Podarcis raffonei (Aeolian wall lizard): 128418294
Help
Entry
128418294 CDS
T09310
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128418294 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128418294 (PATL1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128418294 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
128418294 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
128418294
NCBI-ProteinID:
XP_053253800
LinkDB
All DBs
Position
1:81502008..81520933
Genome browser
AA seq
765 aa
AA seq
DB search
MFRYQSLEDCPLDEDEEGFHNLAEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEEKP
APGGEQVDSGVADEMDLLGDHEENLAERLSKMVIDNELEDPAIMQAVQTRPPVQQQGGLN
SSIWDGPSVLRRIRGPLLNQEVPSVSVLEYALPQRPPQAREEEQDLSERALPRRSSSPVI
GSPPVRAVPIGTPPKQPTMPNFNQQILCPKPVHIRVPIQQRYPSPFSERMSPNQLCNMTN
SSLLGHPFPPNVTPVLTHLQRAQLLGGAQAGRLSPSQFARVSGLVSNPLASMNPKLLQGR
VGQMMPPASGFHAYFGAPPAPSSQHHSPCPGAHLQNLRPQPQMFRPDTTHLHPQHRRLLH
QRQQQNRNQHRSLNGSAGDRGSHRNSHQEQIRKDPYANLMLQREKDWVSKIQMMQLQSTD
PYLDDFYYQNYFQKLEKLSAAEEMHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKL
TVSSVNNPRKMIDAVVTLRGEEDETKEKQVRDKRRQTLFIIEKTYSLLLDVEDYERRYLL
SLEGDRLALMEERKQKICDMYDNLKGKTPNQERLCDDAFVQIMCIRKGKRLVARILPFLS
TEQAADILMATARNLPFLIKKDAQDEVLPCLLRPFSLVLYHLPLRTVASILQQLMNLPQS
MTTTASANLHLTNVLQNKFGLSLLYLVLSRGEELQSSDSTTELLQDNQWTELMFMATREL
LRIPQAALAKPVSTPSNLLSLFSRYVDQQKLNVLETKLQLIQGIR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctaccagtcccttgaggactgccctctggatgaggatgaagaaggctttcat
aacttggctgaggaagatgaagatatcgaccagtttaatgatgacacatttggagctggt
gcagttgatgatgactggcaagaagctcatgaaaggttggcagagctggaagagaagcct
gcaccaggaggagagcaagtggattcgggagttgccgatgagatggacctgctgggggac
cacgaagagaacctggcagagaggctcagcaagatggtgattgacaatgagttggaagat
ccagccatcatgcaggctgtgcaaactcggcctcctgtccagcaacaaggtgggctcaac
tcgagcatctgggatgggccttcggttctcaggcgcatcaggggaccgcttcttaatcag
gaggtcccctctgtgtcagtgctggaatatgccctaccacaaagacctccgcaggcccga
gaagaggagcaggacctttcggagcgggcgctgcccaggcggtcatcctcgccagttatt
ggcagccctcctgtccgtgctgttcctattgggacgccacctaagcagcccaccatgccc
aactttaaccagcagatcctatgtccaaagcctgttcacattagagtccccattcagcag
cgttacccaagccccttcagtgagagaatgtctccaaaccagctctgcaatatgacgaac
tcctccctcctgggccacccattccctcccaatgttactcctgttctcacccaccttcaa
agagcacagctgctaggaggagcgcaggcagggaggctgtctcccagccagtttgcacgt
gtctctggacttgtcagcaaccctcttgcgtccatgaaccccaaactactccagggccga
gttgggcagatgatgcctccagctagtggatttcatgcctactttggggcaccgcctgcc
ccttcatcgcagcaccattccccgtgtcctggagcccacctgcagaatttaaggcctcag
ccgcagatgttccggccagatacaacccaccttcacccacagcaccggcgactcttgcac
cagaggcagcagcagaacaggaatcagcaccggagcctaaatgggtcagcaggggacaga
gggagccaccggaatagccaccaggagcagatcaggaaggacccttacgccaatctcatg
ctgcagcgggaaaaggactgggtgtccaagatccagatgatgcaactgcaaagcactgat
ccatacctggatgacttctactatcagaactattttcagaagctggaaaaactatctgca
gctgaggaaatgcatggtgatggtcccaaaaaagagcgcaccaaactaatcaccccacaa
gttgccaagttagagcatgcctacaagccagtgcagttcgaaggctcactggggaagctc
acagtctccagtgtgaataacccccgcaagatgattgatgctgttgtgacgttacgaggg
gaagaagatgagacaaaggagaagcaggttcgagataaaaggcgtcagactctcttcatt
attgagaagacatacagcctcctcctggatgtagaagactatgagaggcgctaccttttg
agcctggagggcgacaggctggctttgatggaggagaggaagcagaagatctgtgacatg
tatgacaacctgaaggggaaaacgcccaaccaggaaaggctgtgtgatgatgcttttgtg
cagatcatgtgtattcggaaaggaaaacgtctggttgcccggatcctacctttcttgtcc
actgagcaagccgctgatatacttatggccacagccaggaacttgccattcctaattaag
aaggatgctcaggatgaggtgctaccctgcctattgaggcccttttcccttgttctttat
catcttccgctgcgaactgtcgccagcatcctgcagcagctaatgaacctacctcagagc
atgacgacgacagcatcggccaacctgcacctcacaaatgtgctccagaacaagtttggc
ctctctttgctgtacttggtcttgagccgtggggaggaactgcagagttcagattctact
acagagctcttgcaagacaaccagtggacggaactgatgttcatggcaaccagagagctt
ctccggatccctcaggcagccttggccaagccagtgtccaccccctctaatctcctgtct
ctcttctctcgctatgttgatcagcagaaactaaatgtgctagagacaaagttgcagtta
attcaaggaatacgatag
DBGET
integrated database retrieval system
