Podarcis raffonei (Aeolian wall lizard): 128418036
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Entry
128418036 CDS
T09310
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128418036
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Protocadherins
128418036
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128418036
NCBI-ProteinID:
XP_053253393
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Position
7:complement(87247536..87250528)
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AA seq
809 aa
AA seq
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MGDSYRKEQGLYFLLFLCLPGALSILLHYSVPEEKKRGSLVANVLEDLKLGTGELSARRA
QLVSKNTKQYFHLDTKTGNLLINDKIDRETLCGQTDPCLLQSEIVLQNPLKIYSIEIKIE
DVNDNIPKFSKKAFYLEIPENVPPNTHFPLEFAQDEDLGINNIQNYTLSPNEHFMLSMES
NKNGRIYVDLVLDKPLDREKDSHFGLILMAVDGGEPQRTGTVQINIDVLDNNDNFPQFTQ
SEYKARLKENNPKGTLVFKVEATDLDFGSNAQITYSFNRVAEKIYDLFHLNEITGEITLS
GQLDYEKETSYDMSIRATDGGGLSGHCKVLVEIEDVNDNVPEVSVISITSPLAEDSPLET
LVALFTVTDQDSGDNGRTICSVEANLPFMLKSTMNNYYQLVVQSPLDREKVPEYNITITA
VDRGSPRLTSTRMINIQISDVNDNPPVFETSSCEMQIRENNIPGLLIGSVRAADLDTEKN
AKVTYSLLPGKVTDGLVASYISVNSESGNLYALRSLDYEQIKDFKVTVRATDGGSPPLSS
EVTVRVIVIDENDNAPFFLYPLQNSTSPCNELVPKSVEAGYLVTKVVAVDGDSGQNSWLS
YELLKATDPGLFSLGAQNGEVRTRRALSERDTSKQRLLIVVRDNGLPPQSSTAMLHVLPV
GGFSDPYMTAVEVSKEEHEEDGTLTLYLVICLAAVSFVFLVCIVSFAAIKICRRDPRESF
IAAPPHFPPARPDIPENCGDSQSGSLSRSYHYDVCLTGGSLSSEFRFLRPLIPVFSVGEP
NLNVNQTPPSASQYIPDQAGKEESEEKVK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagctacagaaaggaacaaggtctgtattttttgcttttcctttgccttcct
ggagcactgagtatattacttcactattctgtgcctgaagaaaagaaaagggggtctttg
gtggctaatgtgctggaggatttgaaactgggaacaggggaactctctgctcgcagagcc
cagctggtttctaagaacactaagcaatattttcatcttgataccaagactgggaatttg
ttgataaatgataaaatagaccgagaaacgttatgtggccagactgatccttgcttatta
cagtctgaaattgtgttgcaaaatcccttaaaaatctacagtattgaaatcaagatagaa
gatgtgaatgataatattcccaaattctccaaaaaagcattttatctagaaattcctgag
aatgtccctccaaatactcatttccccttggaatttgcccaagatgaggacctggggata
aataacattcaaaactacacactcagtcccaatgaacatttcatgcttagcatggagagc
aacaagaatggaaggatatatgtggatcttgttctggacaagccactggacagggagaag
gactcacactttggattaattctcatggctgtggatggaggggagccacagagaacaggc
acggttcaaataaatattgatgttcttgacaataatgacaactttccccagtttacccag
tctgaatacaaagctaggttaaaagaaaacaacccaaagggtactctggtcttcaaagtg
gaagctacagatttggattttggctcaaatgcacagatcacctactcattcaaccgggta
gcagaaaaaatatatgatctgtttcacctaaatgaaatcacgggggaaatcactctttct
ggtcagcttgattatgaaaaagaaaccagttatgacatgagcattagagcaacagatgga
gggggtctttcaggtcattgcaaggtcctggtagagattgaggatgtgaatgataatgtc
cctgaagtgtccgtcatatccatcactagtcctttggcagaggattctcccctggagaca
cttgttgctctcttcactgtcacagatcaagactccggagacaacggcagaaccatttgc
tctgtggaggcaaaccttccttttatgttaaaatccactatgaataactattaccagctt
gtggtccaaagtcccttggacagagagaaggtcccggaatataatatcaccatcacagcc
gttgaccgaggctccccaaggctcacttcaacaagaatgattaacattcagatctcagat
gtcaatgacaaccctccagtatttgaaacgtcttcatgtgaaatgcagatacgggaaaac
aatattccaggactgctcattggctcagtccgtgctgctgatctggacaccgagaagaat
gccaaggtcacctactcccttttgcctgggaaggtcactgatggccttgtggcctcttac
atctcagtcaactctgaaagcggaaatctgtatgccctccgatccctggattacgagcag
atcaaagatttcaaagtgacagtgagggctacagatggagggtctcctcccctcagctca
gaagttactgtccgagtcattgtcatagacgaaaacgacaacgctcccttcttcctctac
cctcttcagaacagcacatccccctgcaatgagctggtccccaagtcggtggaggccggc
tacctggtcaccaaggtggtggctgtggatggagattctggccagaactcgtggctttcc
tatgagctgctgaaggccacagaccctggtcttttcagcctaggagcccagaatggggaa
gtgagaaccaggagagccctgagcgagcgagacaccagcaagcagagactcctgatagtg
gtcagggacaacgggctccctccccagagcagcactgcaatgctccacgtccttcccgtg
ggtggcttttcggatccttatatgacggctgtggaggtcagtaaagaggaacacgaagaa
gatgggaccttgaccttgtacttggtgatctgcctggctgcagtctcctttgtgttcctc
gtttgcattgtttcctttgctgccatcaagatctgcaggagggatcccagggaaagtttt
atcgctgcccctcctcacttcccacctgccagacccgacatcccagagaactgtggcgat
tctcagagcgggtcactttccaggagttaccactatgatgtgtgcttaaccggtgggtcc
ttgagcagcgagttcaggttcctcaggcccctcattcctgttttttctgtgggggagcca
aacctcaatgtgaaccagacccctccttctgcttcccaatatattcctgaccaggcgggg
aaagaagaatcagaggaaaaggtgaaataa
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