Podarcis raffonei (Aeolian wall lizard): 128416296
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Entry
128416296 CDS
T09310
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128416296 (SOGA1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128416296 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
128416296
NCBI-ProteinID:
XP_053249854
LinkDB
All DBs
Position
6:69504656..69587889
Genome browser
AA seq
1747 aa
AA seq
DB search
MAAPAEAESSQPLASAPAPPPPPPEKKKLQRAPSPARPKDVPGWSLAKSRRGSHPGSPAS
FSSGKPGAGGGHSRRAGGAKDGRGDKKGKATPPAGARGVGKGSAGRAGARMKGRNRLAAA
GGEGAATSGGSAKGSSRPQLPLALTDSSSEVSDCSASEEAKLLSLLELGGLSGGGSDTES
PPSSSAPAQPASASADGASPLPEDPSTAASLASSRLPLSTSLAFSDLTEELLDAGVAREL
EELRSENDYLKDEIEELRAEMLEMRDVYMEEDIYQLQELRQQLDQASKTCRILQYRLRKA
ERRSLRVAQTGQVDGELIHGLEQDVKVAKDVSVRLHNELETVEKKRIKLEDENEDLRQRL
IESELAKQVLQNEMDKLRENSLKKRGSRSLGKTDKKSSVQEDSADLKCQLHFAKEESALM
CKKLTKLAKENDSMKEELTKYRSLYGDLESSLSIEELADSPHSREAELKVHLKLVEEEAN
ILSRRIVELEVENRGLRAEMEDMRGQGDKELLGQDIRFAFSMTNCGDSGDSVVELRRHLQ
FVEEEAELLRRSLMELEEQNKLLMNELNKYKSDHDLDITLSEDSCSVISETSQEELATAK
VQISELSGKVKKLQYENRVLLSNLQRCDLASCQTTRPMLETDAEAGDSAQCIPTSLWREV
PIGGENDAKERAPGNGFSKSHESSPCRLLKSKDFETLLDIRDQAALVSKAIDVLISDANG
FTSSLKLCMDNDCAELVLSEAMDNESMTDSKLISAILMRLGVLQQELNTFMRKVDYIGDH
LKDQKDSLPSASSQDSTKEALQKAHGSEFQQSDFREPPDWDITESRTSDLYRSSSSNSTA
TMDVDPNMELDRSYKSYQPEEKDSYVSEIKELQLVLSEANESLRGLQEQLSQERQLRKEE
AENFTQKICQLKEDHQKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQFKQNFLL
LFMKLKWFLKHWRQGKILQNEGNDFLEVNSMKELYLLIEEEELNPQQQADNKMCIRDTWS
QDSQANEYIKTLSDMKVTLKELCTELREERRGMNELQQQFAKAKATWEMERTELKCLIAQ
LESKPGKGLTERALSDWKTALKREREEHQHLLAESYSAVMDLTKQLQISEKNWDQEKLEL
LDRFKDERQQAEQQVKELQNKINQLQKGADLWALKNSEMEKHGSSWKETLNEKITDKETV
SETDMKGSNLKRTKSVSSMSEFESLLDCSPYLPGKTSPVITDNVCSKKGSPATQVLPDTL
KDPAGFAPNNCAYLNSEQPTPESLTTEKLDVSSCNFTQTSSFSVQDQAQKHVQRSYTAPD
KTGIRIYYSPPVVRRLESPLVHKRDGKIMVEPGFLFTMAKPKEESDSSENMYSRWLCNFS
KQHRELLDSSTVSEKAVAPVPRFPPSLHDLEISGNMSDDMKEITNCVRQAIRSSSLERKV
KSTSSQTVGLASVGTQTTQSVSIGLQTDMPRGSIHSSKSWSPRSSSLISVRSKQISTSLD
KVHSRIERPCCSPKYGSPKLQRRSSSKLENSKDRSLWNLHQTKQNGSAWARSTTTRDSPV
LSNINDGLSSLFNVVEHSGSTESIWKPGCQESKAKPETPKYGIVQEFFRNVCGRTQSPTL
APEKKDPVGGDSSSSSSKKPEHSSSVVLQQSENAPKVLDKKPLKQSCSEEPKLSIPGQGG
KDRALKEPDIISAIIANEDVACDCSSQSLTSCFARPSRSAVRHSPSRCKLHPSDGSRVEE
KAGPLSE
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccggctgaggcggagtccagccagcccctcgcctcggctccggcgccgcca
ccgccgcctcccgagaagaagaagctccagcgagcgccgtccccggccagacccaaggat
gtccccggctggtcgctggccaagagccgtcgcggcagccacccgggctcgcccgcctcg
ttctcctccgggaagccgggcgcggggggcgggcactcgcgccgggctgggggcgccaag
