Podarcis raffonei (Aeolian wall lizard): 128417867
Help
Entry
128417867 CDS
T09310
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128417867 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128417867 (DROSHA)
03009 Ribosome biogenesis [BR:
praf03009
]
128417867 (DROSHA)
03036 Chromosome and associated proteins [BR:
praf03036
]
128417867 (DROSHA)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
128417867 (DROSHA)
Messenger RNA biogenesis [BR:
praf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
128417867 (DROSHA)
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
90S particles
RNase
128417867 (DROSHA)
Prokaryotic type
rRNA processing factors
128417867 (DROSHA)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
128417867 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
128417867
NCBI-ProteinID:
XP_053253062
LinkDB
All DBs
Position
7:68843152..68926464
Genome browser
AA seq
1340 aa
AA seq
DB search
MSFHSGRGGCPRSRGGATARTSTPTFRPQNLRQLHPQQPSPQYQYDQPTVTTAAYASPPT
TTSYMPSRPDFVPYPPPMPPSPQNTISQCPLRSPFAGHQVKQSFPLPPCFPPTPPPAPNT
GNPSVSTGAAGQNAFPYMMPPPSVPHPLPPPIMPQPINYQPMYSPSYSQQSFPPPNFNSY
PHNANSYQGGGANNVSSGSSNNNSSGNFRNPGQYPIEKSQPERRSPERSKHYEEHRHRDH
GHGERHRSTNHGDRRDRGRSPDRRRQESSRHRSDYVRGRTPPRHRSYEWYRERQRERHRH
RDSRRSPSTERSYRKDHKRTGSQSPGQDRKRTRWEDDRDRWSENTSREKNYTSIKDKEPD
EAVVEKNEEDDEDLLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSRLRDLYEKFEEELG
KRQAKAKAARPPWEPPKTKLDEDVGSSSDSECDSDDDSCSSSSDSEVFDVIAEIKRKKAH
PDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGKLFHY
RITVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEE
MIPENFCVRGLELFSSYLFKDILELYDWNLTGPSLENNDASCPRFHFMPRFVRFLPDGGK
EVLSMHQILLYLLRCNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRI
DQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQAD
KQKLVQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQ
CLMHLDKLIGYTFKDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHH
MHMRKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEG
GLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLE
GSLEEAKQLFGRLLFNGKDLREVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAI
GVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHL
TLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDL
EYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSH
ARTYTVAVYFKGERIGCGKGPSIQQAEMCAAMDALEKYNFPQMAHQKRFIERKYRQELKE
MRWEREHQERELEEADDIRK
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccattccgggcgagggggctgcccccgatcccgaggaggagccacggcgcga
acctcaactccgactttccgcccccagaatttgaggcagctccaccctcagcagccttca
cctcagtatcagtacgaccagccgacggtgaccaccgcggcttacgcaagccctcccacc
accacaagctacatgccttccaggcctgatttcgtcccgtacccgccgcccatgccccca
tcgccgcagaacaccatctcccagtgtcccctgaggtcgcctttcgcgggccaccaggtc
aaacagagcttccctctccccccttgctttccgccgactccgccccccgcccccaatacc
ggaaacccttccgtttcgaccggtgcggcgggacagaacgcgtttccttacatgatgcct
cctccgtcggttccacatcctttgccgcctccgatcatgcctcagccgattaattaccag
cctatgtactccccttcctactcgcagcagtccttcccccctccaaatttcaacagctac
ccacacaatgcaaactcttaccagggtggcggcgccaacaacgtcagcagcggcagcagc
aacaacaacagcagcggcaatttccggaaccctggtcagtatccgatcgagaagtcccag
cctgaacggaggtctccggagcgcagtaaacactatgaggagcatcgccaccgggaccac
ggccacggggagaggcaccgctccactaatcacggcgatcggcgggatcgagggaggagc
cctgatcggcggcggcaagaaagcagtcggcaccgctcagattacgtcagggggcggacg
