Podarcis raffonei (Aeolian wall lizard): 128415767
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Entry
128415767 CDS
T09310
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128415767 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128415767 (PRPF38A)
Spliceosome [BR:
praf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128415767 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
128415767 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128415767
NCBI-ProteinID:
XP_053248417
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All DBs
Position
6:complement(43939718..43945003)
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AA seq
313 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYTGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDQLLHDERVCDVILPRLQKRYVLEEAEQLEPR
ISALEEDMDDVESSEEEEEEDEKMERVPSPDHRRRGYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPAGHHRSHRHRSHSKSPER
SKKSHKKSRRGNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccggacagtgaaggacgcgcacagcatccacggcactaaccctcaatacctg
gtggagaaaatcatccgcactcgcatctatgaatccaagtattggaaggaggagtgcttc
ggcctcacagctgaactggtggtggataaagccatggaactgagatacactggtggagtt
tatggaggaaatatcaagcctacaccattcttgtgcttgactttgaagatgctgcagata
cagcctgaaaaggatatcattgttgaatttataaagaacgaagatttcaagtatgtaaga
ttgctgggtgcattgtacatgagactgactggcactgctatagattgctacaaataccta
gaacctttgtacaatgattatcgaaaaataaaaagccaaaatagaaatggggagtttgaa
ctaatgcacgtggatgagtttattgatcaactgctccatgatgagcgagtttgtgatgtc
attttacctagactacagaaacgatatgtcctagaagaggctgaacaactggaaccacga
attagcgctttggaagaagatatggatgatgtggagtccagtgaggaggaggaagaggag
gatgaaaagatggagcgagttccctcacctgatcacaggagaagaggctacagggatcta
gacaaaccccgcagatctccaactctgcgttacagaagaagccgaagcagatctcctaga
aggagaagccgatccccgaagaggagaagtccatcaccacgtcgggaaaggcatcgcagc
aagagcccaaggcgacaccgaagtagatctagggaaagacgccacagatcaagatctaaa
tctccagcagggcatcatcgtagccatagacatcgaagtcattccaagtccccagaaaga
tctaaaaagagccataagaagagtcgtcggggaaatgaatga
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