Podarcis raffonei (Aeolian wall lizard): 128416945
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Entry
128416945 CDS
T09310
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04620
Toll-like receptor signaling pathway
praf04621
NOD-like receptor signaling pathway
praf04622
RIG-I-like receptor signaling pathway
praf04623
Cytosolic DNA-sensing pathway
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128416945 (IRF7)
04621 NOD-like receptor signaling pathway
128416945 (IRF7)
04622 RIG-I-like receptor signaling pathway
128416945 (IRF7)
04623 Cytosolic DNA-sensing pathway
128416945 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128416945 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128416945 (IRF7)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128416945 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
128416945
NCBI-ProteinID:
XP_053251022
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Position
1:77251994..77268611
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AA seq
563 aa
AA seq
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MAAPASERGRQKVRFFDWLINEINSGRYKESVAWTDDTHTTFRILWKHNSRKNLVASDYK
IFQAWAMVSGKYNEGVPDPARWKTNFRCALNSTKRFEEVVSEYPDYHVYRIIPRSRNSTS
PVNPPADTINESNHEVDQLHMSPCSEGSPALHQSTSQQEIDDIFKSLSLENPCPDVLQWV
LQQAGMDEVSQVSWAPVPEHPLAGEVAHTIPCIDQNSCLPLVPGVVSEPLANNCCKVADG
WLAAHPPNVHSQPIAVHPLQHPQQNRPPGINQVNHVGEALYNNNFIEHVFLNEEPQGNGV
MNNLSRNDCHLFPNQQAMVEQNTFAPPIAPSPLEQPPLHAAPLQNNAGCAPLNLDVSIYY
RGKLLHEAGVEFNSCMFTYNPYYEIGGNPQIQHVLFPNPEILPDQKQVNHTLTLLKNVGL
LLYQKNNKICAWRIGRCKVFWAFSKELDHTAPRPPTRLLGREEETDIFNYERFCQELRAF
RDGQRCSSPDYTIYLCFGQSFASDKPKESKLILVKLVPMVCKQWHEDLQRQGFSSLNSEN
LSLQLSNSLFDIIEQLTTMMEMD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccagcaagtgagaggggtcgtcaaaaggtccgtttctttgactggttgatc
aatgagatcaacagtggaagatataaagaaagcgtggcctggactgatgacacccacaca
acctttcgtatcctttggaagcacaattcaaggaagaaccttgtggcaagtgattacaag
attttccaggcgtgggctatggtcagcggaaagtacaatgaaggtgtaccagacccagcc
agatggaaaaccaacttccgctgtgccttaaacagtacaaaaagatttgaagaagttgta
tcggaataccctgactaccacgtgtaccgaatcatcccccgcagccgcaactctacatcg
cctgttaatcctcctgccgacacaatcaatgaaagtaaccatgaagttgatcagttgcat
atgagcccctgcagtgagggatccccagctctacaccagtctacatcccagcaggagatt
gatgatatttttaaatccctgtcactggaaaatccatgcccagatgtgctccagtgggtt
ttgcagcaagctggcatggatgaagtttcacaagtctcctgggcccctgttccagaacat
cctctagcaggggaagttgcacatacaatcccttgtatcgaccaaaacagctgcttgcct
ctggtgcctggagtagtgagtgaaccactagcaaataactgttgtaaagtagcagacggc
tggctggctgcacatccaccaaatgtgcattcccagccaattgccgttcatccactgcag
catcctcaacaaaatagacctcctgggataaatcaagttaaccatgtgggagaagccctg
tataataacaacttcattgaacacgttttcctgaatgaagaacctcagggaaatggagtg
atgaacaacctgtcgagaaatgactgccatctgtttccaaaccagcaagccatggtggaa
cagaacacatttgcacctccaattgccccctctccactagagcaacccccccttcatgct
gctccactgcagaacaatgcaggatgtgcccctctcaatctggatgtctctatctactac
cgcgggaagctgctgcacgaagcaggagtagaatttaatagctgtatgttcacatacaac
ccatactatgaaattggaggaaacccgcagatacaacatgttctgtttccaaacccggag
atccttcctgatcaaaagcaagttaatcataccttgacactactgaagaatgtgggtctg
ctgctgtaccagaagaacaataagatctgtgcctggcgaattggtcgatgtaaggtcttc
tgggctttctccaaagagttggaccatacagcaccgcgtcctccaaccaggctgttggga
cgggaggaagaaactgacatcttcaactatgaaagattctgtcaagaactgagggctttc
cgcgatggtcagagatgttcctctcctgactacaccatctacctgtgctttggccagtcc
tttgcatctgacaaacccaaggaatccaagctcatcttggtgaagttggtgccgatggtt
tgtaagcagtggcatgaagacctgcagaggcaaggcttctcatccttgaacagtgaaaac
ttgagcctgcaactctccaacagcctgtttgatataatagagcagctaactaccatgatg
gagatggattag
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