Podarcis raffonei (Aeolian wall lizard): 128416742
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Entry
128416742 CDS
T09310
Symbol
ZNFX1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128416742 (ZNFX1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
UvrD-helicase
DEAD
SLFN-g3_helicase
PhoH
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128416742
NCBI-ProteinID:
XP_053250798
LinkDB
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Position
6:99893697..99906476
Genome browser
AA seq
1909 aa
AA seq
DB search
MDGRGRGRGQPRRPRRGGGAGGRGREPQGGGAFQQNASGPREGGPGRAAERRAGSGRTPH
QDGARNPSRLAEGAPRWLGAEGNRFPRRGGVWPGADPREERRAGGQNQGGPARDGPGRQR
EGPPNADPTQRPHAGPGGSPQQRGPMISTRFLRELLEKDPSEVAITLASSPRLREALSPV
AMRPDLVQLLCQVLCKACLSRMDRQSIQRLLETVKESSFLRVCLPQYVADMLTEARPEVR
HQCPQHIASVVALVQELVSIFPASSLQKVALLMSVLPGSVNGLRALGVDFPVELDQSLEK
LQGFIQHLQERRREGTLRVDSCTLLQPTAPGEEGEYRAMSIYPTYEEVNRGQKPFLRPNL
ISQPYESPAVYLDTHFRLLREDFVRPLREGILQFLQSFEEAGPGRRRFDDIRVYLDARIL
APLCSRTGIDYKVHFDSTPLGAVRWENSKRLLYGSLVCLSKDNFETFLFATVSDREPQEL
RKGFVHLSFATHSQALLAEVQPSDSFIMVETTAYFEAYRHVLQGLQELREEDVPFQRYIV
HCEAQVREPAYLRREPGSSLYDLRCLMAKPPPAGAEGAPEGRVNVLDASQWPTQEAVGLD
ESQLQALKLALTKELAIIQGPPGTGKTYVGLKIMEVLLKNKAARGETPILVVCYTNHALD
QFLEGIQAFQPTGIVRVGGRSNSEKLKPFTLQQLRGRSDFLRGLPGHLRWSYSDITCEMR
EAESELSRGAAQLECGLHGILHEKHLRSCISSRHWESLVRGLEEDWMDPKHSLILEWLGL
GATPVENMADPGWPENAGVEEDQEAGEGPQTEPELLQVVEEADLIQRERLLDHDEDGRLR
RRRPPRHNLDDLFLAMRLDDEEKGEQRAPHGAENAGFQLQPGRKKKMKRQAKAELKKWQA
MTKEEAEAVLDVWQLNLSSRWKLYRYWLQKHQAEIQREMLQHKQKYQAAADRLAELRQHQ
DLCVFRTAQIVGMTTTGAARYRQVLQQVAPRVVIVEEAAEVLEAHVITTLSRACQHLILI
GDHQQLRPSANVYDLARNFHLEVSLFERLVKVGLPFVRLAFQHRMRPEIAQLLTPHIYQD
LENHPSVLRYENIKGVSSNLFFVEHSFLEQEIQEGRSHQNQHEAQFVVELCRYLLRQGYQ
PSQISILTTYTGQLFCLRRLLPAKEFQGVKVHVVDKYQGEENDIILLSLVRSNLAGRVGF
LQIPNRICVALSRAKKGLYCVGNMGMLSQVPLWSRILHTLREKGHVGRALRLACQNHPQT
KTDVVQAEDFRQVPEGGCSIPCDTRLGCGHVCPRACHPYDPQHKELRCLKPCQKVLCDNG
HRCPWLCCEPCGKCQVKVPKTVPRCGHQQQVPCSMAAKDFCCKEPCGKTLECGHACRLTC
GQQCERRCPELVLATLPCGHSQEVPCSAASEMAYGRPIRCNTKCDSILECGHPCPGSCHT
CFGGRFHQPCRSPCKRPLVCGHQCRQPCTRDCPPCRQPCQNRCIHSRCPKQCGAPCSPCM
EPCEWRCQHHQCGRLCSEPCDRPRCDVPCPKRLPCGHPCAGLCGEPCPQKCLTCDAEELT
QIFFGCEDEPDARFVQLEDCGHIFSALGLDRYMDGDEEEEEGAVRLKVCPSCQTPVRKSL
RYGTLVKRSLAEVEVVKGRMQGSSAEIASGALQLVRALQQETTLRRHLTRQHKQLRERLE
DDSLSASTLGLVETLFGFYAQVAGLMANVGKLAQQEQEGVRRRLAEVAGWLDQPRDSFSG
QQVSELRTELRRMTYLVELLARCSTAGEKASRAPGTVELVSAARKVLEGPGRFSPEAESE
AKAKLKELEAALPTVAGLGISEEERKQIVAAVSGATRGHWFKCRNGHFYVIGECGGAMET
TRCPECRETIGGERHTLESSNRLAPEMDGATHAAWSEETNRLNLNNYLH
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcgcgggcgaggaagggggcagccgcggcggccgcgaagaggcggaggagcg
ggaggcagaggcagagagcctcaaggtggaggagccttccagcagaacgcaagtgggccg
cgtgaggggggccctggcagagctgcagagaggagggctggctctggccggaccccccac
caggacggggcgcgcaaccccagcaggctggctgagggggcacccaggtggctgggggca
gaggggaaccgtttccctcgcagagggggcgtctggcccggggctgatccgagggaggag
