Podarcis raffonei (Aeolian wall lizard): 128416494
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Entry
128416494 CDS
T09310
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1 isoform X1
KO
K14298
mRNA export factor
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128416494 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128416494 (RAE1)
03036 Chromosome and associated proteins [BR:
praf03036
]
128416494 (RAE1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128416494 (RAE1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128416494 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Exonuc_X-T_C
Beta-prop_SPT8
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
128416494
NCBI-ProteinID:
XP_053250306
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All DBs
Position
6:85214687..85233669
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACSFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttgggtcaacatcagggtttggaactggaggtaccagcatgtttggcagc
acagctacagataatcacaaccctatgaaggatattgaagttacttcaccacctgatgac
agcataggctgtttagctttcagcccaccaacattgccggggaatttccttattgcagga
tcatgggcaaatgatgttcgttgttgggaagtccaggataacgggcagacaattccaaaa
gcacagcaaatgcacacaggacctgtgctagacgtttgctggagtgacgatgggagtaaa
gtgtttacagcatcttgtgataaaactgccaaaatgtgggatctcaacagcaaccaggca
atacaaattgcacagcatgaagctcctgtaaagactgtccattggattaaagcaccaaat
tatagctgtgtgatgactggaagctgggataaaactctgaagttctgggacacccgatcg
cccacgccaatgatgaccctgcagttgcctgagcggtgctactgtgctgatgtagtatac
cccatggctgttgtagctactgcagagagaggcttaatagtttatcagttagagaatcag
ccttctgaatttagaagaatagactctccacttaagcatcagcatcgctgtgttgctatc
tttaaagacaaagtgaacaagccaacagggtttgcccttggaagcatcgaaggaagagta
gccattcattacattaacccaccaaatcctgccaaagacaacttcaccttcaaatgtcat
cgttccaatggcacaaacacatctgcacctcaggatatctatgctgttaatgggatcgcc
tttcaccctgcccacggcacccttgcaacggtaggatctgatggcagattcagcttttgg
gataaagatgcacggacgaagctaaaaacctcagaacagctggaccagccaatatctgct
tgctccttcaaccacaatggcaatatatttgcatatgcgtctagttacgattggtcaaag
gggcatgaattctataatccgcaaaagaagaactatatatttctgcgcaatgctgccgaa
gagttaaaacccagaaataagaagtattaa
DBGET
integrated database retrieval system
