Podarcis raffonei (Aeolian wall lizard): 128418347
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Entry
128418347 CDS
T09310
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128418347 (CIC)
Transcription factors [BR:
praf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128418347 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
128418347
NCBI-ProteinID:
XP_053253899
LinkDB
All DBs
Position
8:11622299..11672345
Genome browser
AA seq
2511 aa
AA seq
DB search
MKPARKAAGSSSSSSSSSSSSSSRSPPSTRAAKAQKRKATEEGPKPEEEAGEESLDQAPP
FPGARCLQPQMDPGLQELAGAPEDPYKLPEGDRDPGTEACGAEASLNRKTATFKSRAPCR
KCPGGDESNGSEGAAGPAEDEPRRCPSSSTDTASEHSADENDKGAGDTWATASSDYDLRQ
LRSQRVLARREGLFQPAVVKQIRRGQDLGVQFVGDRVTAYYEGALGSGAVDVVLDATPPP
GALAVGTLVCACADPEETAYREGTVVEVSAKPASYKVRFACPIVLPGPAAARKDSAWVTR
SALRLLRPPWSCKAALEDSKPPEKSPPLPEEEKVALALPCPDPKQPEDAEVSKISACVRA
EEKSVVVPPQILSPPKSPAFPRLPEQPSPLLSPDASGSRSSSVMSVDKCSTPGSSRSRTP
LTAAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEME
SLSEGRASGLREGSAEFDWDDTSRDSEASSARGDSRPRLVPPADLSRFEFDECEAAVMLV
SLGSSRSGTPSFSPVSNQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRAAARSRHVS
ASTPKGVGGTVLSPEMLHHAASRERHHSGITFQTNLTFTVPMSPSKRKAGDSHHSSTGSA
ADFHKNESLDSGVESVSHTPTPSTPAGFRAVSPAGAGPFSSRSQQASPLLLVPPPAGLTS
DPSPTVRRVPAVQRDSPVIVRNPDVPLPSKFTEKPLEGRVGSPRAGKAGSKEHLPGKGQL
QMPVPINVGRTLPSSQPCVVSASEQAPPIFSVSSPFQPVAFHPSPAALLPVIVPGEYTSH
PTPKKEIIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDSSVQPTEGQQPVSHPSTS
NQNKEPPESAAVAHELPAVSSGAESGRPNTSHPDSPTPVSQPSAATPGGSGGPAQQEDDV
PGHSRLDSETESDHDDAFLSVVSSEMQLPLLPGKRRTQSLSALPKDRDSSSEKDGRSPNK
REKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAF
QVKEAHFKAHPDWKWCNKDRKKSSSDVKPSGPGGCSKETRERSMSETGTAAVPGGPSEMQ
VLLGPEGKAGMVGSGHSHGERILPSAGPGAQRPRAFSHSGVHGMESDRDSQVLQELTQMC
SGQSLYVSGKGQFGGLGPSGSPFATPGEGPRHSLHLHASRASRSQRTTSEDMTSDEERMV
ICEEEGDDDVIAEDGFNPADVDLKCKERVTDSDSEGSLGDESDNKDFGRKLFSPVIRSAA
LPPSSGAFAPCRPPPPLDLEPPPPPHSLDQQPPPKTYGSFQLAPSTFKAQDSRGGLRPHN
TPAKRLEPRFESAAASYRRKRADSAGGGSQAAATESGAAPLAAPTHSVISSPGGMFQAVV
LSDSARLSSGTVLVTAPSMSAPNVGVIGYSGAPSLVRTASTVVTNVVKPVSSTPVPIASK
PFPRGSGEGLPLLSPPPSDGATKAEGISVGRFGLLYADKKTQPPSAMPGIQATSPHLVAG
PLIGQGLTAVGKGPANQGSVVTNLLVGAQGYGQAGSAGGAAVPVTVLPPGAIAQQPSVQF
ITQNPPGPGQNGPVPLSILQPQGILSGAAGKAGGITQVQYILPTLPQQLQVAGGKVPAGA
GAPGAASIHFTLPPANGKVIATPQAIPIIQPAPGSSNSNVTVMSSAPKVQSVSPVQAPSP
GTSTHLVSGQVVPPAGLQVQGKVLVPMAPPQVTVRTSTATQLPLVTPPFPVPVQNGSQPA
SKIIQLTPVPVVQPQPSSQSSATLVPPLSPAALQGTVATAVMGSPSQTQKVLLPSSTRIT
YVQSTAGHPLSLGTSASHTQSSAPPATPATTYVQSPVGPAPMALGFTAIGPNGQAIVQPL
