Podarcis raffonei (Aeolian wall lizard): 128415672
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Entry
128415672 CDS
T09310
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04136
Autophagy - other
praf04140
Autophagy - animal
praf04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128415672 (ATG4C)
04140 Autophagy - animal
128415672 (ATG4C)
04136 Autophagy - other
128415672 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128415672 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128415672 (ATG4C)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128415672 (ATG4C)
Peptidases and inhibitors [BR:
praf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
128415672 (ATG4C)
Membrane trafficking [BR:
praf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128415672 (ATG4C)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128415672 (ATG4C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
128415672
NCBI-ProteinID:
XP_053248191
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All DBs
Position
6:complement(39159448..39184994)
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AA seq
459 aa
AA seq
DB search
MEAAGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEESSDTSP
NGSSYDITDEGISRNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLILHFLGRDWTWPDAFVIENSDSESWTSHTVKKLTASLEASRTGEKEFRNQSSHHKQ
APGGNWGNRERRDEHFHRKIISWFGDSPLANFGLHRLTEYGNKSGKIAGDWYGPAVVAHL
LRKAVEESKDPELQGITVYVAQDCTVYKSDVIDTQCSFADSEKSDAKSVIILIPVRLGGE
RTNMEYLEFVKGILSLEYCIGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSVKDF
PLESFHCPSPKKMSFKKMDPSCTIGLYCPNVQAFERASEEITKILKTSSKENYPLFTFVN
GHSRDYDFLMSPVLEERTLFSEDENKKLKCFSTEDFVLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcagggacagatgaagtagagaaaataaaatcaaagtttatgtctgcatgg
cataatatgaaatacagctgggtgttgaaaacaaaaacttactttagcagaaattctcct
gtctttttgctgggaaaatgctaccatttcaagactgaggagtcaagtgacacgtcacca
aatgggtcaagttatgatataacagatgaagggatttcaagaaatgtggaagagttccgt
aaagattttatttccagaatatggctgacatacagagaagaatttcctcaaatcaagggc
tcagctttaacaacagactgtggctggggctgtaccctgaggactggccagatgcttcta
gcacaaggacttattcttcactttcttggtagagactggacgtggccagatgcatttgtc
attgaaaattcagactctgaatcatggacaagtcacacagtaaaaaagctcactgcatcc
ctcgaagcatcacgtacaggagagaaagaattcaggaaccagtcaagccaccacaagcaa
gccccaggggggaactgggggaacagagaaaggagggatgaacactttcatcgaaaaata
atatcgtggtttggcgattctccacttgcaaattttggcttgcatcgcctaacagaatat
ggaaacaagtctgggaaaatagctggagattggtatgggccagctgttgtagcacacctt
ttgagaaaagctgttgaagagtcaaaagaccctgagttacaaggaataactgtctacgtt
gctcaagattgtacagtttacaagtccgatgttatcgatacgcagtgctctttcgcggat
tctgaaaaatcggatgccaaatctgtcatcatattaattcccgtgaggctgggaggagaa
agaaccaacatggaatacctagagtttgtgaaggggattttgagtcttgaatactgcatt
ggtattattggtggcaaacctaagcagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccagtcttttgtagatgtcagcgtaaaggatttc
cccctcgagtcattccactgcccttctccaaagaagatgtcttttaaaaaaatggatcct
agctgcactatagggttatattgtccaaatgtgcaagcctttgaaagggcttctgaagaa
ataactaagatcctgaaaacctcatctaaggagaactaccctttgtttacctttgtaaat
gggcattctagagactatgattttctgatgagtccagtcctggaagagagaacccttttc
tctgaggatgaaaacaaaaagttgaaatgttttagtactgaggactttgtcttgctgtga
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