cctccccgtcacagaagttatgaatggtacagggaacgacaacgagaaagacacaggcac
cgcgacagccggcgatcaccatccactgagagatcttacagaaaggatcacaagaggaca
ggaagtcagtctcccggtcaagaccggaagagaactcgctgggaagacgaccgggatagg
tggtcagaaaacaccagcagggagaagaactatacttccatcaaagacaaagagccagat
gaggccgtcgtcgaaaagaatgaggaagatgacgaggacctgctgaagcctgtgtgggtc
cgctgtacccactcggaaagctactactcaaacgaccccatggatcaagtgggcgattcc
actgtcgtcggaacgagccggctccgagatttatatgagaagtttgaggaagagctgggc
aagcggcaagccaaagccaaagcggccaggcccccctgggagccccccaagaccaaactg
gatgaggatgtcgggagttccagcgactctgagtgcgactcggatgatgacagctgctcc
agcagttcggattcggaggtgtttgacgtcatcgctgaaattaagcggaagaaggctcac
ccagaccggctgcacgaggagctgtggtacaacgaccccggacagatgaacgacggacct
ctgtgcaaatgcagtgcgaaagccagacgaacgggaataagacatggaatctatcccggg
gaagagcctattaagccctgccgacccatgaccaacaatgccggaaaattattccactac
cgcattacagtgtcaccacctacaaactttttaacagacaggccaactgtgatcgagtac
gatgaccacgagtacatcttcgaaggcttttccatgtttgcccatgctcccctcaccaat
attcctctgtgcaaagtcatccgatttaacatcgattatacaattcatttcattgaggag
atgatacccgaaaatttttgcgtacgagggctggagctgttctcttcctatttgtttaaa
gatatcctggaactttatgactggaatcttactggtccttcgttagaaaacaacgacgct
tcctgcccccggtttcatttcatgcctcgttttgtcaggtttcttccagatggagggaaa
gaagtgctgtccatgcaccagattctgctgtatttgttacgctgcaataagccgctggtg
ccagaagaggagattgccaatatgctacaatgggaggagctggagtggcagaaatatgcc
gaggaatgcaaggggatgatcgtcaccagccctggcatgaagcccagctcggttcgcatt
gatcaattggatcgtgagcagttcaaccctgatgtgattactttcccaatcattgtccac
tttggaatacgacctgctcaactcagttatgctggagacccacaataccaaaaactctgg
aagagttatgtgaaattgcgccacctgctggctaacagccccaaagtgaaacaagcggat
aagcagaaacttgtgcaaagagaagaagcacttcagaaaattaggcagaaaaacaccatg
cgtcgtgaggtgaccgtcgagctgagcagccaaggcttctggaaaacgggcatccgctcc
gatgtctgtcagcatgccatgatgcttccagttctgactcatcatatccgctaccatcaa
tgtctgatgcatctggataaactgataggctacacttttaaagatcgctgcttattgcag
ctggccatgactcacccaagtcatcacctaaacttcgggatgaatccagaccatgccaga
aattctttgtccaactgcggcatccggcagcccaaatatggagataggaaagtccaccat
atgcatatgaggaaaaaaggtataaacaccttgatcaatatcatgtcacgtcttgggcaa
gatgatccaaccccttccaggatcaaccacaacgagcgcttggaatttttgggagatgcc
gtggttgaatttttaactagtgttcatttatactacctgtttccaagtctagaggaaggg
ggcttagccacgtaccgtactgccatcgttcagaaccaacatcttgccatgctggccaag
aagctggagctggatcgatttatgctttatgctcacgggcccgatctttgtcgagaatca
gatctgcgtcatgcaatggccaactgctttgaagcgttgataggggcggtttacttggag
ggcagcctggaggaagccaagcagctctttggacgcttgcttttcaacggcaaggacctg
cgggaagtatggcttaattatccgctgcaccctctacaactgcaagagtccaatactgac
cgacagctgattgagacatctcctgtgctccagaaattgaccgagttcgaggaagccatc
ggagtaattttcactcatgttcggcttttggcccgggctttcactttgagaactgtcgga
tttaaccacctaaccctgggccacaatcagaggatggaattcttgggagattccataatg
cagctggtggcgacggagtatttattcatacatttcccggatcatcatgaaggccaccta
acgctgttgcggagctccctggtcaacaacagaacgcaggccaaagtcgccgaagaactg
ggcatgcaggagtttgccattacaaacgacaaaaccaagcgccccgtggccttacggacg
aagacgctggcggatcttttggaatcctttatcgctgctctgtacatagacaaggacttg
gaatatgtccacaccttcatgaatgtctgcttcttcccacgactaaaggaattcatttta
aaccaggactggaacgatccaaaatcccagctccagcaatgctgcttaactctccgaaca
gaagggaaggagccagacatccctctctataagactctgcaaacagtcggaccctctcat
gcgaggacatacactgtagctgtttattttaaaggcgaaagaataggatgcggtaaagga
ccaagcattcagcaagcagagatgtgcgcagcaatggatgccttggaaaaatataacttt
cctcagatggcccatcagaaacgattcattgagcggaagtacaggcaagagcttaaagaa
atgaggtgggaaagagagcatcaggaaagagagctggaggaagcggacgacatccggaaa
taa
DBGET
integrated database retrieval system
