Podarcis raffonei (Aeolian wall lizard): 128418025
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Entry
128418025 CDS
T09310
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128418025
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Protocadherins
128418025
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128418025
NCBI-ProteinID:
XP_053253384
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Position
7:complement(87286456..87289577)
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AA seq
842 aa
AA seq
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MGDSYRKEQGLYFLLFLCLPGALSISLHYSVPEEKKRGSLVANVLEDLKLGTGELSARRA
QLVSKNTKQYFHLDTRSGDLLINDKIDREALCDQINPCLLLSQIVLENPLDLYSIVVKVE
DVNDNFPKFSKNEFDLKIPENVPTNTQFPLESAKDEDLGENNIQNYTLSPNEHFRLRVES
NKDGRIYVDLVLEKPLDREKEPHFGLTLTAVDGGEPQKTGTVRINIDVLDNNDNFPQFSH
NEYKVRLKENSPRGTLVFKVEATDLDFGSNAQITYSFHRVSEKIYNLFHLNEMTGEITIL
GQVDYEKETSYDMNIRATDGGGLSGHCKVLVEIEDVNDNVPEVSVISITGSIQEDSPPDT
VVALFSVTDQDSGDNGRTMCSVETNLPFALKRTMDNYYQLVVQSPLDREKVQEYNITITA
VDQGSPRLTSTRIINVQISDINDNPPVFEKSSCEMQIRENNIPGLLIGSVRAADLDTEKN
AKVTYSLLPGKVTDGLVASYISVNSESGNLYALRSLDYEQIKDFKVTVRATDGGSPPLSS
EVTVRVVIIDENDNAPFFLYPLQNSTSPCNELVPKSVEAGYLVTKVVAVDGDSGQNSWLS
YELLKATDPGLFSLGAQNGEVRTRRALSERDTSKQRLLIVVRDNGLPPQSSTAMLHVLPV
GGFSDPYMKAVEVSKEEHEEDGTLTLYLVICLAAVSFVFLVCIVSFAAIKICRRDPRESF
IAAPPHFPPARPDIPENCGDSQSGSLSRSYHYDVCLTGGSLSSEFRFLRPLIPVFSVGEP
NLNVNQTPPSASQDIPDQAGKTESGKEVRKKLLLCLLVLNINLSIPEISKQVMITSGILV
AW
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagctacagaaaggaacaaggtctgtattttttgcttttcctttgccttcct
ggagcactgagtatatcacttcactattctgtgcccgaagaaaagaaaagggggtctttg
gtggctaatgtgctggaggatttgaaactgggaacaggggagctctctgctcgcagagcc
cagctggtttctaagaacactaagcaatattttcatcttgatactcgctctggggatctt
ttgataaatgataaaatagatagagaagctttgtgtgaccagattaatccttgcttactt
ctgtcacaaattgtactggaaaacccattagatctctacagcattgtagtcaaggtagaa
gatgtgaatgataattttccaaaattctcgaaaaatgaatttgatctgaaaattcccgag
aatgttcctacaaatacacaattccccttggaatctgccaaagatgaggacctgggggaa
aataacatccaaaactacactctcagtcccaatgagcatttccggctcagagtagaaagc
aacaaggatggaaggatatatgtggatcttgtcctggagaagccgctggacagggagaag
gagccacactttggattaactctcacggctgtggatggaggggagccacaaaaaacaggc
acagttcgaataaatattgatgttcttgacaataatgacaactttcctcagttttctcac
aatgaatataaagtaaggttaaaagaaaacagcccacggggtactctggtcttcaaagtg
gaagctacagatttggattttggttcaaatgcacagatcacctactcattccaccgggtg
tctgaaaaaatatacaatttatttcatttaaatgaaatgactggggaaatcactatttta
ggtcaagttgattatgaaaaagaaaccagctatgacatgaacatcagggcaacagatgga
gggggtctttcaggtcattgcaaggtcctggtagagattgaggatgtgaatgacaatgtc
cctgaagtgtctgtcatatccatcactggcagcatacaagaagattctcctcctgacaca
gtggtggccctcttcagtgtcacagatcaagactctggtgataatggcagaaccatgtgc
tctgtggagacaaaccttccctttgccttaaaacgcacaatggataactattatcagctt
gtggtccaaagtcccttggacagagagaaggtccaggaatataatatcaccatcacagct
gttgaccaaggctcccccaggctcacttcaacaagaattattaatgttcagatctcagat
atcaatgacaaccctccagtatttgaaaagtcttcatgtgaaatgcagatacgggaaaac
aatattccaggactgctcattggctcagtccgtgctgctgatctggacaccgagaagaat
gccaaggtcacctactcccttttgcctgggaaggtcactgatggccttgtggcctcttac
atctcagtcaactctgaaagcggaaatctgtatgccctccgatccctggattacgagcag
atcaaagacttcaaagtgacggtgagggctacagatggaggatctcctcccctcagctca
gaagttactgtacgagtcgtaatcatagacgaaaacgacaacgctcccttcttcctctac
cctcttcagaacagcacatccccctgcaatgagctggtccccaagtcggtggaggccggc
tacctggtcaccaaggtggtggctgtggatggagattctggccagaactcgtggctttcc
tatgagctgctgaaggccacagaccctggtcttttcagcctaggagcccagaatggggaa
gtgagaaccaggagagccctgagcgagcgagacaccagcaagcagagactcctgatagtg
gtcagggacaacgggctccctccccagagcagcactgcaatgctccacgtccttcctgtg
ggtggcttttcggatccttatatgaaggctgtggaggtcagtaaagaggaacacgaagaa
gatgggaccttgaccttgtatttggtgatctgcctggctgccgtctcctttgtgttcctc
gtttgcattgtttcctttgctgccatcaagatctgcaggagggatcccagggaaagtttt
atcgctgcccctcctcacttcccacctgccagacccgacatcccagagaactgtggcgat
tctcagagcgggtccctttccaggagttaccactatgatgtgtgcttaaccggtgggtcc
ttgagcagcgagttcaggttcctcaggcccctcattcctgttttttctgtgggggagcca
aacctcaatgtgaaccagacccctccttctgcttcccaagatattcctgaccaggcgggg
aaaacagaatcagggaaagaggtaagaaagaagcttttgctttgtttgttggttttaaat
atcaatctcagtataccagaaatatcaaaacaggtcatgatcacttcgggaattcttgtt
gcttggtaa
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