Podarcis raffonei (Aeolian wall lizard): 128416042
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Entry
128416042 CDS
T09310
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03022
Basal transcription factors
praf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128416042 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
128416042 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128416042 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128416042 (GTF2H1)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128416042 (GTF2H1)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128416042 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
128416042
NCBI-ProteinID:
XP_053249073
LinkDB
All DBs
Position
1:72451168..72476755
Genome browser
AA seq
555 aa
AA seq
DB search
MQSSVAIMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQ
KISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEE
KNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSMNAVDSSTASNKQDVGISAAFLADV
RPQTDGCNGLRYNLTSDIIESIFRTYPAVKLKYAENVPHNMTEKEFWTRFFQSHYFHRDR
LNAGSKDLFAECAKMDEKGLKTMVSQGVKNPFLDLTALEDKTLDEGYGVSLAASTSNATK
SIKESSNAAIIKRFNHHSAMVLAAGLRKQDTQNDHYNEASSMDGNSRDSDFFQPPVKKVK
LQESIEYEDLENNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSLYSIREEMDT
YVPKLTQVISSGAASSTIAALSPGGALMQGGTQQAINQMVPNDVQAELKHLYVALGELLR
HFWSCFPVNTPFLEEKVVKMRSNLERFQVTKLCPFQDKIRRQYLSINLINHIEEMLQTAY
NKFHTWQSRRMLKKT
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctctgtagccattatggcaacatcatctgaagaagtgttactaatagtaaag
aaggtgcgtcaaaagaagcaggacggagctctttacctcatggctgaaagaatagcctgg
gcacctgagggcaaagaccgattcacaatcagccatatgtacgcagatataaaatgccag
aaaatcagtcctgaaggaaaagctaagattcagcttcagttggtactacatgcaggggac
acaaccaacttccatttctctaatgagagcacagcagtgaaagagagagatgcagtaaag
gatctccttcagcagttactgcccaagttcaagaggaaagctaataaagaacttgaggaa
aaaaacagaatgctacaagaagatcctgttttgtttcaactttataaagaccttgttgtg
agtcaggtgatcagtgctgaggagttctgggccaaccgtttaagcatgaatgctgtggac
agttctactgcatctaataagcaggatgtgggcatttctgcagcttttctggctgatgtt
cgacctcagacagatggatgcaatggtctcagatataatttgacttcagatatcattgaa
tctatatttagaacttaccctgcagtaaaactgaaatacgcagaaaatgttcctcacaat
atgacagagaaagaattctggacacgattcttccagtctcactatttccacagggatagg
ctgaatgcaggatcaaaagacctttttgcagaatgtgccaaaatggatgaaaagggatta
aaaacaatggtgtctcaaggtgtgaaaaatcctttcttagatttaacagccttggaagat
aaaacgttggatgaaggttatggtgtttccttggcggcttccacatccaacgctacaaaa
tcaataaaagagagtagcaatgctgccattataaaacggtttaaccatcacagtgccatg
gtccttgcagctgggcttagaaaacaagacacacagaatgaccactacaatgaggccagc
agtatggatggaaattccagagattcagatttctttcagccaccagtaaaaaaggtaaag
ctgcaagagtccattgaatatgaagatttagaaaacaacaacagcgttaaaactattgca
ctaaacctaaagaaatcagataggtattatcatggtccaacaccaattcaatcacagcaa
tatgcaactagccaagatattattaattctttgtatagtattagagaagaaatggacact
tatgtacccaaactaactcaggttatctcaagtggtgctgcaagtagtacaatcgcagct
ctgtcacctggaggagcacttatgcagggtggaacacagcaagccataaatcagatggtg
ccaaatgatgttcaggctgagctgaaacacttgtatgtggcactaggagagctgttacga
catttttggtcctgctttccggttaacacaccattcctagaagagaaggttgtgaaaatg
aggagtaatctggaaagatttcaagtcactaaactgtgtccattccaagacaaaattcga
agacagtatttaagcataaatctgataaatcacatagaagaaatgctgcaaacagcctac
aataaattccacacatggcagtctcggcgtatgttgaagaaaacgtga
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