Podarcis raffonei (Aeolian wall lizard): 128417113
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Entry
128417113 CDS
T09310
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
praf00535
]
128417113 (COL14A1)
Proteoglycans [BR:
praf00535
]
Extracellular matrix (ECM) proteoglycans
Others
128417113 (COL14A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
vWA_SIBA-E
Copine
Rubredoxin_C
Motif
Other DBs
NCBI-GeneID:
128417113
NCBI-ProteinID:
XP_053251350
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All DBs
Position
7:complement(15609253..15751090)
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AA seq
1893 aa
AA seq
DB search
MTREKTHRWFKMLSWFLFVFIAITTQLMTHVRGQVAPPSRLRYTVVAHDSVQISWKAPKG
QIDGYRLLVTPNAGGKTNELTLQNNANKAIIQGLIPDQGYTVQIVALAKDQESKAAQGQF
RIKDIEKKKETSGKPKVKPATPTKDIESTQLPEVEENQFKCKTPAIADIVILVDGSWSIG
RFNFRLVRLFLENLVAAFNVGSEKTRIGLAQYSGDPRIEWHLNAYSTKEAVLDAVRNLPY
KGGNTLTGLALTFILENNFKPEAGARPGVPKIGILITDGKSQDDVIPPAKNLKDAGIELF
AIGVKNADENELKEIASEPDSTHVYNVADFSFMNSIVEGLTKTVCSRVEEQEKEIKGTLV
ATLGAPTDLVTSEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVHGSDSTAVLK
NLMSITEYQIAVFAIYITSASEGLRGTETTLALPMASDLELYDVSHSSMRVKWNRVAGAT
GYMILYAPLTDGLAADEKEMKIGESSTDIELEGLLPNTEYTVTVYAMFGEEASDPLTGQE
TTLPLSPPQNLMFSNVGHNSAKVTWDPASKKVKGYRIMYVKTDGTETNEEEVGRVSTHTL
QSLTSLTEYTVAIFSLYDEGQSEALTGSFTTKKVPSPQYLEINEVSTDSFTVSWKLPSSD
VALLRLAWIPLGGEEAEEIVLSGEVDTYEIEGLLPSTEYEVSLVAIFDDESESDVIAVLG
TTLEVTTTEMTTITTTSTTTFRPTTAVFRTGIRNLVIDDETTSSLRVKWDISDYNVRQFR
VTYLTADGDRGEEAVRTVMVPARQNSLLLQPLLSDTEYKVMVTPIYSDGEGVSLSAPGKT
LPLFAPQNLRVSDEWYNRLRISWDAPPSPTMGYRIVYKPVNIPGPALETFVGDDISTILI
LNLLSGTEYSVKVFASYSTGFSDALAGIAKTLYLGVTNPSAYQVRMTSICAQWQLQRHAT
AYRVVIESPLDGTQEEALLGGGTPRHCFFELVPGTEYKISIHTQLQEIEGPAVSIMETTL
PFPTQPPPTPSTTTPQPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIIGFLYSTVG
ALDKIGPDGTQVAIAQFSDDPRTEFKLNAYRTKETLLEAIQHIAYKGGNTKTGKAIKHAQ
QALFTIDSGTRKGIPKVLVVITDGRSQDDVNKVAREMQLDGFSIFAIGVADADYSELVNI
GSKPSDRHVFFVDDFDAFKKIEDELITFVCETASATCPLVYKDGNSLAGFKMMEMFGLVE
KEFATVEGVSMEPGTFNAYSCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPETPE
EPFALWEILNEEYEPLVGVILDNGGKTLTFFNYDYKGEFQTVTFEGPDIKKIFYGSFHKL
HVVISKTTAKVVIDCKQVGEKMINAAGNITSDGIEVLGRMVRSRGPRDNSAPFQLQMFDI
VCTTSWANRDKCCELPALRDEETCPALPHSCSCSEVSKGANGPPGPPGGPGLRGPKGNRG
DLGPKGPDGPRGEIGAPGPQGPPGPQGPSGHSIQGPPGTTGEKGEIGEMGRPGLQGVPGA
SGSPGRDGSQGQRGLPGKDGPTGPQGPPGPVGIPGAPGVPGVTGNIGPQGDAGVPGLPGP
KGERGERGDLQSHAMVRAVARQVCEQLIQGHLARYNSILNQIPSQSVSTRTVPGPPGEPG
RQGLPGPQGEQGSSGRPGFPGSPGQPGRPGERGLSGEKGERGSPGVGTQGPRGPPGAAGP
PGESRTGAPGPPGSPGPRGPPGHTGVPGPHGASGQPGYCDPSSCAGYGTGGGYGDPTDQE
IPVVPLPHSSYQLYDSEDLYDDDDQEPYLVHGSYHHPQSPYPAPRLAQPEFTPVREEMGA
LELRSPGISRLSRRISKRSASSLRLKRKVKKTS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagagaagactcaccgctggttcaagatgctgagctggttcctctttgtcttc
atagccatcacaactcaattaatgacgcacgtccggggtcaagtggccccgccgtcaaga
ttaagatacactgttgttgctcatgacagtgttcagatttcatggaaagcccctaaaggg
