Podarcis raffonei (Aeolian wall lizard): 128415683
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Entry
128415683 CDS
T09310
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128415683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
praf04091
]
128415683
Lectins [BR:
praf04091
]
C-Type lectins
Lecticans
128415683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
128415683
NCBI-ProteinID:
XP_053248217
LinkDB
All DBs
Position
6:40159276..40279246
Genome browser
AA seq
2156 aa
AA seq
DB search
MEIMNAFVALTIFIVLENLEPLRGAKLVLVNKEIHVERGRAAYITENELQFNISNERDSC
KVEVVLNEPVTQRVGKLTPHVFDCHFLPNEVKYIHNGCPLLNEDRVMLRVYRFTELETAV
EMFTLHITIRSPKPSLVQFGQASLEVPEFFGISQPIDRNILTFKYNGLGKACTVRILSSE
LLFPAVGQVVVEDSKIQKSEDVSTYTKQKKAGQSKPPCPSNGACHSGLKEIHLLKMSCED
FLEMRLRYQHLSPPSPDKDYISIQVEIRDKKSRFQLQAENVWIPVRIKGAIPNRQPQAAF
MSMFILEIDEFILTPLTTVTLDAEDEETPRERLLFNITKPPPQGYVTHLDDHSKAITSFT
WQDLYDTKVAFQPSNISHSERQNYEVEFQAIDSLFMNSFPIMVHFSIRSAVTNAPRVAWN
TGLDLLEGQSRPITWESLQIVDNDNLDAVQLLVVEGLYHGWLTIRGNKGFRFAVKDLRNE
VVRYHHDDSDTTKDDIVFRIFDEKHSARHRFPINILPKDDTPPFLVNNLVFELEEGSTVL
IENHMLMATDFDSSDDYILYKISKPPSAGELIKQHFPDGPGIPVFSFYQRDLFHGLIYYR
HFGGEIFQDSFEFNLADSQEPPNLSDPQIVMIHIMPVKDHLPEEVPGTIRHLVVKETEIV
HITKDHLHFTDAESPDSQLMYTVTKPCFSPASPGVYDAGKLIFTDSMKNFVKNSSLPFLS
SFTQHAITHMKVAYMPPLMEMGPDPLFVQFEFSVSDQQEGVMTGLLFNITVMPVDDEAPE
IFTNHLKIEEGTSAFITGEHLMVTDVDTKNSDIQIELKKLPLHGHVELHGLVMSEGDKFT
LWDLHSSKVRYQHDSSETLEDRIIFSATDGFNTADGTLRVQIIPVNDEPPELQPGLRSSL
ECLEGERVFITAEYLYATDADSEDSRLIYMIARAPKHGVIQKDGFVVEKFSQHDITQGSI
SYVHTGGEIGHSYLTDSVTLIISDGEAGTVDGCCGDTNFPPPVPLHPSLPVYDLNISVVP
INNQRPTIQTGEMFVVEEGSSACISLKYLDASDEDTTPEELTFFLETSPQYGYLENILPT
PGHEKSNAGVNISVFTFQSLQAGYINYVQSKHEHLEPSSDHFMVSVSDGFHKSLAMPFYI
IIDPVNDEIPSLQLRNLTVMEGDIKAMGPGTINVEDFDVPQDVLRFYIATPPRHGVILNG
IYGRDTGRYKQLSPAVLHKDLEIRSFTLEELKQGLMLMYMHDDTESLEDSFTIQLTDGKH
TVQGTLYIFILPVNDEIPHLSRNTGLEVEVHENKVISSVALEVEDKDSLRNQLHYVINNK
PRYGHLKLKTASAWSTLHPGMNFTQDDVDMNRLWYFHTNVLSPESHDSFRFFVTDGKNRS
PPESFYIFVKSVAKGDIVLFTKPVTLTEGDRVTLTTDVLMATDGTGKPGKLLYAISVPPV
HGQIEYINYPGVPISRYSQLDVVAQKVCYVHDNSHEATKDSFSFTISNGHTEKKGLLELN
IEHNDQIPPTLLTNKGLHIVEGSIGFLTSDMLQLTDVDSPVKNLTYIITQYPQYGHLYMG
ETVIYPGQFTQLDVDNAKVYYKHNGGGGHIDKFSFIATDKVNHGFLVSGQLTDASIEFTI
QVECQDKMVPKLIVKASPTTIQNLKDGRFAVPITVHNLKVTDANSRDEELVFSVRRHPFF
GHLENSGTGRLRQNSFTQHDLNQHNIRYILNPTTEVTSDTFEFEASDRAGNTIAPEILEI
KWSRIELAETCYRVCENIGSLPIKLQRTGESAEPSFVGIKVQEVSARVGLDFKHSTARLV
