Podarcis raffonei (Aeolian wall lizard): 128415742
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Entry
128415742 CDS
T09310
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128415742 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128415742 (NDC1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128415742 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
128415742
NCBI-ProteinID:
XP_053248359
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Position
6:43071033..43086020
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AA seq
690 aa
AA seq
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MYECARIKHMCTNARIELMRVCATSLHASEILGWRAAASLAWSVLLLPLCIAAFISISSI
DFFHPVQWITSSFNDLYTSYVIFCILLMSVVILVISIFNVEFHAVVPSIPCSRLALISKI
IHPQQVIHSIAHAVMGMLVAWCAAVMTKGKFLFLSVPCTATESVADADLRVCLNEYHLFL
LLLGAFMGYSYSLRYLVNNLNYLPFPVIQQYKYLRFRRSLPLLAKHSCVESLYMVRNFCA
AYYFFGYIPRAWIITTMNLQTDSKLHPLDTMAGLLDFSLLYHSWLCGVFLLMTWYIAWLL
FRIYATEAHHFPVQPTFAEETDQCLPKILSSNPPPLIKFLALQDLMFLSQYSSVRRQEVF
SLSQPGGHPHNWTSISQECLKLLSDLTQKLIMHQEAAAANGRLKQQSVGDMRQPSSPPGA
AAEETSFHTPRSIMLPRTQMPSLVKSSLLPLKTSPSSDVRSNLGSPFTPLSRKAGVLDLN
SPWNGSVQSPHIMRRGPKLWTTSSDLQWTASSPEPYPMSAVAGGANVAVQPSFIYTWLQS
KKEQIKTFLSKRVLIMYFFSKNPEASIQALFSDTQMHIWALEGLSHLIAASFTEDRYGVV
QTTLPSILNTLLTLQEVVDKQFKLPHVSSKPPRISGSLADTSYKTLRFALRASLKTAIYR
IITTFGEHLNAVQVSAEVKKRLQQFLEFKE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaatgcgcgcgcattaagcacatgtgcacgaacgcccgaatagagctaatgcgt
gtttgcgcaacatcacttcatgcttcagagatcttgggatggagagcagctgcaagcctt
gcttggtcggtgctgctgcttcctctgtgtattgcagccttcatcagcattagcagcatt
gacttcttccacccggtacaatggatcacaagctcattcaatgacctgtatacctcctac
gttattttctgcatactgctaatgtctgtggtcatactggtaataagcatcttcaacgtt
gagtttcatgcagttgtgccttctattccttgctctcggttagctctgataagcaagatt
atccacccgcagcaagtgatccattccattgctcatgctgtaatgggaatgctggtagct
tggtgtgcagcagttatgacaaaggggaagtttctctttttatctgtaccctgcacagct
acagaaagtgtagctgatgctgatctgcgcgtgtgcctgaatgagtaccacctcttcctc
ttgcttcttggagcctttatgggttacagctatagccttcggtatctggttaacaatttg
aactaccttccatttcctgttatacagcaatacaagtacctgcggttcaggagatcactt
ccgttgcttgcaaagcatagttgtgtggagtcgctttatatggtcagaaacttttgtgct
gcttactatttctttggttatattccaagggcatggataattaccacaatgaaccttcag
accgatagtaaacttcatcctctggacacgatggctggtctcttggatttctcccttctg
taccacagctggctatgtggcgtgtttcttctgatgacttggtacattgcatggctgctc
ttcagaatctatgccactgaggcacatcactttcctgtccagccgacttttgcggaagaa
actgaccagtgtttacctaaaattttaagcagcaaccccccacctcttataaagttcttg
gctttacaggacttgatgttcctttcccagtattcttctgtgcgacgtcaagaggtcttc
agccttagccagccaggtggacaccctcacaactggacttcaatctcccaggagtgcttg
aaacttttaagtgatctgacacagaaactgataatgcaccaggaggctgcagctgcaaat
gggaggctgaaacagcaatctgtgggggacatgagacagccctctagccctccaggagca
gctgctgaagaaacatcatttcacactccaaggtccattatgcttcctcgaacccaaatg
ccttctctggtcaaatcatctctgttgcctttgaaaacatccccttcttctgacgtcaga
agcaatttagggtcacctttcacacctctgagtcgcaaggctggcgtgctggatttaaac
tctccttggaatggatctgtccaaagtccccatattatgaggagaggaccaaaattatgg
acaacaagttcagatctgcagtggacagcctcttctcctgaaccctacccaatgagtgct
gttgcaggcggtgcaaatgtagcagtacaaccaagttttatctatacgtggctgcagagc
aagaaagagcagatcaaaaccttcttatcaaaacgagtactgataatgtattttttcagc
aagaaccctgaggcttccattcaggctctcttttctgatacccaaatgcatatttgggct
ttggaaggtttgtcgcatctcatagcagcttcatttaccgaagacagatatggagttgtc
caaacaacactgccttctattctgaatacgttgctaactcttcaagaggtggtagacaag
cagttcaagcttcctcatgtttccagcaaacccccccggatttcaggaagtctggcagac
acttcctacaaaacccttcgatttgccttaagagcgtcgctgaaaactgcaatctatcgg
atcatcaccacttttggagagcacttaaatgccgtgcaagtatctgcagaagtcaagaaa
agactccagcagttcctggagttcaaggaatag
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