Podarcis raffonei (Aeolian wall lizard): 128416743
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Entry
128416743 CDS
T09310
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128416743 (DDX27)
03009 Ribosome biogenesis [BR:
praf03009
]
128416743 (DDX27)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128416743 (DDX27)
Spliceosome [BR:
praf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128416743 (DDX27)
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
Pre-60S particles
Helicases
128416743 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
FerA
PRK
Motif
Other DBs
NCBI-GeneID:
128416743
NCBI-ProteinID:
XP_053250800
LinkDB
All DBs
Position
6:complement(99878839..99893482)
Genome browser
AA seq
764 aa
AA seq
DB search
MELGEGWRARLGGPGGEEAEEEEESGSETEEVSVGRGGRGGDFAAGFAFAEASAGPSGGP
WAEVLRQLKGKRSATSLDEKIATVRKKRKAQEKQAKRGPAKEDAGEATQENVDKVDAGGS
EEEDAKEEEEEELESEYSSADESIFTKADTLKVKQRRKRKRGGEEEPEQFFEDASQYDDS
LSFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVL
ERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFTSVTACLAVGGLDLKTQEAALR
SGPDILIATPGRLIDHLHNCPSFHLDSVEVLILDEADRMLDEYFEEQMKEIIRLCSQHRQ
TMLFSATMTDEVKDLASVSLKNPVRVFVNSNTDVAPFLRQEFVRIRPSREGDREAIVAAL
LTRTFLDHVMLFTQTKKQAHRLHILLGLMGLRVGELHGDLSQAQRLEGLRRFKDEQIDVL
VATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE
IVKAAKAPVKARVLPQDVILRFREKIEKLESDVYAVLRLEREERELQHSEAQINTAKRKL
ETSAQEGAEGAARSWFQSREERKKEKLAKALQEFDLALRGTKKRKKFMKESQKKAAQLTP
EERSQFEILKSQMYAERLAKRNRRPKRARAIPEEAPSAAAKGGPRQQHKKKTSVFDEELT
NTSRRALKQYRAGPSFEDRKRLGLGSRRKGGNFRAASSRYKRKK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagctcggagaaggatggcgggcgaggctgggcgggcccggcggcgaggaggccgag
gaagaggaggagagcggctccgagaccgaggaggtgtctgtgggccgaggcggtcgcggc
ggagacttcgcggcaggctttgcgttcgccgaggcgtcggcggggcccagcggaggcccc
tgggcggaggtgctgaggcagctgaaggggaagagatccgctaccagcctggacgagaag
attgcaactgtaagaaagaaaagaaaagcccaggaaaagcaagctaaacgagggccagca
aaagaagatgctggggaggctacacaggagaatgtagacaaggtggatgctggaggaagt
gaggaggaagatgcaaaggaggaggaggaggaggagttggagtctgagtactcttcggca
gacgagagcatcttcacaaaagctgatacactcaaggtgaagcagcgacggaaaaggaag
cgaggtggagaggaggaacccgagcagttctttgaagatgcttcacagtacgatgacagc
ctgtcgttccaagatatgaacctctcccggcccttgctgaaggcaataaccgccctgggc
ttcaagcagccgacccccatccagaaggcctgcatccctgtggggctcctggggaaggac
atctgcgcatgtgcggctacagggacagggaagacagcggccttcattctgcctgtgctg
gagcgcctgatctacaagccccgccaagccccagtgacgcgggtgctggttctggtgccc
acccgggagctgggcattcaggtgcactctgtcacgaagcagctggcgcagttcaccagt
gtcaccgcctgcctggccgtggggggcctggacttgaagacccaggaggcggcgctgcgc
tcgggccccgacatcctcatcgcgacccctggacgcctcattgaccacctgcacaactgc
ccctccttccacctggacagcgttgaggtcctcatcctggacgaggctgacaggatgctg
gatgagtactttgaggagcagatgaaggagatcatccggctgtgttcccaacatcgccag
accatgctcttttctgccaccatgacagacgaggtgaaagacttggcctccgtttccttg
aagaaccctgtccgggtctttgtgaacagcaacacagatgtggccccgtttctgcgccag
gagtttgtccgcatccggcccagccgtgagggagaccgggaggcgattgtggcagccctg
ctgactcggacattcctggaccacgtgatgctcttcacgcagaccaagaagcaagcgcac
cgcctgcacatccttctgggcctgatgggcctccgtgtcggggagctgcatggcgacctc
tcgcaggcgcagcgcctggaagggctccggcgcttcaaggacgagcagattgatgtgctg
gtggccacagacgttgcggcacgaggactggacattgaaggtgtcaaaacggtgatcaac
ttcactatgcccaacaccaccaagcattacgtgcaccgcgtggggcgcacagcacgcgca
gggcgggccggccgctccgtctccctggtgggcgaggaggagcgcaagatgctgaaggag
attgtgaaagccgccaaggcgcccgtcaaggccagggtccttccccaggatgtgattctg
cgcttccgggagaagattgagaagctggagtcggacgtctacgctgtgctgcgcctggag
cgcgaggagagggagctgcagcactcggaggcccagatcaacactgccaagcggaaactg
gagacaagtgctcaggaaggggcggagggcgctgcccgcagctggttccagagccgcgag
gagagaaaaaaggagaagcttgccaaggccctgcaggagtttgacttggcgctgcgaggc
accaagaagcggaagaagttcatgaaggagtctcagaagaaggcggcccagctgacgccg
gaagagcggtcccagttcgagatcctgaagtcccagatgtatgccgagcgtctggccaag
aggaatcgccggcccaagcgtgccagggccatccccgaggaggctccgtccgcagcggcc
aagggagggcccaggcagcagcacaagaagaagacgtccgtgtttgatgaggagctcacc
aacaccagccggagagccctgaagcagtatcgggcggggccctcgttcgaagaccgcaag
cgcctgggtcttggctcaagaaggaaaggagggaatttcagagcagccagctccaggtac
aagaggaagaagtga
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