Podarcis raffonei (Aeolian wall lizard): 128417267
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Entry
128417267 CDS
T09310
Symbol
NBN
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03440
Homologous recombination
praf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128417267 (NBN)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128417267 (NBN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
praf03032
]
128417267 (NBN)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128417267 (NBN)
DNA replication proteins [BR:
praf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
128417267 (NBN)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
128417267 (NBN)
BRCA1-C complex
128417267 (NBN)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
128417267
NCBI-ProteinID:
XP_053251667
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All DBs
Position
7:27241116..27261974
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AA seq
754 aa
AA seq
DB search
MWKLSPADESGPGQSYHLLVGVEYVVGRKNCAILIQADQSISRSHAVLSVSHPQVNLSQS
STFPVLTLKDTSKYGTFVNEEKLANGTTRTLRSGDRVTFGVFGSKYRIFYEPLVVCSSCL
AVSQKSALSKNILQLGGHAVNEWKEECTHLVMDSIKLTVKAICALICGRPIVKPEYFDEL
IKAIQAKQLLPTPESFYPPIDELSVKNNKLDLAPSPIRRTIFKGKTFVFLTAKQFAKLSA
AIKLGGGEAKLITEEAEIVSSLVAPDICVIEVGLTNSQGSISDLDRKWMDRITAVFQRKQ
WRTISEAEIGLAVIFSSTKTYCNPQTPLDAGVKPTSAPLVTGPNLSQSQVVDETVMPTIA
AYVADTEMDQLMDTCMEVSGENRKRATTPIREQRKKPYPLDITTVNETPAGTGTVNVGAT
VPRLNARPETNQSSLSPSPSKMSGNRRNKEGDSQQQLNSIKNYFQTVTKKRERDEVEETS
QSKYAKIEKSSLASSDTQPVTSWLWESKAGGSQKGSCTLDQNTNKSCIGGSRKSIAETSP
LENNNNESIVASKKRKELEDSIEDEASLELVFASQELDWEDDIGNHGEGSTQGAKKKRKL
EMKEENSDMETGRLQQEKKQSLPVLNQKQEREESPGSAKNDSNNPDRCANLPSRLLLTEF
RSLVVSQPRKDGRCTAKIDYGHLNNFKKFKKVAYPGAGQLPYIIGGSDLIAHHARKNSEM
EEWLRQEMEEQSRQAKEDSLADDLFRYDPHVKRR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctgagcccagctgacgagtccgggccaggacagtcataccaccttttagtt
ggtgttgagtatgttgtcggacgtaaaaattgtgccattttaattcaagcggatcagtcc
atcagccgaagccatgcagtcctttcagttagtcaccctcaagtgaaccttagtcagtct
tctacatttcctgtgttaactttaaaagacacttctaaatacggtacctttgttaatgaa
gaaaaactagcaaatggtactactagaactttgaggtccggtgacagagtcacttttgga
gtctttggaagcaagtatagaatattctatgagcctttggtagtgtgctcttcgtgctta
gctgtttcacagaaaagtgctttaagtaaaaatattctacagctgggaggccatgcagtg
aatgagtggaaagaagaatgtactcatcttgttatggactcaatcaaacttacagttaag
gcaatatgtgccttgatctgtggtcgaccaattgtgaagccagagtattttgatgaatta
atcaaagcaattcaggcgaaacagctgttaccgacacctgaaagtttttaccctcctatt
gatgagctgagtgttaagaataacaaattagatctggcaccctctcccataagaagaaca
atattcaaaggaaaaacgtttgtgtttctaactgctaagcagtttgcaaagctgagtgca
gcaattaaacttggaggaggagaagcgaaactgataacggaggaagcagagattgtttct
tctttggtagcacctgatatttgtgtcattgaagtagggttgacaaactctcaaggatcc
atttctgacttggacaggaaatggatggatagaatcacagctgtgttccaaaggaagcaa
tggaggacaatatctgaggcagaaattggtctagcagttattttttcatccacaaaaaca
tactgtaatcctcaaactccactagatgcaggtgtaaaacccacatcagcaccacttgtt
acaggaccaaacctttctcaaagtcaagtagtagatgaaacagtgatgcccaccattgca
gcatacgtagctgacacagaaatggaccaactgatggacacatgcatggaagtgtcagga
gagaacagaaagagagcaacaactcctatcagggaacaaaggaaaaaaccttacccactg
gatataactactgttaatgaaactccagcaggaactggcactgtgaatgttggggctaca
gtacccaggttgaatgcaaggcccgagactaaccagagtagcctttcgccctctccctct
aaaatgtcagggaataggagaaataaagagggagattcacagcaacaattgaattcaatt
aaaaactacttccagacagttaccaaaaaaagggaaagggatgaggttgaagaaacatca
cagtctaaatatgcaaagatagagaagtcatcactggcttctagtgatactcagcctgta
acttcttggctgtgggaaagcaaggcaggaggatctcaaaaagggtcatgtaccttggac
cagaacacaaacaagtcctgtataggtggaagtagaaagtctattgcggagactagcccg
ttagaaaataataataatgaaagcattgttgcatcaaaaaagagaaaagaattggaggac
tcaatagaagacgaagcatcgttagaacttgtctttgcaagccaagaactggattgggaa
gacgatataggaaatcatggtgaaggcagtactcaaggtgcaaagaagaaaaggaaattg
gaaatgaaagaagagaattcagatatggagactgggagacttcagcaagaaaagaagcag
tcgcttccagttttaaaccagaaacaagaaagagaagaatcaccaggctctgcaaagaat
gactccaataatcctgatagatgtgcgaatctgcccagcaggctcctgctgactgaattt
agatcattggttgttagtcagccaaggaaagatggtcgttgcactgcaaaaatagattat
ggacatctgaacaactttaaaaagtttaaaaaggtagcttatcctggagcaggacaactt
ccatacattattgggggatcggatctgatagctcatcatgctagaaagaattctgagatg
gaagaatggttgaggcaagaaatggaggaacagagtcgccaagcaaaagaagattcgctt
gcagatgacctcttcagatatgatccccatgtaaaaagaagataa
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