Podarcis raffonei (Aeolian wall lizard): 128418043
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Entry
128418043 CDS
T09310
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128418043
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Protocadherins
128418043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
128418043
NCBI-ProteinID:
XP_053253404
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Position
7:complement(87589659..87600132)
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AA seq
1008 aa
AA seq
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MPSPDGGGGTPRWVRGSGGPRLGPRLAGCAGSCARLELLLLLTSCLALALAPAPAASQLH
YSVPEELEHGAFVANIAEDLGLDVSKLSARRFRIVSRAGSKQHLEVNLENGILFVNEKID
REEVCEASGACLLHLQLVIESPLELYRVEVEVLDINDNAPSFPWQEYVLEVTESALPGAR
FPLESAQDPDVGTNSLRTYRLSPNGFFSLEVQTRSDGSKFAELVLERSLDREQQRSHRVL
LTALDGGIPERSGTARVVVTVLDANDNVPVFDQSSYTVSLPEDAPKGTLVIRLNATDLDE
GTNGEVEYSFSGHAPPRVRELFSVEPRSGQVRLKGQLDYERANLHELYVQAKDRGPSAVA
VHCRVLVHLVDVNDNAPEVTLTSVSTPVLEDAPPGTVIAVISVLDRDSGDNGKVSCEIPP
DVPFQLQSSFHNYYTLVTTDPLDREAVPEYNISITARDRGSPALATRKTLTVHVSDINDN
APRFLQPSYSVYVMENNAPGASICSVSALDPDCKQNSYLSYSIADGQIQGMPVATYVSIN
SDSGHMYALRSLDYEQIRNFQIQVLAQDAGFPPLSSNVTVHVFVLDQNDNAPVIVAPVPR
NGSLAVEVVPRSADPGYLVGKVSAVDADAGQNSRLSYQIVQATDSSLFSVALYTGEIRTI
RAFLEKDAPRHRLLVQVRDNGQPPLSASVSLLLSVVDSVPEVLSDFSEFPLGPESASSTL
TLYLIVSLGSVSFTFLVAIVILTAVKCHKDRLTLQDYGCSLPPCGGGGGGGSCCSCDPSG
PPTDIFKNSNHIHNSQVPSGNKGATNCGEGAAVGGPPGYCYKVCLTPESAKSDFMFLKPY
SPAAPRNNEKVPDNLPPAQGKTPRLANNSLQPSSQVKQPNTDWLPSKQSTLKSSQSLEDV
GGVRRGIQKEHDRLRTLVTPVSELQKAPGASNSIWTPRYAPVYSQHMSPLDYQHNVYIPG
TPTMPANKDGPLFLDQEAKNSFSTFGKRKKMTTYCDIHDNMVINNNLK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcccgatggaggcggcgggactccccgctgggtgaggggttcaggggggccc
cggctcggcccgaggctggcaggctgcgccgggagttgcgcgaggctggagctgttgctc
ctgctaacttcttgcttggctctggctctggctccggcgccagcagcgagccagctgcac
tactcggtgcccgaggaactggagcacggagccttcgtggccaacatcgccgaggatctg
gggctggatgtgtctaagctgtcggccaggcggtttcgcattgtgtcccgggcgggcagc
aagcagcacttggaggtgaacctggagaacgggatcctctttgtcaacgagaagatcgac
cgcgaggaggtgtgcgaggccagcggggcctgcctcctgcacctgcagctggttatcgag
agcccgctggagctgtaccgcgtcgaggtggaggtgctggacatcaacgacaacgcgccc
agcttcccctggcaagagtatgtgctggaggtgacggagtcggcgctgcccggcgcccgc
ttccccctggagagcgcgcaggacccggacgtgggcaccaactccctgcgcacttaccgg
ctcagccccaacggtttcttctcgctggaggtgcagacccgcagcgatggcagcaagttc
gccgagctggtgctggagagaagcctggatcgcgagcagcagcgcagccaccgggtcttg