QFDPGVSIKIWNILLQDDGLEENTEVFKITLNKPKNAILGHKRELTVEILDPKAGDCDSS
TTFQDGGTQKMLERTSSNSGSLLSAGRSHKASERADVLHEEHLSNRNLPHNHHGSLARGY
IPQTGHLPDHVKMDFQVLADSKHQAVQHHPPMYQGITPTGAGGQFILPSAVRAAAREPVP
VLPFHLRHQSDLPQRDLGMKNEPVPLQSSTKQRTKSRKCPSSWTLRDKHCYILSSIRNAS
WDSAEKACRKWSQGHLASVHSPREMAWLWKFANKQPFWIGLNEGKTGSWMWSNGRPVTFH
NVKSGPELSKTAEQKCAFVKKQKKWVARLCRQRLKGRYICSLPSLTDTSLENTKTV
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atggaaattatgaatgctttcgtagcattgactatttttattgtccttgagaatcttgaa
cctctaagaggagccaagctggtcctggtgaataaagaaatccacgttgaaagaggacgc
gctgcgtacataactgaaaatgaactacagttcaatatttctaacgagagagattcttgc
aaggtggaggtggttttaaatgaacctgtgacacaaagagttgggaaacttacacctcat
gtatttgattgccatttcttacccaatgaagtgaaatacatccacaatggttgtccactg
ctaaatgaagaccgtgtgatgttgagagtatacaggtttacagaactagagaccgctgta
gagatgtttactcttcatataacaataagaagccccaaaccgagtcttgttcagtttgga
caagcgtctctagaagttccagaattctttgggatttctcagccaattgacagaaacatt
ttgactttcaagtacaacggtttaggtaaagcctgcacagtgaggatcttgtcgtctgaa
ttactgtttcctgctgttgggcaagtagttgttgaggactctaaaatacagaaaagtgaa
gatgtatcaacatacaccaaacaaaaaaaagctggacaatccaaaccgccttgtcccagc
aatggtgcctgccattcaggattgaaagaaatacaccttctaaagatgagctgtgaagac
tttctggagatgagacttaggtaccaacacctcagtcccccatcacctgataaggattat
atatccatacaagtagaaatcagagacaaaaagagcagatttcagctacaggcagaaaat
gtgtggattcctgtaaggataaaaggggccattccaaacagacaacctcaagctgcattc
atgtccatgttcatcttggagatagatgagttcattcttactcctctcacgacagtgact
ttggatgccgaagatgaagaaaccccgagggaaagattgctattcaacattactaaacct
cctcctcagggatatgttacccacctggacgaccactccaaggccattacgtctttcact
tggcaggatttgtatgatacaaaagttgctttccagccatctaatatctctcattctgag
agacagaactatgaggttgagtttcaagcaattgatagcctcttcatgaacagcttccct
atcatggtccatttttcaattcgaagtgcagtaacaaatgctcctagagttgcatggaac
acagggcttgacttgttggaaggacagtctcgtccaattacctgggagtctcttcagatt
gtagataatgataaccttgatgctgttcagcttcttgtggtggaaggcttatatcatggc
tggctcacaatcagaggtaacaaaggcttcaggtttgcagtgaaagatctcaggaatgaa
gttgtccgttaccatcatgatgacagtgatacaaccaaggatgacatagtcttcagaatt
tttgatgaaaagcacagtgctagacacagatttcctattaacattcttccaaaagacgac
accccaccattcttagtgaacaatcttgtctttgagttggaagaaggcagcacagttctt
attgaaaaccatatgcttatggctactgattttgattcgagtgatgattatatcctctac
aaaatatccaagccacccagtgctggagaacttattaagcaacacttcccagatggacca
ggtatccctgtgtttagcttttaccaaagagatctcttccacgggcttatttactaccgt
cattttggaggggaaatttttcaagactcgtttgagtttaacttagctgacagccaggaa
ccaccgaatctctcagatcctcagattgtgatgattcacatcatgccagtgaaagaccat
