Podarcis raffonei (Aeolian wall lizard): 128417730
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Entry
128417730 CDS
T09310
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128417730 (KDM1B)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128417730 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
SWIRM
Thi4
Pyr_redox_3
HI0933_like
DAO
FAD_binding_3
FAD_oxidored
Pyr_redox
Lycopene_cycl
FAD_binding_2
GIDA
NAD_binding_9
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
KARI_N
VMAP-M5
Attractin
Motif
Other DBs
NCBI-GeneID:
128417730
NCBI-ProteinID:
XP_053252768
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All DBs
Position
7:complement(60228922..60252256)
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AA seq
818 aa
AA seq
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MSTGRVRTKKKTPPVDHSPDNLPLRSSGRQVRRKAAEAAEDDDDASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTSQIAKTYRCGMKLNNSTKVE
GPDHCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRL
VGESNAIKMEHLKSPPTIAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDP
TMYLALRNLILALWYTNCKEALTPQKCTHHIIVRGLVRIRCVRETERILHFMTRKGLINT
GVLSVHPDQPLLPKDFHNKSVIVVGAGPAGLAAARQLQNFGIKVLVLEAKDRIGGRVWDD
KTFKGITVGKGPQIVNGCVNNPVALMCEQLGIKMHKIGEKCDLIQEGGRITDPTIDKRMD
FHFNSILDVVADWRKDKNQHQDIPLGDKIQEIYKVFIQESGIQFSDLEEKVLQFHVSNLE
YACGSNLHEVSARSWDHNEFFAQFAGDHTLLNSGYSTIIEKMAEGLDIRLKVPVRSIDYT
GEEVQVTATDGTLWKAQKVLVAVPLTILQKGAILFNPALSERKMKAINSLGAGVIEKIAL
QFPYRFWDSKIQGADYFGHVPPSSSKRGLFSVFYDMDPQRKCSVLMSVVTGDAVATMKNL
DDKQVLQQCMIVLRELFKEQEVPDPVKYFVTRWNKDPWIQMAYSFVKTGGSGEAYDILAE
DIQGKIFFAGEATNRHFPQTVTGAYLSGVREASKIAAS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgggagggtccgaacaaagaaaaaaacacctcctgttgaccattctcccgat
aatcttcctctgagaagttcagggagacaggtgaggaggaaagctgcagaggcagctgaa
gatgatgatgatgcttcagagaagaagtacagaaaatgtgaaaaggcaggatgtacagca
acatgtcccgtttgctttgccagtgctgctgaaaggtgtgctaaaaatggctacacatca
agatggtatcacctttcctgtggggaacatttctgtaatgaatgttttgatcattactac
cgaagtcataaagatggctacgaaaaatacactgcctggaaaaggatttggaccagtaat
ggaaaaagtgaacccagccctaaagcttttatggctgatcaacagctcccttactgggtt
cagtgtacaaagccagagtgtgggaaatggcggcagctgacaaaggaaatccagcttacc
tcgcaaatagccaaaacataccgctgtggcatgaaactgaacaattccaccaaggtggaa
ggcccagaccattgctccatgcctgaggatctgagagttgctgaagtttcagatcactgg
tggtattcaatgctcatccttccacctttgctgaaggacagtgtggctgctcctttgctg
tctgcatactacccagactgtgtgggcatgagcccctcttgtaccagtactcaccggttg
gttggtgaatccaatgcaataaaaatggagcacttaaagtctccacccactatagctggg
atgaacaagtacttccagcctttctaccagcccaacgaatgtggtaaagcactgtgtgtg
agaccagatgtaatggaactagatgaactctatgagtttccagaatattcacgagacccc
accatgtatctagctctgagaaacctcattttggctctgtggtacacaaactgcaaagaa
gccctaacccctcagaaatgtacgcatcacatcattgttcgaggccttgtgcgcattcgc
tgtgtgcgggagacggagcgaatacttcattttatgaccaggaaaggtctgattaacaca
ggggtcttatcagttcatcctgatcaacctcttctgcccaaagacttccataataaatct
gtcattgtggttggggctggtcctgctggattagcagctgcaagacagcttcagaacttt
ggaattaaggttcttgtgctagaagcgaaggacagaattgggggccgcgtgtgggacgat
aagactttcaaagggatcactgtgggaaaagggccacagatagtgaacggctgtgtcaac
aatccagtagcactaatgtgtgagcaactgggcattaaaatgcataaaattggagagaag
tgtgatctgatccaggaaggtggaaggataactgaccccactatagacaagcgcatggac
ttccatttcaattctatccttgatgttgtagcagactggagaaaagacaaaaatcagcat
caggatattcctcttggagataaaatccaggagatctataaagtttttattcaggaatct
ggtattcagttcagtgatctcgaggaaaaagttcttcagttccatgtcagtaaccttgaa
tacgcctgtggcagcaacctccatgaggtttctgcacgttcctgggatcacaatgaattt
tttgctcagtttgctggagatcacacgctcttaaactcgggatactcaacaataattgaa
aaaatggctgaaggtctggacattcggttaaaggttccagttcgcagtatagactatacg
ggggaagaagtccaagtgactgcaaccgatggaactctctggaaagcacaaaaggtttta
gttgctgtacctctgactattcttcaaaaaggcgccattctgtttaacccagccttgtca
gagagaaaaatgaaagctatcaatagtttgggagctggagtcattgagaagattgcacta
cagtttccatatagattctgggacagcaagattcaaggagctgattactttggccatgtt
ccacctagttccagcaaacgtggactcttcagtgttttctatgacatggatccacagcgt
aaatgcagtgttctaatgtctgttgttacgggtgatgctgtggcaactatgaagaattta
gatgacaagcaagtgctgcaacaatgcatgattgtgctccgtgagctgtttaaggaacag
gaagtgccagacccagtcaagtacttcgttacacgatggaacaaagatccttggatccaa
atggcgtatagttttgtgaagacagggggcagcggtgaagcttatgacatcctagcagaa
gacatacaaggaaaaatattttttgctggagaggccacaaacagacatttcccacagaca
gttactggagcttacttgagcggtgttcgagaagcaagcaaaatagcagcatcttga
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