gatggccgcggcgacaagaagggcaaggccacgccgccggcgggggccaggggcgtcggg
aagggctcggcaggccgcgccggggcccgaatgaaggggcggaaccgcctggccgcggcg
gggggcgagggggccgcgacctccggcggctccgccaaagggtcgtcgcgccctcagctg
ccgctcgccctcacggacagcagttcggaggtgtcggactgcagcgcctcggaggaggcc
aagctgctgtcgctgctggagctgggcgggctgagcggcggcggcagcgacaccgagtcg
cccccgagcagcagcgccccggcccagcccgccagcgcctccgccgacggcgcgtccccg
ctgcccgaggacccgtcgacggccgcctcgctggccagcagccgcctgcctctcagcacc
tcgctggccttctccgacctcaccgaggagctgctggacgcgggcgtcgcccgggagctg
gaggaactgcgctccgagaacgactatctcaaggatgagattgaggaattgcgggctgag
atgctggagatgagagatgtctacatggaagaagatatctaccagctacaggagctccgg
cagcagctggaccaagccagtaagacctgccgcatcttgcaataccgtctgcgaaaggca
gagcggcgcagccttcgtgtggcacagactggccaggtggatggagagctcatccacggc
cttgaacaagacgtcaaggtagccaaagatgtctctgtgaggctccataatgaactggag
acagtggagaaaaaacggatcaagctggaggatgagaatgaggacttgcgccaacggctc
attgagagtgagttggctaagcaggtgctgcagaatgagatggataagctacgggagaat
tctctgaagaaaagaggatcacgttctcttgggaagacagacaagaagtcatctgtccag
gaggacagcgcagacctcaagtgtcaattgcattttgctaaggaggaatctgctctgatg
tgcaagaaactgaccaagttagccaaagagaacgacagtatgaaggaggagctgacgaaa
tacagatccttgtatggggacctggagagctccctctccatagaggaactggctgactcc
cctcattccagagaggcagaactaaaagtccacctgaagcttgtagaggaagaagccaac
atcttgagccggaggatagtagagcttgaggttgagaaccgagggctgagggcagagatg
gaagacatgaggggccaaggagacaaagaactcttagggcaagacatccggtttgccttc
tccatgacaaactgcggggactctggggacagtgtggtggagcttaggcggcacttgcag
tttgtggaggaggaggcagaactgctgaggcgctcgctgatggagttggaggagcagaac
aagctcctcatgaatgagctcaataagtacaagtcagaccatgacctggacatcactctg
tctgaggacagctgctcagtgattagtgagacctcccaagaagaactggccacggccaag
gtccaaatcagtgagctaagtggcaaggttaagaagctccagtatgagaaccgtgtcctg
ctctccaacttgcagcgctgtgaccttgcttcctgccagaccactcggcccatgctggag
acggatgctgaggctggtgactctgcccagtgcatcccaacgtcgctttggagagaggtg
cccattgggggagagaatgatgccaaggagagagcacctggcaacggctttagcaagtcg
catgaaagcagcccctgcaggcttctcaagtccaaggactttgagaccctccttgacatc
agggaccaggctgcgcttgtcagcaaagccattgatgtcctgatctcagatgccaatggc
ttcacctccagtctcaagctctgcatggacaacgactgtgcagagctggtgctgagcgaa
gccatggataatgagagtatgactgactctaagctgatcagtgccattttgatgaggctt
ggggtccttcagcaggagctgaacaccttcatgaggaaggtggactacattggagaccac
ctgaaagaccagaaggactccttgccaagcgccagctcccaggattccacaaaagaggct
ctgcagaaagctcatggctctgaattccagcagtctgactttagggagccccccgactgg
gacatcacggagagcaggacctctgatctctaccgcagtagcagcagcaacagtaccgcc
accatggatgtggatcccaacatggaacttgacaggagctacaagtcatatcaaccagag
gagaaggactcctatgtgtctgagatcaaagaattgcaactggtcctttcagaggctaat
gagagcttgaggggcctacaagaacagctctcccaggagaggcaactgaggaaagaggaa
gcagagaacttcacccagaaaatctgccagttgaaggaagatcaccagaaggccctcttg
