Podarcis raffonei (Aeolian wall lizard): 128418097
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Entry
128418097 CDS
T09310
Symbol
PCDH8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128418097 (PCDH8)
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Protocadherins
128418097 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
128418097
NCBI-ProteinID:
XP_053253528
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All DBs
Position
7:complement(91836220..91842208)
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AA seq
1066 aa
AA seq
DB search
MNVRKNGRCPGNLCHPGGLLCIGWLLSSALGKTMRYHTYEEDPPGTVIGTLADELPLKGP
GGGGGERSFRLVKAPGNSSLVQVRERDGQLSLGTERLDREALCGQSEEPCVLAFDVVSLG
WTRSGSGGGSPPSPYRLVHVELEVRDINDHAPRFPQPLIALEVSESAAPGTRLPLDLAHD
LDVGSNGIQSFAVSPNSHFGLEAQSRADGLKCAELVLLTELDREAQAAYRLELVAKDGGS
PARSGTATVSVRVLDANDNAPAFPHGALLTVELPEDAPSGALLLDLDASDPDEGANGELL
YAWGSQVPAEARNLFALDPLSGRLSLRAAVDYELQRAYELDVQASDRGASPLAASCKVVV
RLLDVNDNAPAVAISALSAGSGGAGAGSEPGPLVEGGASPEGAAAAWTVAYVSEAAPAES
LVALVSTSDSDAGANGQVRCALLAAPHEPFALQRAYDASYVVLTTGALDRERVPEYNLTV
VAEDLGSPPAKTVHRLTVRLADENDNAPRFAKARYEVAVLENNPPGAYLAAVLAADPDQG
ANGKVTYRLMDSQVTGASISTYVSVDPATGAIYALRTFNYEILKQLELTVQATDGGSPQL
SSAALVKVRVVDQNDNAPIITHPALINGSLEIGVSRKAAHDSVVAHIKARDADEGVNAEL
SFSFLEDSQQQQPPALDLFAINKKTGEVVLTGSFSEEQLGQVYQLLLTVADNGRPPLSTT
VPISFQVTAALLPASSQDSKAKPNTGEGKAVQWDIPLIVIIVLAGSCTLLLVAIITIATT
CNRRKKEKKGVLEEPLDSSHLEKGQQEGKGGGLISSSPGTRGNGFEVHSFPSKSSFASPE
PSPASEDIPALENIRETASLYDSQSRLRGTNAESYASTPSYSKEPGPPVAIWKGHSFNTI
SGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRC
WSPSCGQANPHSSPHPKTQLSTFCKSTSLPRDSLRRDNYYQAQLPKTVGLQSVYEKVLHR
DYDRAITLLSPPHQGRLPDLQEISVPLYQAPSTRYLGPPPETSQKV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcgcaagaacgggcgctgccccggcaacctttgccaccctggggggctgctt
tgcataggctggctgctctcctctgccctcggcaagacaatgcgataccacacctatgag
gaagaccctcccggcacagtgatcggcactttggccgacgagctgcccctgaagggcccg
ggaggaggcggcggagagcgcagtttccgcctggtgaaggcgccgggcaacagctcgctg
gtgcaggttcgcgagcgggacgggcagctgagcctgggcacagagcggctggaccgcgag
gcgctgtgcgggcagtcggaggagccgtgcgtgctggccttcgacgtggtgagtctgggc
tggacgcgcagcggcagcggcgggggctcgcctccttcgccttaccgcctggtgcacgtg
gagctggaggtgcgggacatcaacgaccacgcgccccgcttcccgcagccgctaatcgcc
ctggaggtgtcggagagcgccgcgccgggcacccgcctgccgcttgacctggcgcacgac
ttggatgtgggctccaacggcatccagagcttcgccgtctcgcccaacagccactttggc
ctggaggcacagagccgcgcagatgggctcaagtgcgccgagttggtgctgctgaccgag
ctggaccgcgaggcgcaggccgcctaccgcctggagctagtggccaaggacggcggcagc
ccggcgcgctcgggcacggccacggtcagcgtgcgggtgctggacgccaatgacaacgca
