KEGG   Podarcis raffonei (Aeolian wall lizard): 128415742
Entry
128415742         CDS       T09310                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128415742 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:praf03019]
    128415742 (NDC1)
Messenger RNA biogenesis [BR:praf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128415742 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 128415742
NCBI-ProteinID: XP_053248359
LinkDB
Position
6:43071033..43086020
AA seq 690 aa
MYECARIKHMCTNARIELMRVCATSLHASEILGWRAAASLAWSVLLLPLCIAAFISISSI
DFFHPVQWITSSFNDLYTSYVIFCILLMSVVILVISIFNVEFHAVVPSIPCSRLALISKI
IHPQQVIHSIAHAVMGMLVAWCAAVMTKGKFLFLSVPCTATESVADADLRVCLNEYHLFL
LLLGAFMGYSYSLRYLVNNLNYLPFPVIQQYKYLRFRRSLPLLAKHSCVESLYMVRNFCA
AYYFFGYIPRAWIITTMNLQTDSKLHPLDTMAGLLDFSLLYHSWLCGVFLLMTWYIAWLL
FRIYATEAHHFPVQPTFAEETDQCLPKILSSNPPPLIKFLALQDLMFLSQYSSVRRQEVF
SLSQPGGHPHNWTSISQECLKLLSDLTQKLIMHQEAAAANGRLKQQSVGDMRQPSSPPGA
AAEETSFHTPRSIMLPRTQMPSLVKSSLLPLKTSPSSDVRSNLGSPFTPLSRKAGVLDLN
SPWNGSVQSPHIMRRGPKLWTTSSDLQWTASSPEPYPMSAVAGGANVAVQPSFIYTWLQS
KKEQIKTFLSKRVLIMYFFSKNPEASIQALFSDTQMHIWALEGLSHLIAASFTEDRYGVV
QTTLPSILNTLLTLQEVVDKQFKLPHVSSKPPRISGSLADTSYKTLRFALRASLKTAIYR
IITTFGEHLNAVQVSAEVKKRLQQFLEFKE
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgtatgaatgcgcgcgcattaagcacatgtgcacgaacgcccgaatagagctaatgcgt
gtttgcgcaacatcacttcatgcttcagagatcttgggatggagagcagctgcaagcctt
gcttggtcggtgctgctgcttcctctgtgtattgcagccttcatcagcattagcagcatt
gacttcttccacccggtacaatggatcacaagctcattcaatgacctgtatacctcctac
gttattttctgcatactgctaatgtctgtggtcatactggtaataagcatcttcaacgtt
gagtttcatgcagttgtgccttctattccttgctctcggttagctctgataagcaagatt
atccacccgcagcaagtgatccattccattgctcatgctgtaatgggaatgctggtagct
tggtgtgcagcagttatgacaaaggggaagtttctctttttatctgtaccctgcacagct
acagaaagtgtagctgatgctgatctgcgcgtgtgcctgaatgagtaccacctcttcctc
ttgcttcttggagcctttatgggttacagctatagccttcggtatctggttaacaatttg
aactaccttccatttcctgttatacagcaatacaagtacctgcggttcaggagatcactt
ccgttgcttgcaaagcatagttgtgtggagtcgctttatatggtcagaaacttttgtgct
gcttactatttctttggttatattccaagggcatggataattaccacaatgaaccttcag
accgatagtaaacttcatcctctggacacgatggctggtctcttggatttctcccttctg
taccacagctggctatgtggcgtgtttcttctgatgacttggtacattgcatggctgctc
ttcagaatctatgccactgaggcacatcactttcctgtccagccgacttttgcggaagaa
actgaccagtgtttacctaaaattttaagcagcaaccccccacctcttataaagttcttg
gctttacaggacttgatgttcctttcccagtattcttctgtgcgacgtcaagaggtcttc
agccttagccagccaggtggacaccctcacaactggacttcaatctcccaggagtgcttg
aaacttttaagtgatctgacacagaaactgataatgcaccaggaggctgcagctgcaaat
gggaggctgaaacagcaatctgtgggggacatgagacagccctctagccctccaggagca
gctgctgaagaaacatcatttcacactccaaggtccattatgcttcctcgaacccaaatg
ccttctctggtcaaatcatctctgttgcctttgaaaacatccccttcttctgacgtcaga
agcaatttagggtcacctttcacacctctgagtcgcaaggctggcgtgctggatttaaac
tctccttggaatggatctgtccaaagtccccatattatgaggagaggaccaaaattatgg
acaacaagttcagatctgcagtggacagcctcttctcctgaaccctacccaatgagtgct
gttgcaggcggtgcaaatgtagcagtacaaccaagttttatctatacgtggctgcagagc
aagaaagagcagatcaaaaccttcttatcaaaacgagtactgataatgtattttttcagc
aagaaccctgaggcttccattcaggctctcttttctgatacccaaatgcatatttgggct
ttggaaggtttgtcgcatctcatagcagcttcatttaccgaagacagatatggagttgtc
caaacaacactgccttctattctgaatacgttgctaactcttcaagaggtggtagacaag
cagttcaagcttcctcatgtttccagcaaacccccccggatttcaggaagtctggcagac
acttcctacaaaacccttcgatttgccttaagagcgtcgctgaaaactgcaatctatcgg
atcatcaccacttttggagagcacttaaatgccgtgcaagtatctgcagaagtcaagaaa
agactccagcagttcctggagttcaaggaatag

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