cagattgatggatatagactcctcgtcacgccaaatgcaggtggaaaaaccaacgagctc
actcttcaaaacaatgcaaacaaagcaattattcaaggccttatccccgatcagggctat
acggttcagattgtggcgcttgctaaggatcaggaaagcaaagcggctcaaggccagttc
cgaattaaagatattgagaagaagaaggagacctcaggaaaacccaaggtgaagcctgcc
accccaacgaaggatattgaaagtacacaacttccagaagtagaagaaaaccaatttaaa
tgcaaaactccagccatcgcagacatagtgatcttggtggatggttcctggagtatcggc
agattcaacttccggcttgtgcgtcttttcctggagaacctggttgctgccttcaatgtg
ggatctgaaaaaacaagaataggccttgcacaatacagcggcgacccacggatagagtgg
catctgaatgcctatagcacaaaagaggctgtcttggatgcagtgcgcaacctaccctat
aagggtgggaacaccttgacaggccttgccttaacttttattttggaaaacaactttaag
cctgaagcaggtgcaagacccggggtccccaaaatcggtatattgatcacagatgggaaa
tcccaagatgatgtcattccgcctgccaagaacctgaaagacgctggcattgaattgttt
gctattggtgtaaagaatgccgacgaaaacgaactgaaggaaatcgcctctgaaccagac
agcactcacgtctacaacgttgccgacttcagcttcatgaactccattgtggaaggtctt
accaagactgtgtgctcaagagttgaagaacaggaaaaggaaatcaaaggaactttggta
gccactctgggggctcctacagatttggtcacatccgaggtgacagccagagggttccgt
gtgagctggactcatgcgccaggcaaagtggagaaatacagagttgtctactaccccaca
agaggaggacagccagaggaggtggttgtgcatggcagtgactcaacagcagtactgaaa
aacctgatgtctataaccgaataccagattgctgtttttgccatatacattacttctgcc
agcgagggcctccggggtactgaaactacgctcgccttgccaatggcctcagatctggag
ctgtatgacgtgtctcacagcagcatgagagtgaaatggaacagagtagccggtgcaacc
ggctatatgattctgtatgctcctctaacggatgggctggctgcagatgagaaggagatg
aaaattggagaaagctcaacagacatcgaactggagggtcttctacccaacacagaatac
acggtcacagtttacgccatgtttggagaggaagccagtgacccgcttacaggacaagaa
acaacattacctttaagcccaccacagaacctgatgttttcaaatgtgggacacaattca
gcaaaggtaacatgggatcctgcttctaaaaaagtgaaaggctataggattatgtatgtc
aaaacagatggaacagaaaccaatgaggaagaggttggccgtgtttcaacacacactctg
cagagcctgacatccctcaccgaatatactgttgctattttctccctctatgacgaaggg
cagtctgaggcactcactggcagcttcaccacgaaaaaagttccatctccccagtatctg
gaaataaacgaagtatccacagatagctttacagtcagctggaagctgccatcctcagac
gttgcccttcttcgactggcatggattccactgggtggggaagaagccgaagagatcgtc
ctcagcggagaggtggacacatacgagatcgaaggcctcctgccaagtacagagtatgag
gtgtccttggtggccatctttgacgacgaaagcgaaagcgacgtcattgctgtccttggg
accacacttgaagtaacaactactgaaatgaccaccataaccacgactagtaccacaact
ttcaggcctacaacagcagtctttcgaacaggaataagaaatctcgtcatagacgacgaa
actacctcaagcttgagagtcaaatgggacatttcggactacaatgttcgtcagttcagg
gtgacgtacctcaccgctgacggggatcggggtgaggaagcggtaagaacggtaatggtc
cctgcaaggcaaaacagtttgcttcttcagcctttgctctcagacactgaatataaagtc
atggttacccccatctattctgacggagaaggtgtcagtctgtcagctccagggaaaaca
ttgcccctgtttgcacctcaaaatctcagggtgtctgacgaatggtacaaccgattgcgg
attagctgggatgcccctccatctcccacaatgggatacaggattgtatataaacctgtg
aacatccctggaccagccctggagacgtttgtgggagacgatatcagcaccatccttatt
ttgaatttgctcagtggaactgaatacagtgttaaagtatttgcttcctactcaacggga
ttcagcgatgctttagctggcatagccaaaacattgtacttgggagtgacaaatccgagt
gcttatcaagtccgcatgacaagtatctgtgctcagtggcaacttcaaagacatgcaaca
gcctatagggttgttatcgaatcaccgcttgatgggacacaggaagaagcattacttggt