cggagggctgggggacagaaccagggagggccggccagggatggcccaggaaggcaaaga
gaggggcccccaaacgctgaccccacccagcggccccacgcagggccaggaggctctccg
cagcagcgaggcccgatgatcagcacccgcttcctccgtgaactcctcgagaaggaccct
tcggaggtggccatcacgctggcttccagcccccgcctgcgggaggcgctctccccagtt
gccatgaggccagacttggtacagctgctgtgccaggttctctgcaaggcctgcctctcc
cgcatggaccgccagagcattcagcggctgctggagacggtaaaggagtcctccttcctc
cgggtctgcctgccccagtacgtggccgacatgctgacggaggcccggccggaggtgcgg
caccagtgcccccagcacattgccagtgtagtggcgctggtccaggagctggtcagcatc
ttcccggccagctccctccagaaggtggccctgctgatgtccgtcctgccaggctccgtc
aacggcctccgggccctgggggtggacttcccggtggagctggaccagagtctggagaag
ctgcagggcttcatccagcacctccaggagcggcggcgcgagggcaccttgcgggtggac
agctgcaccctcctccagcccaccgcccccggcgaggaaggggagtaccgcgccatgtcc
atctaccccacctacgaggaggtgaaccgcggccagaagcccttcctgcgccccaacctc
atcagccagccctacgagagccccgccgtttacctggacacccactttcgcctcctgagg
gaggactttgtccggccgctgagggagggcatcctccagttcctccagagcttcgaggag
gccggcccgggcaggaggaggtttgacgacatccgcgtgtacctggacgcccggatcctg
gctccactctgctcccggaccggcattgactacaaggtgcactttgattccacgccgctg
ggcgccgtccggtgggaaaactccaagcgcctgctgtacggctccctggtctgcctgtcc
aaggacaactttgagacctttctctttgccacggtctccgaccgggagccccaggagctg
cgcaagggctttgtccacctctccttcgccacccacagccaggccctgctggccgaggtc
cagccctccgactccttcatcatggtggagaccaccgcctactttgaggcctaccgacac
gtcctgcaggggctgcaggagctgcgggaggaagacgtccccttccagaggtacattgtc
cactgcgaggcccaggtgagggagccggcgtacctgcggagggagccgggaagcagcctt
tacgacctcaggtgcctgatggccaaacctccccctgctggggcggaaggagcccctgaa
ggccgtgtcaacgtgctggatgcctcccagtggccgacccaggaagccgtgggcctggat
gagtcccagctgcaagccctgaaacttgccctgaccaaggagctggccatcatccagggg
cctccggggacagggaagacctacgttgggctgaagatcatggaagtcctgctgaaaaac
aaggccgcccgcggagagacccccatcctcgtggtctgctacaccaaccatgccctggac
cagttcctggaaggaatccaggcgttccagccgacgggtatcgtgcgggttggtggcagg
agcaacagcgagaagttgaagccgttcaccctgcagcagctgcggggcagaagcgacttc
ttgagaggcctgcctggccacctccggtggtcctacagtgatatcacctgcgagatgcgg
gaggccgagtccgaactcagccgaggggcggctcagctggagtgcgggctgcacgggatt
ctgcacgagaagcacctgcggagctgcatctccagccggcactgggagagcctcgtgagg
ggcctggaagaggactggatggatccaaagcactctctgatcctggagtggctgggactt
ggcgccacgccggttgaaaacatggccgatccaggatggccagaaaatgcaggcgttgag
gaggaccaggaggcgggggaaggcccacagacagagccagagctgctgcaggtcgtggag
gaggcagacttgattcagcgcgagcggctgctggaccacgatgaggacgggcggctgcgg
aggaggaggccccccaggcacaacctggacgacctgtttctggccatgcggttggatgat
gaggagaaaggggagcagagagccccacatggggcagaaaacgctgggtttcagctgcag
ccgggccggaagaagaagatgaagcgacaagcaaaggcggaactgaaaaaatggcaggcg
atgaccaaagaggaggctgaggctgtcctggatgtgtggcagctgaacctcagctcccgc
tggaagctctacaggtactggttgcagaagcaccaagctgagatccagcgcgagatgctg
cagcacaaacagaagtaccaggcggcagccgacaggctggctgagcttcgccagcaccag
gacctctgtgtcttcaggacagcccagatcgtgggcatgacgaccacaggagccgctcgg
taccgccaggtcctgcagcaggtggcccctcgcgtggtcattgtggaagaggcggccgaa
gtccttgaggcccacgtcatcaccaccctgagcagggcctgccagcacctcatcctcatt
