Podarcis raffonei (Aeolian wall lizard): 128417116
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Entry
128417116 CDS
T09310
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128417116 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128417116 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128417116 (TAF2)
03036 Chromosome and associated proteins [BR:
praf03036
]
128417116 (TAF2)
Peptidases and inhibitors [BR:
praf01002
]
Metallo peptidases
Family M1
128417116 (TAF2)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128417116 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
128417116 (TAF2)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128417116 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
SR-25
AP3D1
Motif
Other DBs
NCBI-GeneID:
128417116
NCBI-ProteinID:
XP_053251355
LinkDB
All DBs
Position
7:15860323..15919963
Genome browser
AA seq
1197 aa
AA seq
DB search
MMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQ
CRIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIK
VPSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPNVEGSLAERGAHVFSCGYQNSTRFW
FPCVDSYSELCTWKLEYTVDATMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISL
AIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFV
DEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWV
LKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVVYELKTGGVLLHPIFGGGKEKDNPAS
HLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQ
SHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIK
QDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNG
EEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQEESILAL
QKFPTPASRLALTDILEQEQCFYRVRIMACFCLAKIANFMVSTWTGPPAMKSLFTRMFCC
KSCPNIVKTNNFMNYQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKF
SDNYYRAELIDALANSVTPAVSVNNEARTLDNLNPDVRLILEEITRFLNMEKLLPSYRHT
ITVSCLNAIRILQKNGHVPSDPAVFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQW
LLSMVQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRC
GAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAGASGPEPPNNPNNLGQ
IVGFQSTDDDHIAKEAAVIPLPHQQGLKRKADTPLGSPLEPGQILEKNEDSKVKLKIRFS
NSQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSQELSMLPIPVPTLPGFTKESS
SSKHSEHHHHHKKKKKKHKHKHKHKHKHDTKEKEKEPFTFSNSPASGRSIRSPSLSD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaggaagaaaggagacaaggggtttgagagcccaagaccttataaattaacc
caccaggtggtctgtatcaacaacataaatttccagagaaaatctgttgttggttacgtg
gagctgacaatatttcccacagttgcgaatctcaatagaatcaagctgaacagtaaacaa
tgtaggatatacagagtgagagtcaacgatctggaagcagctttcatttataatgacccc
acgctggaggtttgtcaccatgagtcgaaacagagaaatctcaactacttttccaatgcg
tatgctgctgcagtcagtgctgtggacccggatgctggaaatggagagctgtgcatcaag
gtgccatcagagctttggaagcacgtcgatgaattaaaagtcttgaaggtacatatcaat
ttttctctggaccagccaaaaggaggccttcattttgtggtacccaacgtggaaggaagc
ttagcagagagaggggcccatgtcttctcttgcgggtatcaaaattctacaaggttttgg
tttccttgtgttgattcatactctgaactatgcacatggaagctggaatatactgtggat
gccacaatggtggctgtctcaaatggagacctggtggaaacggtgtatactcatgatatg
agaaaaaagaccttccattatatgctgacaattccaactgcagcatcgaacatctccttg
