Podarcis raffonei (Aeolian wall lizard): 128418000 Help Entry 128418000         CDS       T09310                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism praf  Podarcis raffonei (Aeolian wall lizard) Pathway praf03040   Spliceosome praf04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:praf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     128418000 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     128418000 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:praf03041]     128418000 (PRPF19)    04121 Ubiquitin system [BR:praf04121]     128418000 (PRPF19)    03400 DNA repair and recombination proteins [BR:praf03400]     128418000 (PRPF19) Enzymes [BR:praf01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      128418000 (PRPF19) Spliceosome [BR:praf03041]  Complex B   Other components    Prp19 complex     128418000 (PRPF19)  Complex C    Prp19-CDC5 complex     128418000 (PRPF19) Ubiquitin system [BR:praf04121]  Ubiquitin ligases (E3)   U-box type E3    128418000 (PRPF19) DNA repair and recombination proteins [BR:praf03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     128418000 (PRPF19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Prp19 WD40_CDC20-Fz WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 U-box Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_SPT8 PROPPIN eIF2A Beta-prop_Nup120_160 Cytochrom_D1 Ge1_WD40 zf-Nse Beta-prop_DCAF12 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 DUF1830 ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  128418000 NCBI-ProteinID:  XP_053253292 LinkDB All DBs Position 1:80817527..80830740 Genome browser AA seq 504 aa AA seqDB search MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIVPQAVPSSQPNAVGAGEPMDLGELAGMTPEIIQKLQDKA TVLTTERKKRGKTVPEELVKPEELSRYRQVASHVGLHSASIPGILALDLCPSDTNKILTG GADKNVVVFDKTSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPSVSCVQ VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQVYICKQWTEVLHFTEHSGLTTG VAFGHHAKFLASTGMDRSLKFYSV NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtccctcatctgctccatttcaaatgaggtgcctgagcatccctgtgtgtctcctgtc tcaaaccatgtctatgagagaaggctgattgaaaagtatattgcagagaatgggactgat ccagtgaacaaccagccactgtctgaagagcaactaatagatatcaaagttgcccaccca attcggccaaagccaccatctgctactagcattccagccattctaaaggcacttcaagat gaatgggatgctgtcatgctgcacagtttcacgctacgccagcagctgcaaactacacgt caggaattgtcccatgcactataccagcatgatgctgcctgccgtgtcattgcccgtctc accaaagaggtcactgctgcgagagaagctttggcaactctgaaaccccaggctggcctc atcgttccccaggctgtaccttcttcacaacccaacgctgtgggtgctggtgaaccaatg gacttaggagagctggctggaatgaccccagagattatccagaagcttcaagacaaagcc acggtgctgaccacggagcgtaaaaagagagggaagaccgtgccggaggagctggtgaag ccggaagaactcagcaggtaccggcaggtggcttcacatgtgggactgcacagtgccagt attcctggcatccttgctctcgacttgtgtccttctgacaccaacaagatcctcacaggt ggagctgataagaatgttgttgtctttgacaagacctcagagcagatcctggccacactg aaaggtcacaccaagaaggtcaccagtgtagtcttccatccttcccaggaactggtgttc tcggcttcgccagatgctactatccggatctggtcagtccccagtgtttcatgtgtgcag gttgtgcgtgcccatgagagtgccgtgacagggctgagtctccatgccacaggcgattac ctactgagctcctctgatgaccagtattgggctttctccgacatccagactggccgtgtt ctcaccaaggtcacagatgaaacttctggctgtgcactgacctgtgcccagtttcatcct gatgggcttatttttgggacaggaacaatggactctcagattaagatctgggacttgaag gaaaggaccaatgttgcaaacttcccaggacactctggccctattactagcattgccttc tctgagaatgggtactacctggccactgctgctgatgactcctctgtcaaactctgggat ctgcgcaaactgaagaactttaagaccctgcagctggacaacaactttgaggtgaagtcc ctcatatttgaccagagtggcacctatttggccctaggtggcactgatgtccaagtctac atctgtaagcaatggacggaggttctccacttcacagagcatagcggcctgaccacagga gtggcctttgggcatcatgctaagttccttgcttcgacaggcatggacagaagcctgaaa ttctacagtgtgtag

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