Podarcis raffonei (Aeolian wall lizard): 128416336
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Entry
128416336 CDS
T09310
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04217
Necroptosis
praf04622
RIG-I-like receptor signaling pathway
praf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128416336
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128416336
04625 C-type lectin receptor signaling pathway
128416336
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128416336
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128416336
Enzymes [BR:
praf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128416336
Peptidases and inhibitors [BR:
praf01002
]
Cysteine peptidases
Family C67
128416336
Ubiquitin system [BR:
praf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128416336
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
128416336
NCBI-ProteinID:
XP_053249940
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All DBs
Position
6:71953099..71965300
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AA seq
561 aa
AA seq
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MDFAPEKKEAFIVTREICAGRKKIPLGSIGCFVEGKHSKGRIVDMKSRPVIALMSSHIRP
LSRHQAALLLTIESPQKRHSLFCNEQLFSSICCLRIHDVLQLRYGRVATVGIVRGFWERR
RKPGSGELRMVLIEVELLDPGIIALGNSSSRLKIDASKIVAVSSSITNPVWCKEIGQRSL
KKAGSYIMEHLAEDDAETAWEHDVLQKMEGIMKGIQGHCNSCYLDTTLYSLFSFSSALDG
ILYSSDVRDATVQQILRQQIVQPLRQHGYVGAENVMNLRRSLRCDSFVTEEKDPEEFLNV
LLREVLAVEPLLKIRSDNEVLEYNCYQILAEKDATIKVPTVQQLLERSLLSYGLKLDEIP
SCLILQMPRFGKSYKKFSSVYPSLELDLTDMVEQAPRVCCVCGGEAAHGCSRCQLDSLLH
PKLIKLFENLSKPPSHRIGPKHPYKGLGPNSPPTKQCTLDLFAVLCIESSHYVAFVKYGP
LRHSWLFFDSMAGTLENEKGTNIPVVKACPQIGDYLAMTPEEFATVDTKQMDAFSRRFFC
DAYTFMYQKPQHASYKYWFRN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggattttgctccagagaagaaagaggccttcatcgtaactcgagagatctgtgctggc
aggaagaagatccccttggggtctataggatgctttgtggagggcaagcacagcaaaggt
cgtatagttgacatgaagtccaggcctgtcatagccctgatgagcagccacataagacct
ctcagccgacaccaggctgccctgttgctcaccattgagagcccacaaaagaggcatagc
ctgttctgcaatgaacagctcttctcttcaatttgctgcctgaggatccacgatgtgctg
caactaagatacggcagagtggcgactgttggtattgtgaggggcttctgggaacggcgc
aggaaaccgggcagtggagagctgaggatggtcctcattgaggtggagttgctggatcca
ggaattattgcccttggtaacagctcctccaggctgaaaatcgatgcaagcaagattgtc
gctgttagctccagcattaccaatcccgtttggtgcaaagagattggccagagatccctt
aagaaagcgggcagttacataatggagcacttggcagaggatgatgctgagacagcatgg
gaacatgacgtcctgcagaagatggaaggcatcatgaagggcatccaggggcattgcaac
tcctgctacctagacactaccctctacagtttattcagcttctcctctgccttggatggc
atcctctattcatctgacgtgcgcgatgcaacagtgcagcaaatcttgaggcagcagatt
gtgcagcctttgagacagcatggctatgtgggagctgagaatgtgatgaacttgaggagg
tcgctgcgatgtgacagctttgttacagaagagaaagatccagaggagtttctgaatgtc
cttctcagagaggtcttggctgtagaacccttgctcaaaatcaggtcagacaacgaagtg
ctagaatataattgctaccagatccttgcagagaaagatgctacaatcaaagtgcccact
gtgcagcagctactggaaagatccctgctctcatatggcttaaagctggatgagattcct
tcatgcctcatcttacagatgcctaggtttgggaagagctataagaagttttcatcagtg
tatccctctctcgagcttgacctcacagatatggtggagcaagctccacgggtgtgttgt
gtttgtggaggagaggcagcccacggatgctcacggtgccaactggattccctcctgcat
cccaaactcattaaactgtttgagaacctttctaagccaccatctcatcgaattggaccg
aagcatccttacaaaggactaggacccaacagccctcccacgaagcagtgcaccttggat
ctctttgccgtcctttgcatagaaagcagccattatgtggcttttgttaaatacggcccc
ttgagacactcctggcttttcttcgacagcatggctggcacactggaaaatgagaaagga
actaacattcctgtggtcaaggcctgccctcagattggagactatctggctatgacaccc
gaggaatttgctactgtggacaccaagcagatggatgctttttccagaagatttttctgc
gatgcttacacatttatgtaccaaaagccacagcacgcttcttacaagtattggttcaga
aactga
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