Podarcis raffonei (Aeolian wall lizard): 128417110
Help
Entry
128417110 CDS
T09310
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128417110 (SNTB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PH_9
Motif
Other DBs
NCBI-GeneID:
128417110
NCBI-ProteinID:
XP_053251347
LinkDB
All DBs
Position
7:15427380..15526693
Genome browser
AA seq
562 aa
AA seq
DB search
MAVAAAGGGGGVGRVQRSGALEVLVRDRWHRVLVSLSDEALVLSADDGGAPAAAAYNGIG
ASGSNGNGTFCSGAALGPASGGASAACSLSSGGSPESPSGGGGGMSPKSGLMSGVRTAFT
DLPEQVPEAISNKKRCVKVLKQEMGGLGISIKGGKENKMPILISKIFKGLAADQTQALYV
GDAILAVNGTDLRDATHDEAVQALKRAGKEVALEVKYMREATPYVKKGSPVSEIGWETPP
PESPRLGNASTDPLSQLSLSIHRDKKTIPLKMCYVTRNMAVSDPENRLVEVHSPDARHTL
VLRSKDSATAQAWFHSIHSCISDLIPKAISEVKDQLGKAGIAGAREIRHLGWLAEKVLGE
NERHWKAVLVVLTEKDLLMYESMPRIKEAWFSPLHSYPLLATRLVHSGAGKGSPQAGMDL
SFATRTGTRQGIESHLFRTETGRDLSLWTRSIVQGCHNAAELSMEITAACTYKSQECRLT
IHYEHGFSLAAEPQDGAFPKTILQFPYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCP
KPIVFVIHSFLSAKITRLGLVA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggccggagggggaggcggcgtcggccgggtgcagcgcagtggcgcg
ctggaagttttggtgcgcgaccggtggcaccgggtgctggtgagcctgagcgacgaggcg
ctggtgctgagcgccgacgacggtggcgctcccgccgccgccgcgtacaacggcatcggg
gcgtcgggcagcaacggcaatgggactttctgcagcggggcagcgctgggtccggcgtcg
gggggcgcctcggccgcctgcagcctttccagcgggggttctccggagtcgccgtcgggg
ggcggcggcggcatgagccctaaatcgggtttgatgagcggggtgcgcacggctttcacc
gacctgcccgagcaagtccccgaagctatctccaacaagaagcggtgcgtcaaggtgctc
aagcaggagatgggcgggctgggcatcagcatcaaggggggcaaggagaacaagatgccc
atcctgatcagcaagatcttcaaagggctggccgccgaccagacccaggcgctctacgtc
ggggatgccatcctggccgtcaacggcacggacctgcgcgacgccacccacgacgaagcg
gtgcaagcgctcaagagggcgggcaaggaggtggcgctggaagtgaagtacatgagggaa
gccaccccctacgtcaagaaagggtctccggtttctgaaattggctgggagaccccccca
cccgaatctccgcggctggggaacgcgtccaccgaccccctgtctcagctgtccctctcc
atccacagagacaaaaagacgatcccgctcaaaatgtgctacgttacgcggaacatggcc
gtgtcggacccagaaaacaggctcgtagaagttcattcgccagatgccaggcacaccctg
gttctaaggagtaaggattccgccacagcgcaggcctggttccactccatccactcctgc
atcagcgatctcattcctaaggccatctcggaggtcaaagatcagctgggcaaagcagga
attgctggagctcgagagatcaggcacctcggctggctcgcagaaaaggtgctgggagag
aacgagaggcattggaaagctgtgcttgttgtactgactgagaaggatctcttgatgtac
gagagcatgccacggatcaaagaggcttggttcagtcctcttcattcataccctctgctg
gccaccaggttggtacattccggagctgggaaaggctccccccaggctgggatggatttg
tcctttgctacccgtacgggtacgcggcaaggaatcgaaagccatctcttcaggacggag
accggcagggacctctcgctgtggacgcggagcatagttcagggttgtcacaatgctgcg
gaactctcaatggaaatcactgccgcttgcacctacaaaagccaggaatgccgtctgacc
attcattacgaacacggattctccctcgcagctgaaccccaagatggtgccttccccaaa
accattctacagtttccctacgaaaagctaaaaatgtcctcggacgatgggattcggatg
ctttacttagacttcggaggaaaggaaggagaaattcaactggaccttcactcttgtcca
aagccaattgtgttcgtcattcattcattcctttcggccaagattacaagacttgggttg
gtagcataa
DBGET
integrated database retrieval system