ctgacagctttggatggcggcatccccgagcgctccggcacggctcgggtcgtggtcacg
gtgctggacgccaacgacaacgtgcccgtcttcgatcaatcctcctacacggtgagtctc
ccggaagacgcgcccaaggggactctggtcatcaggctgaacgccaccgacttggacgag
ggcaccaacggcgaggtggagtactcgttcagcgggcacgctccgccgagggtccgagag
ctcttcagcgtggagccccgcagcgggcaggtgcgcctgaagggtcagctggactatgag
cgagccaacctgcacgagctctacgtgcaggccaaggaccgcggcccctccgccgtcgcg
gtccattgccgggtcttggtgcatctcgtggatgtcaatgacaacgcgccggaggtgacc
ctcacctcggtctccacgcccgtcctggaggacgcgcctcctggcaccgtcatcgccgtg
atcagcgtgctggacagagactccggggacaacggcaaggtgagctgcgagatcccgccg
gacgtgcccttccagctgcagtcctccttccacaactactacaccctggtgaccaccgac
cccctggaccgcgaggctgtgcctgagtacaacatcagcatcacggctcgagatcggggc
agcccagcgctggccaccaggaagacgctgaccgtccatgtgtcggacatcaacgacaac
gcgccgcgcttcctgcagccctcctacagcgtctacgtgatggagaacaacgcgcccggg
gcgtccatttgctcggtcagcgccctggacccggactgcaagcagaactcctacctgtcc
tactccatcgccgacgggcagatccagggcatgcccgtggccacctacgtctccatcaac
tcggacagcgggcacatgtacgcgctgcgctcgctggactacgagcagatccgcaacttc
cagatccaagtgctggcccaggacgccggcttccccccgctcagcagcaatgtcaccgtc
cacgtcttcgtgctggaccagaacgacaacgcgccggtcatcgtggcgcccgtgccccgc
aacggctcgctggccgtggaggtggtgccccgctcggcagacccgggctacctggtgggg
aaggtctccgccgtcgacgcggacgccggccagaactcgcggctctcctaccagattgtg
caggcgacggacagcagcctcttcagcgtggccttgtacaccggcgagatccgcaccatc
cgcgccttcctggagaaggacgcgcccaggcaccgccttctggtgcaggtgcgcgacaac
gggcagccgccgctctcggcctcggtgtcgctgctcctctccgtggtggacagcgtgccc
gaggtgctgtcggacttcagcgagttcccgctggggcccgagtccgcctcttctacgctc
accctctacctgatcgtgtccctgggctccgtctccttcaccttcctggtagccatcgtc
atcctcacggccgtcaagtgccacaaggaccggctcaccctccaggactacggctgctcg
ctcccgccttgcggaggtggcggaggcggcggcagctgctgctcctgcgacccctcgggg
cccccgacggacatcttcaagaactccaaccacatccacaactcccaggtcccctcgggc
aacaaaggggccaccaactgcggggagggcgcggccgtggggggccctcctggctattgc
tacaaggtctgcctcaccccggagtcggccaagagcgacttcatgttcctgaagccctac
agcccggccgctcccaggaacaacgagaaagtcccggacaacttgccaccagctcaggga
aagacgccccgcttggcaaataattctctgcagccctccagccaggtgaaacaacccaat
acagactggttgccatctaagcaatcaacattgaagagttcacagagcctagaggatgta
gggggagttcgtcgaggaatccagaaggagcatgacaggttgcgcactttggtcactcca
gtctctgagctccagaaagcacctggtgcctcaaacagcatctggacacctcggtatgct
cctgtgtactcacagcacatgtctcctctggattaccaacacaacgtctatattccgggg
acccctactatgcctgccaataaggatgggcctctgtttctggatcaggaagccaaaaac
agcttctctacttttggaaagaggaagaaaatgaccacatattgtgatatacatgacaac
atggttattaacaataacttgaaataa
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