Podarcis raffonei (Aeolian wall lizard): 128418026
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Entry
128418026 CDS
T09310
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128418026
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Protocadherins
128418026
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128418026
NCBI-ProteinID:
XP_053253385
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Position
7:complement(87229146..87236294)
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AA seq
834 aa
AA seq
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MPCISGGEAGRMEMHLKIRQVWSFSLYLCACIAMCESFRYSVAEEEKRGSLVANVLKDLR
MDAKELSARRARLVSKSSKQYFQLDPHSGDVTVKDKIDRESLCGQNEPCILLSEIVLEKP
LQLHRIEVQIEDVNDNSPKFSKNQFLLEVSEQIPTNTRFPLEKAQDSDKGENAVQNYTLS
PNEHFRLNVKSHSDGSKYAELVLEKPLDREVNPHIYLTLSAIDGGIPKRTGTAQLLIDIL
DANDNLPQFPQSEYKVKIMENSPLDTLVAKVEATDKDFGSYAHITYSFSEVPENVLRSFK
LNKHTGELTVVGMTDYEETSSYEMHIKATDGGGLSAYCKVIVDIEDENDNAPEISITSIT
SPLTEDSPPDTVVALFSVTDVDSGDSGRTACTTEVNLPFVLKPTENNYYQLVTQQPLDRE
KVSEYNITITATDRGSPRLTSTRILHVEVSDVNDNPPVFEKQFYEMQLRENNIPGLLIGF
VHAVDLDTAQNAKVTYSLLPGKVNDSPTSSYISINSETGNLYAIRSLDYEEVQDFQVTVR
AVDSGSPPLSSEVPIRVQVVDENDNAPFILYPLQNGTSPSNDLVPRGAETGYLVTKVVAV
DRDSAQNSWLSYQLLKATEPGLFTVGAQNGEVTTLRPVSNRDSFKQNLIVVVRDNGHPPQ
STSATLRILLVDGFSDPYLKSVALPKEETAEEEDPSLTMYLIICLAAISSIFLISVVAFV
VIKLQKREKFIGTYNSGANFPVGPDSQEISADPGAGSLSQAYNYEVCLAGGSLNSEFRFL
RPLFPVFSVEPPNTQLNPRSSNDSEGVPSHAGESQNIIQVRVPFEWFNFKFLSL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcatttcaggaggagaggctgggagaatggaaatgcacctcaagatcaggcaa
gtttggtctttttcactgtatctctgtgcatgcatagcaatgtgtgagtctttccgctat
tcagtggcagaggaggagaaaagggggtctctggtagcgaatgtcctgaaggatttgaga
atggatgcaaaggagctgtctgctcggagagcccggctggtttctaagagctccaagcag
tatttccagctggatcctcattctggggatgtgacagtaaaggataaaatagatcgggag
tccctgtgtggtcagaatgaaccatgtattctactgtctgaaattgtgctggaaaagcca
ttgcagctgcacagaattgaagttcagatagaggacgtgaatgataattcccccaaattc
tctaaaaatcaattccttcttgaagtatctgagcaaattccaacgaatacccgatttcct
ttggaaaaagctcaagactcagacaaaggagaaaatgctgttcagaactacacccttagt
cccaatgaacattttaggctgaatgtgaaaagtcacagtgatggtagcaaatatgcagaa
ctggtgttagagaaaccgctagaccgtgaggtgaatccacacatttatcttactctgtca
gctatcgatggggggatcccaaaaagaactggaacagcacagctgctaatcgatattctg
gatgctaatgataacttgcctcagtttccacaatctgagtacaaagtgaaaataatggaa
aacagcccattggatacattggtcgcaaaagtggaagccactgacaaggattttggttcc
tatgctcacatcacttattccttcagtgaagttccagaaaatgtgttgagatcattcaag
ttaaacaaacacactggggaactcactgttgtagggatgactgactatgaagaaaccagc
agttatgagatgcacatcaaagccacagatggagggggactttcagcttactgcaaagta
attgtggacattgaagatgagaatgacaatgccccagagatatcaatcacttctatcacc
agtccattaactgaggactctcccccagacacagtggtggccctcttcagtgtcacagat
gtggactctggggacagtggcagaactgcctgcaccactgaagtcaacctgccatttgtg
ctcaaacccaccgagaacaactattaccagctggtgacccaacagccactggacagagaa
aaagtcagtgaatataacattactatcacagccacggacaggggctctcccagactcact
tccacaagaatacttcatgttgaagtgtcagatgtcaatgacaaccctccagtgtttgaa
aagcaattctatgaaatgcagttaagagaaaacaatattcctggtcttctgatcggtttc
gtccatgctgttgatctggacacagcgcagaatgccaaagtgacctactcgcttttgcct
gggaaggtcaatgatagccccacatcctcttacatctccatcaactctgaaacggggaac
ctgtatgccatccggtctctggattatgaggaagtacaagatttccaggtgacggtgagg
gctgtggattcaggttcccctccactgagctccgaagttcccatccgcgttcaggtggtg
gatgaaaatgacaatgcccccttcatcctctaccctctccagaatggcacttccccctcg
aatgacctggttccccgaggggcagagactggctacctggtcaccaaggtggtggctgtg
gacagggattctgcgcagaactcttggctttcctaccagctgctgaaggccacagagccg
ggtctgttcacggtgggggcccagaatggagaagtgaccaccctgaggccggtcagcaac
cgagacagcttcaagcagaatctgattgtggtggtccgagacaacggccatcctccccag
tccacctctgccacgctcagaatccttctagtggacggcttctctgacccttatctgaaa
agtgtggctctcccaaaggaggaaacagcggaggaggaagaccccagcctgacgatgtat
ctgatcatctgcttggctgccatctcaagcatctttctcatttctgtggtggcgtttgtt
gtaatcaagttgcagaaacgtgaaaagttcataggaacctacaactctggagccaatttc
ccggtgggaccagattcccaggagatctctgcggatcctggtgctggatctctatcccag
gcttacaactatgaggtgtgcttagctggtgggtctctgaacagtgagttccggtttctc
aggcccctgtttcctgttttctctgtggagcctcctaacactcagctgaatccaaggagt
tccaatgattctgaaggagtccccagtcatgcaggtgaaagtcaaaacattatccaggtg
agagtaccatttgaatggtttaatttcaaatttctctctctctag
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