ggaggaactcctaggcattgcttctttgaactcgttcctggtacagaatacaaaatcagc
atccatacgcagctccaagaaatagaggggcctgctgttagcataatggagaccactttg
ccattcccaacccaaccaccaccaactccttcaaccaccactccacagcctacaattcct
cctgcaaaggaagtttgcaaagctgcgaaggctgaccttgtctttttggtggatggctca
tggagtatcggagatgacaatttcaacaaaatcattggcttcctgtacagcactgttgga
gctcttgataaaattggccctgatggaactcaggtggccattgctcagttcagtgatgat
cccaggacagaatttaaactgaatgcctatcgaacgaaagaaacacttctggaggccatc
cagcacatagcatacaagggaggaaataccaaaacaggcaaggcaattaaacatgcccaa
caggccttatttactattgactcagggaccagaaaggggatcccaaaggttttggtagtg
atcacagatgggcgatcacaggatgatgtgaacaaagtcgccagagagatgcagttagat
gggttcagcatatttgccattggagtagcagatgctgactattcagaactggttaacatt
ggcagcaagcctagtgacaggcatgtcttctttgtggacgactttgatgcctttaagaag
attgaagatgaactgatcacttttgtctgcgagacagcatcagcaacttgcccattggtt
tataaagatggcaacagcctagcaggattcaaaatgatggagatgtttggtttggtggaa
aaagagtttgcaactgtggaaggggtttctatggagcctggaacatttaatgcctactcc
tgctacagactgcataaggatgctttggtttcccagccaaccaaatatctacacccagag
ggacttccttcagattataccattacgtttctcttccgtatactccctgaaacgcccgag
gaaccgtttgctctctgggagattctgaacgaagaatatgagccactggttggagtcatt
ttggataatggtggcaaaacattgactttcttcaattacgactacaaaggtgaattccag
actgtcacttttgaaggacctgatataaagaaaatattttatggaagtttccataagttg
catgttgtcatcagcaaaactacagctaaagttgtgattgattgcaaacaagtgggtgag
aagatgatcaatgcagcaggcaatattacttctgatgggatagaggtactgggaagaatg
gttcgatcgagagggccaagagacaactctgcaccattccagctgcagatgtttgacatt
gtctgcaccacctcatgggccaacagagataaatgttgtgaacttccagctttgagggat
gaagaaacctgccctgccctacctcattcttgctcctgttctgaagtcagcaagggagct
aatggaccccctggaccaccgggtggtccaggtctccgaggtccaaaaggtaacagaggt
gaccttggcccaaagggaccagatggacctcgtggtgaaattggagctcctggtcctcag
gggcctcctggaccccaaggaccaagtgggcactccatccaaggacctccgggaacaact
ggcgaaaaaggagaaattggagaaatgggccgccctggcctacagggggtcccaggagca
tctggatccccaggacgagatggaagccaaggccaaaggggcctcccaggcaaagacgga
cccactggccctcaagggccaccagggcctgtgggaatacctggtgctccaggtgtacca
ggagtcaccggcaatattgggccacaaggcgatgctggagtacctggacttcctggacca
aaaggcgagaggggtgaacgtggagacctccagtcccatgccatggtacgggcagtagcc
cgtcaagtatgtgaacagcttatccaaggtcacctggccaggtataactccatcttaaat
caaattccaagccagtctgtctcaacacgaactgtccctggaccccccggtgaaccaggg
aggcaagggttacctggacctcaaggagaacaaggatcttcgggaaggccaggatttcca
ggcagtcctggccagcctggaagacctggtgaaagaggtttatcgggagagaagggagag
cgagggagcccaggtgttgggacccaaggcccccggggaccaccaggggcagcagggcct
ccaggcgaaagccgtacaggcgccccaggaccaccgggttcaccaggtccaagaggacca
cctggccatacaggtgttcctgggccgcatggcgcctcagggcaaccaggatactgtgat
ccctcttcctgtgctggatatggaacaggtggtggctatggggacccaactgatcaagag
atccctgtggtgccgttaccgcacagctcctaccagctctatgactccgaggacctttac
gatgatgatgatcaagagccttatctagtgcatggatcctaccatcacccgcagtccccc
tacccagcacctcgcttggctcagccagagttcacacctgtgcgggaagaaatgggggct
ctcgaactgagatcccccggaataagccgcctttcaagaagaatctccaaaagaagcgcc
agttctctgaggctcaagaggaaggttaagaaaacctcttaa
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