ttgccagaagaagtccctgggacaataaggcaccttgtggtcaaagaaacagagatagta
cacatcacaaaggaccacctccattttacagatgctgaatccccagacagccaacttatg
tatacagttacaaagccatgtttctctcccgcttcccctggggtgtatgatgcaggaaag
cttattttcacagacagcatgaaaaattttgtgaaaaattcttcccttcctttcctgtca
tctttcacacagcatgccataacgcatatgaaagtggcatacatgcccccattgatggag
atgggccctgacccattgtttgtacagtttgaattctctgtcagtgaccagcaggaagga
gtgatgactggtctcctctttaacatcacagtgatgcctgtggatgatgaagcacctgag
attttcaccaatcatctgaaaatagaggaaggtactagcgcattcatcactggagagcat
ctaatggtaacagacgtggacactaagaatagtgatatccaaattgaattgaagaaattg
cctttacatggacacgttgagctacatggacttgttatgtcagaaggggataaatttacc
ctttgggatttacactcttccaaagttcggtatcagcatgacagttcagaaacccttgaa
gacagaataatattttcagcaacagatggatttaacactgcagatggaacactgagagta
cagatcatacctgtaaatgatgagccaccagagctgcaacctggtttaagatcaagtctg
gaatgcctggaaggagagcgagtcttcatcacggctgaatacctctatgcaacagatgct
gacagtgaagactccagactcatctatatgattgccagggctccaaagcatggggttatt
caaaaggatggctttgtggtggagaagttctctcaacatgacatcactcaaggatccatc
tcctatgtgcacacaggaggagaaataggtcatagttatctgacggacagcgtaactttg
ataatctcagatggagaagctggaacagtggatggttgttgtggtgacacaaatttcccg
ccacctgtaccccttcatcccagtttaccagtgtatgatctaaacatctctgtggtgccc
attaacaaccagaggccaaccattcaaactggggagatgtttgtggtggaagaggggtcg
tcagcatgcatcagtttaaaatatctggatgcctcagatgaagacacaactccagaggag
ctaactttcttcttggaaaccagtcctcagtatggatacttggagaacattcttcctaca
cctggacatgagaagagcaatgctggagttaatataagtgtgttcacttttcagagtctc
caggctggttatatcaattacgttcagtcaaagcacgagcatttagaaccctcctctgat
cacttcatggtgtctgttagtgatggctttcataaatcgttggcaatgcctttctacatc
atcattgatccggtaaatgatgaaatcccaagcctgcaacttaggaacttaacagtaatg
gaaggtgacattaaggcaatgggtcctggcaccatcaatgttgaagattttgacgtccct
caagatgtgctgagattctacattgctactccacctcgccatggtgtgatactaaatgga
atttacggcagagatactggacgttacaaacaactaagcccagcagtactccataaagat
ttagaaatccgcagctttacactggaggaacttaaacaaggactgatgcttatgtacatg
catgatgacacagaaagcctagaggatagtttcaccattcagctgacagatggcaagcac
acagtccaagggacactttacatcttcatcctgccagtcaacgatgaaatccctcatctt
tccaggaacacaggcttggaagttgaagttcacgagaacaaagttatttccagtgtggca
ttagaagttgaagacaaagattctttgaggaatcagctccattatgtcataaacaacaag
ccaagatatggacacctgaaattaaagactgcatcagcttggagcactctgcatcctgga
atgaatttcactcaagacgacgtggacatgaaccgcctctggtatttccatacgaacgta
ctgagtccagaaagtcacgacagcttccgattttttgtgacagatgggaagaacagatct
ccaccagaaagcttctatattttcgttaaaagtgtggctaaaggtgacattgttctattc