gccatcggaccatttgaaatccttgttgatccctacatgcatgaggtgactcatttctgt
ttaccccagcttctcccgctgctcaaacacaccacatcttatctccatgaagtatttgaa
ttctatgaagagatacttacgtgccgctatccttactcctgtttcaagacggttttcgta
gacgaggcttacgttgaagtagctgcttacgcttccatgagcatttttagcacaaacctt
ttgcacagtgcaatgataatagatgagaccccgctgaccaggagatgtttggctcaggct
ctggcccagcagttttttggctgtttcatatctagaatgtcttggtcagatgagtgggtg
ttgaagggaatctctggctatatttatggcctctggatgaagaaaacctttggtgtaaat
gagtatcggcactggatcaaggaggaactggacaaaatagttgtgtatgagctgaagacc
ggtggagtcttacttcatccaatctttggtggaggaaaagaaaaagacaaccctgcgtca
cacctgcatttttctataaagcatcctcacacattatcatgggagtactacactatgttc
cagtgcaaagcccacctagtcatgagactcatagaaaacagaataagcatggagttcatg
ttacaagttttcaacaagctcttgagcctggccagcactgcctcatctcagaagttccag
tctcatatgtggagtcagatgctggtttccacatctggatttttgaaatccatctccaat
gtctctggcaaagacattcaaccgttaataaagcaatgggtagatcagagtggtgtggta
aagttttatggcagctttgcatttaatagaaaacgaaatgtactagagttagaaataaaa
caagactatacatctcctgggacacagaaatatgtgggccccttgaaagtgacggtgcaa
gagctggatggatctttcaaccacacgcttcagatagaagaaaacagccttaaacatgac
ataccctgccactcgaaaagcagacgaaataagaagaaaaagattcctctgatgaatggg
gaggaagttgacatggatctttctgccatggatgctgattcccccttactctggatcaga
atagacccggatatgtctgtactgaggaaggtagaattcgaacaggctgacttcatgtgg
caataccagctccgatacgagagagatgtggttgcacaggaagaatccattttggcccta
cagaagttccctactccagcttcacgccttgcgctgactgatatacttgaacaagagcag
tgcttctaccgagtgaggataatggcatgcttctgccttgcaaagattgcgaatttcatg
gtgagcacgtggacaggaccaccagccatgaagtcgctcttcacccggatgttctgttgc
aaaagctgcccaaacattgtgaaaaccaataacttcatgaactaccagagctactttctg
cagaagacgatgcctgtcgcaatggccttgctgagagatgtccataatctatgtcctaaa
gaggttttgacgttcattttagatctgatcaagtacaacgacaatagaaaaaacaagttt
tcagacaactattaccgtgcagagctgatagatgcgctagcaaactctgtaactcctgct
gtcagtgtgaacaatgaagcccggacacttgataacttaaatcctgatgttcgcctcatt
cttgaggaaattaccaggttcttaaacatggaaaagctactgcccagctataggcacacc
attacggtcagttgcttgaatgccattcgcatactacagaagaacgggcacgtcccaagt
gatcctgctgtctttaagtcctatgcggaatacgggcactttgtggatatccgaatagca
gctctggaggcagttgttgattacacaaaagttgacagaagttacgaggaactacagtgg
ctgctcagtatggtccagaatgaccctgtgccttatgtcagacataagatattgaacatg
ttgacaaagaaccctccatttaccaagaacatggaatctcctttgtgcaatgaagcgctg
gtggatcagctctggaaacttatgaattcaggtacatcccatgactggaggctgcgctgt
ggggctgtcgacctgtacttcacgctgtttggcctcagcaggccttcctgcttgcctctg
ccagaacttgggctggtccttaacctaaaagaaaagaaagctgtgctgaatcctaccatc
attcctgaggcaggggcaagtggtccggaaccgcctaacaatccaaacaatctgggtcaa
atagttggcttccaaagcactgacgatgatcacattgccaaggaagcagcagttatcccc
ctacctcatcagcaggggttgaagaggaaggccgacacgcctcttgggtccccgctagaa
ccaggccagatacttgagaagaatgaagacagcaaagtcaaactcaaaataagattctca
aactctcaggaggaggaagagattgatatggacacggttcatgacagccaagcatttatc
taccatcatttgaatatgctggaaagaccatcaacgccaggcaaagaacagtcatcgcag
gagctaagcatgctgccgattcctgtgcccacgctgcccggttttacaaaagagtccagc
tcttccaagcacagcgagcaccaccaccaccacaagaagaaaaagaagaagcacaagcac
aaacacaagcacaagcacaagcacgacaccaaagagaaggagaaagagcctttcaccttc
tccaacagccctgcaagcggacgttccattcgctcgccatccctgtcagactga
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