cccgccttcccacatggcgccctgctgaccgtcgagctgcccgaggacgcgccatccgga
gcgctgctcctcgacctggacgcctcggacccggacgagggcgccaacggggagctgctc
tacgcttggggcagccaggtgcccgccgaggcgcggaacctctttgctctcgacccgctc
tcggggcgcctcagccttcgcgctgccgtcgactatgagctccagcgcgcctacgagctg
gacgtgcaggcaagcgaccgcggcgccagcccgctggcggccagctgcaaggtggtggtg
cgcctccttgacgtcaacgacaacgcgcccgccgtggccatcagcgccctcagcgccggc
agtggcggggcgggcgcggggtccgagccgggaccgctcgtcgaggggggcgcgtccccc
gagggcgccgctgccgcctggacggtggcctacgtgagcgaggcggcgccggccgagagc
ctggtggcgctggtcagcacctcggacagcgacgcgggagccaatggccaggtgcgctgc
gccctgctggccgcgccgcacgagcccttcgccctgcagcgcgcctacgacgccagctac
gtggtgctcaccacgggcgccctggaccgtgagcgcgtgcccgagtacaacctcacggtt
gtggccgaggacctgggctcgccgccggccaagaccgtgcaccgtctcaccgtgcgcttg
gccgacgagaacgacaacgcgcctcgcttcgccaaggcgcgctacgaggtggcggtgctg
gagaacaacccgcctggcgcctacctcgccgccgtcctcgccgccgacccggaccaagga
gccaacggcaaggtcacctatcgcctgatggacagccaagtaacgggcgcctccatttcc
acctatgtttcggtggatccggcgacgggggccatctacgcattgcgcactttcaactac
gaaatcctcaagcagctggagctgaccgtccaagccacggatggcggctcccctcagctc
tccagcgcagccttggtgaaggtgcgggtagtagaccagaacgataatgcgcctatcatt
actcacccagcactcatcaacggctcccttgagatcggggtgtccagaaaagctgcccac
gactcggtggtggcacacatcaaagccagagatgctgatgagggagtcaacgctgagctc
agcttttccttcctagaagattcgcagcaacagcagccaccagccctggacctctttgcc
atcaacaagaaaacaggagaagttgtgctcaccgggagcttctcagaagaacagctgggc
caagtctaccagctgctcctcaccgtggccgacaatggacggcctcccctctccactacc
gtccctatcagtttccaggtgactgctgcgttgcttcccgcaagcagccaggattccaag
gccaagcccaacactggggaagggaaagctgtgcagtgggacatccccttgattgtcatc
atcgtccttgctgggagctgcactttgctgctggtggccatcatcactatcgccaccact
tgcaacaggcgcaagaaggagaagaagggagtcctggaggagccgctggacagctctcac
ctggagaaggggcagcaggaaggcaagggcggtggcctgatctcctccagccctggcacc
cgaggcaatggcttcgaagttcattccttccccagcaaatcttcctttgctagcccggag
ccctccccagccagcgaagacatcccggctttagaaaacatcagagagaccgccagtctc
tatgacagccagagcagactccgggggacgaatgcagagtcttatgcctctacccctagt
tacagcaaagagccaggcccacctgtggccatctggaagggtcattctttcaacaccata
tcaggcagagaagcagagaagttcagcggcaaagacagtggtaaaggcgatagtgatttc
aacgacagtgattctgacatcagtggggacgctcttaaaaaggacctcatcacgcacatg
cagaatgggttgtgggcttgtactgctgaatgcaagatcctgggccactcagatcgatgt
tggagcccttcctgtggccaagccaatcctcactcatccccccacccaaagacccagctg
tccaccttctgcaaaagcacctcactgcccagggattcccttcgccgagataactattat
caggcacaactgcccaagacagtggggctgcagagtgtctatgagaaagtcttgcatagg
gattatgacagagctattacattgctgtcgcctcctcatcaggggaggctgccagacctc
caagagatctcagtacccttataccaagcaccctccactcgatatttaggccctccacct
gagaccagtcagaaggtttaa
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