LSGQNPLLAPGQVVSPLQSPQLPASCAGQGQVITAIYPSPTGTSPAQPTSHGVVYTVAAT
STVTVSSPTAILPKGGSNTQSPGGPNQGLISTATPAAPPTVSRPQRPPLKPLQKVKATIA
SIPVGSYESSPSPGLARPPGGQQQEPGGSRCYREAEAAGEARTLREAGPQEPPLSPVCRG
SEQNPPPKAQDLKRESWEPVSPPSPQQPQVTEAAPAEIWSQREAGAGEERAVRDPPLGSK
GTETALKFSTSPDWRTAGAEGRSEASAPSAGPLTSSLSPGPSSSTEAPRGGPSTLAPAAA
AASTSEAAPEQKEVPVGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFKPEEVL
PSPTLQSLATSPRAILGSYRKKRKNSTDLDSSTEDPISPKRKIRRRSSCSSEPNTPKSAK
CEGDIFTFDKTGTDTEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATA
AFQARYSDIFPTKVCLQLKIREVRQKIMQAATPTEQAPSTPEPGGPASQGSAAEAGQPLE
LTMAQDCAQGAEATSAATATTAPLPTTAASWDCNQQSSPGGSGSGGNTSSR
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagcgaggaaggctgctggctcctcctcctcctctagcagcagcagcagcagc
agcagcagtcgctccccaccctccactcgggcagccaaggcccagaagcgcaaggccact
gaggaggggcccaagcccgaagaagaagcaggggaggagtctctagatcaagccccgcct
ttcccaggtgcccggtgcctgcagccgcagatggatcccggcctgcaggagttggcaggg
gcgcccgaggacccctacaagctgcccgagggggacagggacccagggactgaggcctgc
ggggcggaagcctccctgaaccgcaagacggccactttcaagtcgcgggcaccctgtagg
aagtgcccggggggcgacgagtcaaacggcagtgaaggtgcggcggggcccgcagaggac
gagcccaggcgctgcccctcgtccagcaccgacaccgccagtgagcactctgcggacgag
aacgacaagggggcgggggatacctgggccacggcctcgagcgactatgacctgcggcag
ctgcgctcgcagcgggtgctggcccggcgcgaagggctctttcagccggccgtagtgaag
cagatccgccgcgggcaggacttgggggtgcagtttgtgggcgaccgcgtcacggcgtac
tacgaaggggctctgggctccggcgcagtggacgtggttctggatgccacgcctccaccg
ggggccttggcggttggcacactggtctgcgcttgtgcggaccccgaggagacggcctac
cgggaaggcaccgtcgtcgaggtgagcgccaagccggcttcctacaaagttcgcttcgcc
tgccccatcgtcctccctggccctgcggcagcccgcaaagactccgcctgggtgacacgc
tcggccctgcgcctcttgcgcccgccgtggagctgcaaagctgcccttgaggacagcaag
ccgcctgaaaagtcacctccgttgccggaagaagagaaggtcgccctggccctcccgtgc
ccggacccgaaacaaccagaagacgcggaagtctccaagatcagcgcctgcgtgcgggca
gaggaaaagtccgtggtggtgccgccccagatcctgtccccgcccaagtctccggctttc
cctcgcctccccgagcagccgtccccactgttgagcccggatgcgagtgggagccgcagc
agcagcgtcatgtccgtggacaaatgcagcaccccgggctcgtctcgctcccggactccc
ctcacggcggcccagcagaagtacaagaagggggacgtggtgtgcacacccaacggcatc
cgcaaaaagttcaacgggaagcagtggcggcggctgtgctcccgggagggctgcatgaag
gagtcgcagcggcgcggctactgctcccgccacctctccatgcgcaccaaggagatggag
agcctctcggaggggcgggccagtgggctgcgggagggcagtgccgaatttgactgggat
gacacctcgcgggacagcgaggccagcagcgcgcggggggactctcggccccgcctggtg
ccccccgccgacctgtcccgcttcgagttcgatgagtgcgaagcggctgtcatgctggtc
tccctgggcagctctcgctcgggcaccccttccttctcgcccgtctccaaccagtctccc
ttctcaccggcaccctctccctctccctcgcccctcttcggcttccgcccggccaacttc
agccccatcaatgcctcgcccgtcatccagagggccgccgcccgcagccgccacgtcagc
