Podarcis raffonei (Aeolian wall lizard): 128417870
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Entry
128417870 CDS
T09310
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03015
mRNA surveillance pathway
praf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128417870 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128417870 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128417870 (CPSF7)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
128417870 (CPSF7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
128417870
NCBI-ProteinID:
XP_053253070
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Position
1:80515425..80536151
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AA seq
461 aa
AA seq
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MSEGVDLIDIYADEEFNQDSEFSNADQMDLYDDVLAASSQPSESCPSSSEPPPENRQEQS
PKPNSKSPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLTRIIRSVGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKILNGDKVEVKLATRQNLAQFEAQARKRVPPRA
HSRDSSDSVDGRATPTENAVPPPPRIEKPPVLPFFNRPPSALPLMGLPPPPIPPPPLSSS
FGVPPPPPGIHYQHLMPPPPRLPPHLTVPPPGAVPPALHLNPAFFPPPNAAMGPPPDTYN
KTSAAYNHSSRELGPLPPPVSEAEFEDIMNRNRAISSSAISKAVSGASAGDYSDAIETLL
TAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSMGTSSSSSRKRHRSRDRSPSRSR
ESSRRHRDVVHNEDRHEDYFQERSREHERHRDRDRERDRHH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaggagtggacctcatcgacatctacgccgacgaagagtttaaccaggactct
gagtttagtaatgctgaccagatggatctatatgacgacgtgctagctgccagctcacaa
ccttctgaaagttgccctagcagctccgagccaccacccgaaaaccgtcaagagcagtct
cctaagccaaacagcaaatcacctgctatcctgtatacctacagtgggctgcgtaataag
agggctgctgtttatgtaggcagcttctcttggtggacaactgaccagcagctgacccga
ataatccgttctgtgggtgtttatgatgtggtggaactcaagtttgctgagaacagagcc
aatggccagtccaaagggtacgcagaagtggtggttgcctctgagaactccgtccacaaa
cttctggagctgctaccagggaagattctcaatggagataaagtggaagtgaagttggct
acccggcagaaccttgcacagtttgaggctcaggctcgaaaaagggtgcctccgagggct
cactcaagggattcctccgactcagtagatggccgagccactccgacagagaatgctgtg
ccgccgccgccacgcattgagaagcctcctgtgttgcctttcttcaaccgccctccttct
gcgcttcctctcatggggctgccacctccacccataccaccccctcctctttcctcaagc
tttggggttccccctccccctccaggaatccactaccaacacctcatgccccctccccct
cgacttcctccacacctcactgtgccacctcctggggccgtgccacctgcgctgcacctc
aacccagccttctttcccccacccaatgcagcaatggggcccccgccagacacctataac
aagacctctgcagcatacaaccacagcagccgggaactgggcccattgccgccacctgtc
agtgaagctgaatttgaagatatcatgaacaggaatcgagcaatttccagcagtgccatt
tccaaagctgtgtctggtgccagtgcaggggactacagcgatgccattgagaccctgctc
acagccattgctgtgattaaacagtcacgtgtcgcaaatgatgagcggtgtagagtcctt
atctcttcactcaaggattgtcttcatggcattgaagccaagtcttacagcatgggcacc
agcagcagctcctccagaaagcggcaccggtctcgggatagatcacccagtcggtctcgt
gagagcagtaggaggcaccgagacgtcgtccataatgaagatcggcatgaggactatttc
caggaaagaagccgggagcatgagcgacatagagacagggacagagaaagagaccgacat
cactga
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