accaaacctgtaactttaacagagggtgacagggtgaccttgacgacagatgttcttatg
gcaacagatggcactggcaaacccgggaagctgctgtatgccatttctgtgccacctgtg
catggtcagattgagtacatcaattatcccggcgtgcccatttcccgctacagccagttg
gatgtcgtggcccagaaggtttgctacgttcacgacaatagccacgaggctactaaggac
tcattcagttttaccatcagtaatggtcatacggagaaaaaaggcctcctagaattgaat
attgagcacaacgaccagattccgcctacactgctcacaaacaaaggactccatattgtg
gaggggagtataggttttttaacttccgatatgcttcagcttacagatgtagacagtcca
gtgaaaaacctcacctatatcatcacacagtatccacaatacggacatttatacatgggg
gaaactgtcatctaccctggccagtttacacagctggatgtggataacgcaaaagtgtac
tacaagcacaatggaggaggtggacacattgataaattctcatttatagctacggacaaa
gtcaaccatggatttttggttagtggacaactgacagatgcctccatagaatttacaata
caggtagaatgtcaagataaaatggttccaaaactcattgtaaaggcaagcccaaccact
atacaaaacctgaaagacgggaggtttgcagtaccgatcactgttcacaacttgaaagtc
acagatgccaatagcagagatgaggaactcgtcttcagtgttcggagacatcctttcttt
ggacatcttgaaaattctggaacaggccgtcttcggcaaaactcttttacacaacatgac
ttaaaccagcataatattcggtacatcttaaatcctaccactgaggtaacttcagatacc
tttgaatttgaagcttcagacagagcaggcaacactatagctccagaaattcttgaaata
aaatggtcccgtatagaactggcagaaacatgctatagagtctgtgaaaacattgggtct
cttcctattaagcttcaacgaacaggagagagtgcagagccctcatttgttggaataaag
gtccaagaagtatcagcaagagttggcttggacttcaaacacagtacagcgagattagtg
cagtttgatcctggtgtttccatcaagatctggaatatcctccttcaggatgatggcctt
gaagaaaacactgaagtgtttaaaataacactgaacaagcctaaaaatgcaatactggga
cacaagagggaactgactgttgaaattctcgatccaaaggctggcgactgtgattcttcc
acaacattccaagatggaggcactcaaaagatgttggaaaggactagtagcaattcagga
agtctgctgtctgctggccgttcccataaagcaagcgaaagagcagatgtccttcatgaa
gaacatctgagcaataggaatcttccccataatcatcatggttctttggccagaggatat
attccacagacaggacacctgcctgatcatgtaaagatggatttccaagttcttgctgat
tctaagcatcaagcagttcaacaccatcctccaatgtaccaaggaattacaccaacagga
gctggtggacaattcatcttgccatctgccgtcagggcagctgctagagagcctgtgcct
gttttaccttttcacctacgacaccaaagtgaccttcctcagagagatttgggcatgaag
aatgaacctgtcccattacagtcgagtacaaagcagagaactaaatccaggaagtgccct
tccagttggacgctcagagacaagcactgctacattttgagctccattagaaatgcatcc
tgggacagtgctgaaaaagcctgcaggaaatggtcccagggccatttagctagtgttcat
tccccaagggagatggcatggctttggaaatttgccaataagcagccattttggattgga
ttaaacgaaggtaaaacgggcagctggatgtggagtaatggccgaccagtgactttccat
aacgtcaaaagcgggccggagctaagcaagactgctgaacagaaatgtgcttttgtgaaa
aagcagaagaaatgggttgcaaggctatgcagacaaaggctgaaaggaagatatatttgt
tcccttccttcattaactgacacttctctcgaaaatacaaaaacagtttag
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