ggagaccaccagcagctgcgccccagcgccaacgtctacgacctggccaggaacttccac
ctggaggtttctctctttgagcggctggtgaaggtcggccttcccttcgtccgcctcgct
ttccagcaccgcatgaggccagagatcgcccagctgctcaccccgcacatctaccaggac
ctggagaaccatccctcggtgctccgctacgagaacatcaagggcgtctcctccaacctt
ttcttcgtggagcacagcttcctcgagcaggagatccaggagggccgcagccaccagaac
cagcacgaggcccagtttgtggtggagctgtgccgctacctgctgcgccagggctaccag
ccctcccagatcagcatcctcaccacctacacggggcagctcttttgcctgcgccgcttg
ctgccggccaaggagttccagggcgtcaaggtccacgtggtggacaagtaccagggggag
gagaacgacatcatcctgctctccctggtgcgcagcaacctggcggggcgggtgggcttc
ctgcagatccccaaccgcatctgcgtggccctttcccgcgccaaaaagggcctctactgt
gtgggcaacatgggcatgctcagccaggtgcctctctggagcaggatcctgcacactctg
cgcgagaagggccacgtgggccgggcgctgcgcctggcctgccagaaccacccgcagacc
aagacggacgtggtgcaggcagaggacttccgccaggtgcccgaggggggctgcagcatc
ccctgtgacacccgcctgggctgcggccatgtctgcccccgggcatgccacccctacgac
ccgcagcacaaggagctccgctgcttgaagccctgccagaaggtgctgtgtgacaacggg
caccgctgcccctggctgtgctgtgagccctgcggaaagtgccaggtgaaggtgcccaag
acggtgcccaggtgcggccaccagcaacaggtcccctgctcaatggccgccaaggatttc
tgctgcaaggagccctgcgggaaaaccctggagtgcgggcatgcctgccggctcacctgc
ggccagcagtgcgagaggcgctgcccagagctggtcctggcgacgctgccatgtgggcac
agccaggaggtgccatgttcagcagcgtcagagatggcatacgggcgtcccatccgctgc
aatacgaagtgcgacagcatcctggagtgtgggcatccttgcccaggctcgtgccacaca
tgctttgggggccgcttccaccagccgtgccggagcccctgcaagcgcccgctggtttgc
ggccaccagtgccgccagccctgcaccagggactgccccccgtgccgccagccctgccag
aaccgctgcatccacagccgctgccccaagcagtgcggggcgccctgctcgccctgcatg
gagccctgcgagtggcgctgccagcaccaccagtgtgggcgcctgtgctccgagccctgt
gaccggccgcgctgtgacgtgccctgccccaagcgcctcccttgcgggcacccttgtgcc
gggctgtgtggggagccctgcccgcagaagtgcctgacctgtgacgcggaggagctgacg
cagatcttctttggctgcgaggatgagccggacgcccgctttgtgcagctggaggactgt
gggcacatcttcagtgcgctgggcctcgaccgctacatggatggcgacgaggaggaagag
gaaggggctgtccggctgaaggtgtgccccagctgccagacgcccgtccggaagagcctg
cgctacggcacgctggtgaagaggagcctggcagaggtggaggtggtgaaggggcgcatg
cagggcagctcggcagagatcgcctcgggcgccctccagctggtgagggcgctccagcag
gagaccaccctgaggcgccacctgaccaggcagcacaagcagctgagggagaggctggag
gatgactccctctccgccagcaccctggggctggtggagaccctctttggcttctacgcg
caggtggcaggcttgatggccaatgtaggaaagttggcgcagcaggagcaggagggcgtg
aggaggcgcctggccgaggtggctggctggctagaccagccccgcgacagcttcagcggg
cagcaggtgtctgagctgaggaccgagctgcggcggatgacctacctggtggagctcctg
gcgaggtgcagcaccgctggggagaaggcgagccgggcccccggcacagtggagctggtc
agcgcggcccggaaggtcctggaggggcctggcagattcagccccgaggccgagagcgag
gcgaaggccaagctgaaggagctggaggccgccctgcccaccgtcgccgggctgggcatc
tccgaggaggaaaggaagcagattgtggcggccgtcagcggagccacccgcgggcactgg
ttcaagtgccgcaacgggcacttctacgtcattggcgagtgcgggggggccatggagacg
acccgctgcccggaatgccgggagaccattgggggcgagcgccacacgctggagtccagc
aaccggctcgcccctgagatggacggggcaacccacgctgcctggtccgaggagaccaac
cgcttgaacttgaataattacctgcactag
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integrated database retrieval system
