Podarcis raffonei (Aeolian wall lizard): 128416386
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Entry
128416386 CDS
T09310
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04512
ECM-receptor interaction
praf04514
Cell adhesion molecule (CAM) interaction
praf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128416386 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
128416386 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128416386 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
praf00535
]
128416386 (SDC4)
Proteoglycans [BR:
praf00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
128416386 (SDC4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
128416386
NCBI-ProteinID:
XP_053250070
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All DBs
Position
6:76935115..76960570
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AA seq
202 aa
AA seq
DB search
MKPSRPAGLCAPALLLLLLLGAAAAESVRETETMDPQLYEFPSGDLPDDEDSRPDFVIDE
DGYDYSGSGDEEDDSEDALLPASERPMEPMDNFIPYSKGETKDSEPAVVEIENDSVLRKP
APSEEGDEPSNKISMASTANGSIFERTEVLAALIAGGAVGLLLFAVFPILLLIYRMKKKD
EGSYDLGKKPIYKKAPTNEFYA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccagtcgccccgccggcttgtgcgcccccgctctcctgctgctcttgctgctg
ggcgccgccgccgccgagtcggtgagagaaaccgagactatggacccacagctatatgaa
tttccatctggagatttgccagatgatgaggactcaaggcctgactttgtaattgatgaa
gatggctatgactactcaggttcaggagatgaagaagatgattcagaggatgccttactt
ccagcctctgaaagacctatggagcccatggacaactttatcccttattccaaaggagag
acaaaggatagcgagcctgctgtggtagaaatagaaaacgattctgttctcaggaaacct
gcgccctctgaagaaggcgatgagccatccaacaagatctcgatggccagcacagccaat
ggcagcatctttgagaggacagaagttctggcagctcttattgcaggtggggcagtcggg
ttgctgctgtttgctgtcttcccaatcctcctcctgatctatcgcatgaagaaaaaggac
gagggcagttacgacctgggcaagaagccgatctacaagaaagcacccacaaatgaattc
tacgcctaa
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