Podarcis raffonei (Aeolian wall lizard): 128418236
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Entry
128418236 CDS
T09310
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128418236
04121 Ubiquitin system [BR:
praf04121
]
128418236
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128418236
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128418236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
128418236
NCBI-ProteinID:
XP_053253713
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Position
8:complement(5561718..5572983)
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AA seq
743 aa
AA seq
DB search
MEVGVKVKTEMEDVSSKRVSEFLQKCVKLEDSEGDAQPKEEIIEVQTLPILAPSYPQTVQ
EEISMVFNTCAMPANLGPCTRRRREKGSGHDGTSASLYVDRRKSKVWNYYTKLGDAYVEC
NVCKKQLSFHNSTTTMREHLVRKHSIRDTLLSQLKDDQVPDPDYVAQETAIKRARQLTPE
NSSQYHAVSCAEPRTDVILELVLEMIFRDLHPLSVVKDKGFGLLIGYLEPSFILPSPMQL
SSMLWHRYNVVKQHLEHYLQTAQSIVICAEFWLSQPNQTYLTIMTNFIDGEWRRARCILE
TQQVHEDKGESNLGDRLYSVLTDFGLSNKSVFCVMHDSLQDLGANSSQLKCVYGWTSLCC
AAHLLHLCVKAGLEVEQVQEALSAARSIVCYFQQDAKATCSLNSKLEAINKTKLKLVMDT
GARWITTIEMCECLLDLKWAIMSVLEEHPKGTTVVQNLADHQWKLLQDLVPVMRTLKIAT
SFLREEQNFSISSLMPCIHGIVTAIGQQSEEASGVIKTVVSNIRSELTQRWGILDEEKLL
ESPAVVASFLDPRFKEMRFLSPSLRSELHKKIKSMLSQFFNHQSPLSNQFWVPNADYKAE
VGETACQISAHKERGPSGQSQSMYDILLGKDPTESMPEIHQQLENYIVEPLCKRSTNPLD
WWKNNEHRFPSVARLARQYLAIPATVVPPEQAFAASESALEHRRGVLAPENLDQILFLHQ
NFDFLESMRNGNENLSKAVHNQY
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaggtgtcaaagtgaagaccgaaatggaagatgtgagctccaaaagggtcagc
gaattcttgcagaaatgcgtcaagctagaggatagcgaaggggacgcccagcccaaggag
gagatcatagaagtgcaaaccctccctatccttgcgccatcctaccctcagacagttcaa
gaggaaatatccatggtcttcaatacctgcgcgatgccagccaacctgggtccgtgcacc
aggcggaggcgcgagaaaggcagtggccacgacgggacaagcgcctccctctatgtcgac
cgccgcaaatccaaggtgtggaactactacacgaagctgggggatgcctacgtggagtgc
aacgtctgcaagaagcagctctccttccacaacagcaccacgaccatgagggagcacctc
gtgaggaagcacagcatccgtgacaccctgctctctcagctgaaggacgaccaggttccc
gaccccgactacgtggcccaggagacggcgataaaaagggcccgccagctcacgcccgaa
aacagcagccagtaccacgccgtctcctgcgcggaacccaggacggacgtgattctggag
ctggtgctggaaatgatcttccgggacctgcaccctctctcggtggtgaaggacaaaggc
tttggccttctgattggctatctagaacctagctttattctcccgtcccccatgcagctc
tctagcatgttgtggcaccggtacaacgtggtcaagcaacacctagaacattacctgcaa
acggcccagtcgattgtgatctgcgccgagttctggctgtcccagcccaaccagacctac
ttgaccatcatgactaacttcatcgacggggagtggaggcgggcgcggtgtatcttggag
acccagcaggtgcacgaggataaaggggagagtaacttgggagaccggctgtactcggtc
ctgacggactttgggctgtctaacaagtctgtcttctgcgtgatgcacgacagcctgcag
gatttgggggccaactcctcgcaactcaagtgcgtctacggctggaccagcctttgctgt
gctgcccacctgctgcacctgtgcgtcaaggcgggtctcgaagtggagcaggtgcaagag
gccctgagcgcggcgcgcagcatcgtctgctacttccagcaggatgcgaaggccacctgc
tcgctcaacagcaagctggaagccatcaacaagacgaagctgaagttggtgatggacacg
ggggcacggtggataaccaccattgagatgtgtgagtgcctgctggacctcaagtgggct
atcatgtccgtgttggaggagcaccccaagggaacaacggtggtccagaacttggccgac
caccagtggaagctcttgcaggacctggtgcccgtcatgagaacgctcaagatcgccacg
tccttcttgcgggaggagcagaacttctccatctcctccttgatgccctgcatccacggc
attgtcacagccatcgggcagcagtcggaagaagcgagcggcgtcatcaagacggtggtg
agcaacatcaggtcggagctcacccagcgctggggcatcttggatgaggagaagttgctg
gagagcccagccgtggtggcctcattcctggacccacgtttcaaggaaatgaggttcttg
agccccagcctgaggagcgagctgcacaaaaagatcaagagcatgctctcccagttcttc
aaccaccagtccccgctgtccaaccagttctgggtgccgaacgccgactacaaagcagag
gttggtgaaacggcctgccagatctctgcccataaagagagaggcccgagcgggcagtct
cagagtatgtacgacatccttttggggaaggaccccacggagagtatgcctgagatccat
cagcagctggaaaactacatcgtggagcctctctgcaagcgcagcaccaaccccttggac
tggtggaagaacaatgagcaccgcttcccctccgtagccaggttagcccggcaatacctg
gccatcccggcaacagtcgtgccaccagaacaggcctttgctgccagtgaaagcgccctg
gagcaccggagaggtgtgcttgctcccgagaacctggaccaaatcctcttcttgcaccag
aatttcgattttttagaatctatgagaaatggcaatgagaatctgagtaaggcggttcac
aaccagtactga
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