Podarcis raffonei (Aeolian wall lizard): 128418022
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Entry
128418022 CDS
T09310
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128418022
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Protocadherins
128418022
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Bact_surface_Ig-like
DUF7350
Motif
Other DBs
NCBI-GeneID:
128418022
NCBI-ProteinID:
XP_053253373
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All DBs
Position
7:complement(87271918..87276459)
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AA seq
897 aa
AA seq
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MGDCFRRKQGLYLFLFLCFPGALCVSSHYSVPEEKKTGSLVANVLQDLKLGTGELFARRA
QLVSKSAKQYFHLDTRSGDLLISEKIDREVLCGQTDPCLLLSQIVLENPLELHSIVVKIE
DVNDNVPRFSTKEFDLEIPENVSPNTHFPLDSAQDEDLGRNSIQNYTLSPNEHFRLDVKS
EEDGNKHVDLVLEKPLDREKDPHFGLTLTAVDGGEPQRTGTVKINIDVLDINDNSPQFTH
SEYKVKLKENSPQGTLVFKVEATDLDFGSNAQITYSFHRMPEKIYNLFHLNEITGEITVS
GQVDFEKETRYDMKIRATDVGGLSGHCKVLVEIEDVNDNVPEVSVISITSPLAEDSPLET
LVALFTVTDQDSGDNGRTICSVETNLPFVLKPTMDNYYQLVVQSSLDREKVSEYNITITA
IDQGSPRLTSTRIINVQISDVNDNPPVFEKSSCEMQIRENNIPGLLIGSVRAADLDTEKN
AKVTYSLLPGKVTDGLVASYISVNSESGNLYVLRSLDYEQIKDFKVTVRATDGGSPPLSS
EVTVRVIVIDENDNAPFFLYPLQNSTSPCNELVPKLVEAGYLVTKVVAVDGDSGQNSWLS
YELLKATDPGLFSLGAQNGEVRTRRALSERDTSKQRLLIVVRDNGLPPQSSTAMLHVLPV
GGFSDPYMKAVEVSKEEHEEDGTLTLYLVICLAAVSFVFLVCIVSFAAIKICRRDPRESF
IAAPPHFPPARPDIPENCGDSQSGSLSRSYHYNVCLTGGSLSSEFRFLRPLIPVFSVGEP
NLNVNQTTPSASQDIPDSLESRKPMEQVREISVFNTNRKNEIVFSFISILFCVEMIHSGL
IENWIWSFVGGGIHLAPAIFLAGSTFLFPTSSFFHPSLIQDNSFTCIVELLCEPFCT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggagactgcttcaggagaaaacaaggtctgtatctttttcttttcctttgttttcct
ggagcattgtgtgtttcaagccattattctgtgcctgaagaaaagaaaactgggtctttg
gtggctaatgtgctgcaggatttgaaattgggaacaggggagctctttgctcgcagagcc
cagctggtgtccaaaagcgctaagcaatatttccaccttgatactcgctctggggatctg
ttgataagtgaaaaaatagaccgagaagttttatgtggccagactgatccttgcttgctt
ctctcacaaattgtgctggaaaacccgttagagctccacagtattgtagtcaagatagaa
gatgtgaatgataatgtccccagattctctacaaaggaatttgatctggaaattcctgaa
aatgtctctccaaatacacatttccccttggactctgcccaagatgaggacctagggaga
aatagcatccaaaactacactctcagtcccaatgaacatttccgcctcgatgttaaaagt
gaagaggatggaaacaagcatgtggatctcgtcctggagaagccactggacagggagaag
gacccacactttggtctgactctcacagctgtggatggaggggagccacaaagaacaggc
acagttaaaataaatattgatgttcttgacatcaatgacaattccccacagtttactcat
tctgaatataaagtaaagttaaaggaaaacagcccacagggtactctggtcttcaaagtg
gaagctacagatttggattttggttcaaatgcacagatcacctactcattccaccggatg
cctgaaaaaatatacaatttgttccacctaaatgaaatcactggggaaatcactgtttca
ggtcaagttgattttgaaaaagaaaccaggtatgacatgaaaattagagcaacagatgta
gggggcctttcagggcactgcaaggttctggtagagattgaggatgtgaatgacaatgtc
cctgaagtgtccgtcatatccatcactagtcctttggcagaggattctcccctagagaca
cttgtggctctctttactgtaacagatcaagactctggtgataatggcagaaccatttgc
tctgtggagacaaatcttccctttgtcttaaaacccacaatggataactattaccagctt
gtcgtccaaagctccctcgacagagagaaagtctcagagtataatatcaccatcacagcc
attgaccaaggctcccccaggctcacttcaacaagaattattaatgttcagatctcagat
gtcaatgacaatcctccagtatttgaaaagtcttcatgtgaaatgcagatacgggaaaac
aatattccaggactgctcattggctcagtccgtgctgctgatctggacaccgagaagaat
gccaaggtcacctactcccttttgcctgggaaggtcactgatggccttgtggcctcttac
atctcagtcaactctgaaagtggaaatctgtatgtcctccgatccctggattatgagcag
atcaaagatttcaaagtgacggtgagggctacagatggagggtctcctcccctcagctca
gaagttactgtccgagtcattgtcatagacgaaaacgacaacgctcccttcttcctctac
cctcttcagaacagcacatccccctgcaatgagctggtccccaagttggtggaggccggc
tacctggtcaccaaggtggtggctgtggatggagattctggccagaactcgtggctttcc
tatgagctgctgaaggccacagaccctggtcttttcagcctaggagcccagaatggggaa
gtgagaaccaggagagccctgagcgagcgagacaccagcaagcagagactcctgatagtg
gtcagggacaacgggctccctccccagagcagcactgcaatgctccacgtccttcctgtg
ggtggcttttcagatccttatatgaaggctgtggaggtcagtaaagaggaacacgaagaa
gatgggaccttgaccttgtatttggtgatctgcctggctgcagtctcctttgtgttcctc
gtttgcattgtttcttttgctgccatcaagatctgcaggagggatcccagggaaagtttt
atcgctgcccctcctcacttcccacctgccagacccgacatcccagagaactgtggcgat
tctcagagcgggtcgctttccaggagttaccactacaatgtgtgcttaaccggtgggtcc
ttgagcagcgagttcaggttcctcaggcccctcattcctgttttttctgtgggggagcca
aacctcaatgtgaaccagaccactccttctgcttcccaagatattcctgattctttggag
agcaggaagccaatggaacaggtgagagagattagtgtttttaatacaaatagaaaaaat
gaaatcgtcttctcatttatctccatattattctgtgttgaaatgattcatagtggcttg
attgaaaattggatttggagttttgtgggagggggaattcacttagcacctgccatcttt
ctagctggttcaacttttctattccctacctcctctttcttccacccatcacttattcaa
gacaattctttcacatgtatcgttgagcttttatgtgagcctttttgcacataa
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