aggcgagaatttgagctgcagagcctgaacctacagaggagactggagcaaaagttctgg
agccaggagaagaaccttctggtgcaggaatcccagcagttcaagcaaaatttcttgctc
cttttcatgaagctcaagtggtttctgaagcattggaggcagggaaagatcctacaaaat
gagggcaatgacttcttggaggtgaacagcatgaaagaactgtacctgctaattgaagag
gaggagctgaacccccagcagcaagcagataacaagatgtgtatcagagatacctggtct
caggactcgcaggccaatgagtatatcaagaccctatcagacatgaaggtgaccttgaag
gagctgtgcacagagttgcgcgaagagagaagaggcatgaatgaactgcagcaacagttt
gccaaggctaaagcgacctgggaaatggagagaactgagctcaagtgtctcatcgcacag
ctggaatccaagcctgggaaaggcttgacagagcgagcgctctctgactggaagacagct
ctgaagagggagagggaggagcaccagcacctcctggctgagtcgtacagtgccgtcatg
gacctgaccaagcagctgcagatcagcgagaagaactgggaccaggagaaactggagctc
ctggaccgattcaaggatgaacggcagcaggcagagcagcaagtgaaggagctgcagaac
aaaataaatcagctgcagaagggagctgacctctgggctttgaaaaactctgaaatggag
aagcatggcagtagctggaaagagactctcaatgagaaaatcaccgacaaagaaactgtt
tccgaaacagacatgaaaggaagcaatttaaaaaggaccaagtcagtctcctcaatgtct
gaatttgaaagtttgcttgattgttctccttatcttcctggcaaaaccagtcccgtcatc
acagacaacgtctgcagcaaaaagggctctccagctacacaggtgttgcctgacactttg
aaggaccctgcagggtttgcccccaataactgtgcctatctgaatagtgagcagcccacg
ccagagagcctgaccacagagaagctggatgtctcgtcatgcaacttcacccagacaagc
agcttctctgtgcaggatcaggcccagaaacatgtgcagagaagctacactgctcccgac
aagactgggatccgcatatattatagcccaccggtggtacgcaggttggaatcgccccta
gtacacaagagagacgggaagataatggttgagcctggcttcctgttcaccatggccaag
cccaaggaagaatcggacagctccgaaaacatgtacagccggtggctgtgcaacttctcc
aagcagcaccgagagctgcttgacagcagtactgttagcgagaaagctgtggcccctgtg
cccagatttccgccttccctgcatgaccttgagatctccggcaacatgagcgatgacatg
aaggagatcaccaactgtgtccggcaagctatccgctccagctccctggagagaaaggtt
aagagcacttccagccagacagtgggattggccagtgttggtacccagactacccagtct
gtcagcatcggtctgcagacagacatgcccaggggcagcatacacagcagcaagagctgg
tccccacgaagctcctcccttatatccgttcgcagcaagcagatctcgacctctctggac
aaagtccactccaggatcgaacggccctgttgctcccccaagtacggctctccgaaactc
caaagaagatcatcttctaagctggagaactccaaggaccgaagcctgtggaacctccat
cagacgaaacagaatggctcagcctgggctcgttccaccaccaccagagacagcccagtt
ctcagcaacattaacgacggcctgtccagcttgttcaatgttgtagagcattctgggagc
acagagtccatctggaagccaggatgccaggaaagcaaagccaagccagaaactcctaag
tacgggatagtgcaggagtttttccggaatgtgtgtggcagaactcagagccccactttg
gctccagagaaaaaagacccggtaggaggagacagcagcagcagcagcagcaagaagcca
gagcattcctcctcagttgtgctccagcagtctgaaaacgcccccaaggtccttgacaaa
aagcccttgaagcagagctgcagtgaggaaccaaagctgtccatcccaggccaaggtggc
aaggacagagccttaaaggagccagacatcatctctgctattattgccaatgaggacgtg
gcctgtgattgcagctcccagtcgctgacttcctgttttgctcggccgtcgcgctcagct
gtccgccactccccttccaggtgcaagctgcacccttctgatggcagccgggtagaagag
aaagcagggcctctgagtgagtga
DBGET
integrated database retrieval system