Podarcis raffonei (Aeolian wall lizard): 128416940
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Entry
128416940 CDS
T09310
Symbol
CDHR5
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128416940 (CDHR5)
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Cadherin related
128416940 (CDHR5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128416940
NCBI-ProteinID:
XP_053251009
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Position
1:77204782..77225962
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AA seq
928 aa
AA seq
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MAFFRQSCTWVLFFLLSAIHVQAQNSDCGVQDNVVNIQENNPPGALITNINTADGVTVRI
NPLVLNGDQFEIQNSQLLLKNSVDYEVSTALVVELQCFRADIVVNSITVVVNIIDVNDNP
PVFPETNITVNVREDIAVNTTVVPQANVTAKDADKDTIYYNLTADPPVGLEYFNIEGVNN
PQIYLLKTLDYEKINYMQFVLYAMDGKAGEAPHTATATITIHILQADLRPPWFQPCTPFG
GNIMCINTGYTGKVNISENMNESLVLEPGPLSAIDGDRDLNEKVEYAIADGNDDTFSIDK
DSGEITMNKTVNTLKTFMLYVVAFQTNNPYRYSQTTVEIKVVRKNDHKPYFEKTLYAGTV
SVGLPVPSLVMEAGRPSVPLRIFAADDDFTDKFNPDIKYQIQNSTNFTVTVDGFLLTAVV
LDVASTVTLLAIANDTATLQEDSTLITVDVKPLETPTILPTAITTTGAGTTISDISDLPP
GTITTLPITPSASTTRNTAITEKPATGPTSDSVIPPFVTTTKSPIITGSTLEPQTASSPI
TGISQATDRTDESTAETTFQSGVTEPSISTATGGTVQTVTSASSQTGTTTTHPITDISPA
TDKRSTANTPSQAGTTTKHPITGESPATDDIGQSTTKAPQTETTKVTDTTVSSTVPTPLY
NGTTTYTTGDATRTTTLSITTSSSDNQTTSIPTEQSCQYRTEDMAAVGTTLGCLLLVTLV
LLGLVSYKYHKLKQRYGEDTESVKGLINSSFESDEKPNSGGKEDKLPASVKSEDDKPVAE
KRSGTLSPLEKTAGNSQESAASEGKEGNGDTGKEGEEGNGDTDSEKEVRSILTKDRRMSD
DGYKAVWFKEDIDPEAKDDVLMIENDSDTEQKGNESDSDNADDQAGDDEVGDGGKGGSDR
SFTLGRAQLPEIDSTDDLQDTEGDGVFL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctttcttcaggcagtcctgtacctgggtgcttttcttcttgctgtcagcaattcat
gttcaggcacagaattcagattgtggtgtgcaagataacgttgttaatatccaagagaat
aatcctcctggggctttgattaccaacattaacacagctgacggtgtcacagtaagaatt
aacccattggtattgaatggtgaccagtttgagattcagaactcacaactgctcctgaaa
aattcagtggattatgaggtttcaacagcgctagttgtagaactacagtgcttcagagcg
gatatagtcgtaaatagtattactgttgtagtgaacattattgatgtgaatgacaaccct
cctgtgtttccagaaaccaacatcaccgtcaatgttcgagaggatatagcagtgaacacg
actgttgtgccccaggctaatgtaacagctaaggacgctgacaaagacacaatatattac
aaccttacagcagatccaccagtaggactggagtattttaacattgaaggagttaataac
ccgcaaatttacttgctcaaaaccttggattatgaaaaaattaactacatgcaatttgtc
ttatatgccatggatgggaaggctggtgaagctccacacacagccactgcaacaataacc
atacatatcctacaggctgacctgagacctccctggttccagccatgcactccttttgga
gggaatataatgtgcatcaacacgggctacactggcaaggtcaacatttcggagaatatg
aatgagtctttggtcttggagccaggacccctctctgctattgatggggacagagatttg
aatgaaaaagtagagtatgcaattgctgatggaaatgacgacacgttctcaatagacaag
gattctggggaaataacaatgaacaagactgttaacactctgaagactttcatgttgtat
gttgtggctttccagaccaacaatccatacagatattcccaaacaacagtggaaatcaag
gttgtgcgtaaaaatgaccacaagccgtactttgagaaaaccctttacgcaggaactgtg
tctgtgggcctgcctgttcccagcctggtcatggaggctgggagaccttcagtgcccctg
cgcatctttgctgcggatgatgacttcactgataaattcaatcctgatatcaaataccaa
atccaaaacagcacgaatttcacagttaccgtagatggatttctcctgactgctgtagtt
ttggatgtggcctccaccgtcacccttttggctattgctaatgacacagctactctgcaa
gaggacagcaccctcataactgtagatgtcaagcctttagaaactccaaccattcttcct
acagccatcactaccacaggggcagggaccactatttcagatatttcagatttaccacct
gggacaatcactactcttcctataacaccttctgcaagtacaaccaggaatactgccatt
acagagaagcctgcaacaggcccaacatctgactcagtcatccctccttttgtaactaca
acaaagtctcccataatcacaggtagcactttagaaccccagaccgccagttctcccatc
actgggataagccaagcaacagataggactgatgaatctactgctgaaacaacttttcag
tctggagtaactgagccttccatatccacggcaacagggggaacggtccaaactgttact
tcagcttcttctcagactggaaccaccaccacacatcccataacagatataagcccagca
acagataaacggtcgactgcaaatacaccttctcaggctggaactaccacaaagcatccc
ataacaggtgagagtccagcaacagatgatatagggcaatctactactaaggcacctcag
acagaaaccaccaaagtaactgatacgactgtttcttccactgttccaacacctctctat
aatggaacaaccacctataccacaggagatgcaactagaacaaccaccctatcgataaca
acttcatcttctgacaaccaaacgacgtccattccaacagaacagagttgtcagtataga
acagaggacatggctgctgtgggcaccactttgggatgcttactgctagtcacattagtg
ttgcttggactggtctcctacaagtatcacaaactaaaacaaagatatggagaagacact
gaatctgttaaaggcttgatcaacagcagctttgaaagcgatgagaaacccaactcaggt
ggaaaggaggataagttgccagcaagtgtgaagtctgaagacgacaaaccggttgcagag
aagcggtcaggcaccctgtctcctttggagaagacagcgggaaacagccaggaatcagca
gcttctgaaggtaaagaaggcaacggggacacaggcaaggaaggtgaagaaggcaacggg
gacacagacagtgaaaaggaagtaagatccatcctcactaaagacagaaggatgtcagac
gatggctacaaagcagtgtggtttaaagaagacattgacccagaagctaaggatgatgtt
ttgatgattgaaaatgacagcgatacagaacagaaagggaatgagagtgacagtgacaat
gctgatgaccaggctggtgacgatgaagttggtgatggtggcaaaggtggcagtgacagg
tccttcactctaggaagagctcaactcccagaaattgattctactgatgatcttcaggat
acagaaggagatggtgtttttttgtag
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