKYVEFIQNSVYAPKSLKISFHGSEQTAMIDS
TSAINLELITNNRNPRNGHTLFGVLNYTKTPGGSRRLRSNILEPLIDADTINTRLDSVQE
LLQEEELFLALQSVISRFLDTDQLLSVLVQIPKQDTVNASESKITNLIYLKHTLELVEPL
KDALKSYKTPLLKAYYSSLEDNRFGVILEKIKTVINDDTRYTKGCLNMRTQKCYAVKPNI
NEFLDIARRTYTEIVDDIAGMIAQLAEKYNLPLKTSFGSARGFFIQMSADCAAIHNGQLP
SEFTKITKMKNVYSFTSQDLMKMNERCQESLREIYHMTYLIVCKLLSEIYEHIHCLYKLS
DAVSMLDMLQSFAHACTLSDYVRPEFTDTLAIKEGWHPVLEKISFEKPVANNTYITEGSN
FIIITGPNMSGKSTYLKQIALSQIMAQIGSFVPAEYSSFRIAEQIFTRIGMDDDIETNSS
TFMKEMKEIAYIIQNANDRSLIIIDELGRGTSAEEGIGICYAVCEYLLNLKAFTLFATHF
LELCQIDALYPNVENNYFEVQHVRSSYGSREKIAYTYVLSKGHTEEKNYGLKAAEVSSLP
PSIIQDAKEIITLISRQMSKQQRSTPETLKKKAIYHLANMLVQTARNSRLDPDSLRIYLK
GLKKKYETDCLAAEQVPTEDQQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtttcggcagcctccacctccttctcggctccctcctcttcttcaccttgc
gcggagcggcggccccgtggcctgctcgggtctgagcaggcgcctgctggccgcggcggc
gaccctccgtcttcctcggacgagcagccccttcgccctcagagagaccgaggctcccgc
agcggcttcatggcgcccttcctctcaagggggctggaagagtcatactttggagacaag
agttcctatgcagaaaacattagcacagtgaatttgacaagctcttcttcaacccgagct
ctacatatttctcgagtacgaaaaacacctctctcatctagtagaacagggtgcagaaat
gggactccttttatgggatattcagttacatcatcttcagtctctgctcacaatgctgca
tctgttattgtggctgtaatagaagggagaggtcttgccagaggtgaagtggggatggca
agtattgacttaaaaaatccagaagttgtgctatctcagtttgcagacaatacaacatat
gccaaggttatcactaaactcagaattttagcacctttggaaatcatcatgtcaaatact
gcatgtgatacaggaaatgcaacaaaattgttcagcttgataacagaaaatttcaagaat
gtgactttcactacagtccaaagaaaatacttcaatgaaacgaaaggcttggaatatatt
gagcaattatgtatacctgagttcagcactgttctgatggaagttcagtccaaatactac
tgtctggcagctgttgcagctgtgctgaagtatgttgagttcatacaaaattcagtttat
gcacctaagtcacttaagattagtttccatggaagtgagcaaacagcaatgattgattca
acgtcagccataaaccttgaattaataactaacaataggaatcctaggaatggacacact
ctttttggtgttctaaattatactaaaacaccagggggaagtcggagacttcgatctaat
attctagagcctttgattgatgctgataccattaatacaaggttggattctgttcaagag
ctacttcaggaagaggaactctttttggctcttcagtcagttatttcaagattcctggac
actgatcaactactttcagttttagttcaaattccaaagcaggatacggttaatgcatct
gaatcaaagataacaaatttaatttatctgaagcacaccctggaacttgtagaacctttg
aaggatgctttaaaaagctataaaacaccattgttaaaggcttactatagttctttggaa
gacaacaggtttggagtcatacttgaaaagattaaaactgtcattaatgatgatacaaga
tacacaaaaggatgcttgaatatgagaacacagaaatgctatgcagtgaagcctaatata
aatgaatttcttgatatagcacgaagaacatacactgagattgtggatgatattgcagga
atgatagcacaacttgcagaaaaatacaaccttcctttgaaaacaagcttcggttccgca
cgaggattttttattcagatgagtgctgactgtgcagcaatacacaatggtcaacttcct
tcagaatttaccaagattaccaaaatgaaaaatgtgtatagctttacttcacaagactta
atgaaaatgaatgaaagatgccaagagtctttgagagaaatttatcacatgacatacttg
atagtgtgtaaattactgagtgaaatttatgaacacattcattgcctgtacaaactctct
gatgcagtgtctatgctggatatgttgcagtcatttgcccacgcctgtacactttctgac
tatgtacgtcctgagtttactgacacattagcaataaaggaaggatggcaccctgttctt
gaaaaaatatcttttgagaaacctgttgccaacaatacttacatcacagagggaagtaat
tttatcataattacaggaccaaatatgagtggaaagtcaacttacctaaaacagatagcc
ctttctcagattatggcacaaattggatcttttgtcccagcagaatattcttcatttagg
attgctgagcaaatatttactagaataggtatggatgatgatatagaaacaaattcatca
acattcatgaaggagatgaaagagatagcatatatcatacaaaatgctaatgacagatca
cttatcataattgatgagcttggcagaggtaccagtgctgaagaaggcatcggcatatgt
tacgcagtctgtgaatatcttcttaatttgaaggcatttacactctttgccactcacttt
ttggaattatgtcaaattgatgccttatatcccaatgtggaaaacaattactttgaagtg
caacatgtgagaagtagttatggaagtagggagaaaattgcttatacttatgttctttct
aaaggacacacggaggaaaaaaactatggacttaaagctgcagaggtttcttctcttcca
ccatcaataatacaggatgccaaggagatcataactctgatttctagacaaatgtcgaag
caacaaagaagtactcctgagacattaaagaagaaggctatatatcacttagcaaatatg
ttagttcaaactgcccgtaactctcgactggatccagacagtttgcgaatatacctaaaa
ggtctgaagaaaaagtatgagactgattgccttgctgctgaacaagtacctactgaagac
cagcaataa
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