gccagcacgccgaagggcgtcggcggcaccgtgttgagccctgagatgctgcaccacgcg
gcctcccgcgagcgccaccactcgggcatcaccttccagaccaacctcactttcaccgtg
cccatgagccccagcaagcggaaagccggggactctcaccacagcagcacaggctcggca
gctgacttccacaagaatgagagcctcgactcgggcgtcgagtccgtctcacacacaccc
actccttccacaccagcgggcttccgggctgtgtcacctgccggagcggggcccttctct
tcccgctcccaacaggcttccccgctcctgctggtgcccccgccggcagggctgacctcc
gaccccagccccaccgtgcgcagggtgcccgccgtgcagagggactcgcccgtcatcgtg
cggaatcccgacgtgccgctgccctccaagttcaccgaaaagcccctggaggggagggtg
ggcagcccgcgggcggggaaggccggctccaaggagcatcttccaggcaaggggcagctg
cagatgccggtgcccatcaacgtgggccggactcttccttccagccagccctgcgtggtt
tccgcctctgagcaggccccgcccatcttcagcgtctcctcccccttccagccggtcgcc
ttccatccttctcctgcagccctcctgcctgtcatcgtccctggagagtacaccagccac
cccacgcccaagaaggagataatcatgggaaggcctgggacagtgtggacaaatgtggag
ccacggtctgtggctgtattcccatggcactcccttgtgcccttcctggctcccagccag
cccgattcctccgtgcagccgaccgaaggccagcagcctgtcagccacccgtctacatcc
aatcagaacaaagaacctccagaatcagctgccgtggcccatgagctccccgctgtgtct
tcgggggctgaatcagggaggccaaacacttcgcaccctgacagcccgactccagtttcc
cagccatcagcggcgactccaggagggagcggagggccagcccagcaggaggacgacgtc
ccagggcactcgcgcctggacagcgagacagagagcgatcacgacgatgcgttcctgtcc
gttgtatcttctgagatgcaactcccactgctgccaggcaagcgtcgtacccagtcattg
agcgctctgcccaaagaccgagattcatcttccgaaaaggatgggcgcagtcctaacaag
agagaaaaagatcacatccggcggcctatgaatgctttcatgatcttcagcaagcgacac
cgggccctggtgcaccaacggcaccccaaccaagacaaccgtaccgtcagcaagatccta
ggcgagtggtggtacgcgctggggcccaaggagaaacagaagtaccacgacctggccttc
caggtgaaagaagcccatttcaaagcacaccctgactggaagtggtgtaacaaagatcgg
aagaagtctagctcggacgtgaagccctcggggccagggggatgctccaaggagacccga
gaacgcagcatgtctgagacgggtaccgctgctgtgccaggaggcccttccgagatgcag
gtgctgctggggccagagggcaaggcaggcatggtaggatccggccacagccatggggag
cggatcctgccctcggcggggcctggcgcacagcgcccccgggccttctcccacagtgga
gtgcatgggatggagagcgaccgtgacagccaggtgctgcaggagctcacccagatgtgc
tcaggacagtctctgtacgtcagtgggaaggggcagttcggggggctgggcccttcaggg
tccccatttgcaaccccaggcgaaggccccaggcactccttgcacctgcacgcctcccgt
gcctcccgttctcagcgcacaaccagtgaggacatgaccagcgacgaggagcgaatggtc
atctgcgaagaggagggtgatgacgacgtcattgctgaggatgggttcaaccctgctgat
gttgacctcaaatgcaaggaacgagtgacggacagcgacagcgagggttccttgggggat
gaatccgacaacaaggactttgggcgcaagctcttctccccggtgatccgctcggctgcg
ctgcctccttcctccggtgccttcgccccctgccgcccgccaccccctctggacttggag
ccacccccgcctccccacagcctcgaccagcagccccctcccaagacgtacggctccttc
cagctggcacccagcaccttcaaggcccaagactcccgaggagggctccgccctcacaac
accccagccaaacgcctggagccgcgcttcgaatcggcggcggcctcttaccggcggaag
cgggcagacagtgctggagggggctctcaggcagcagccacagagtctggggcggccccc
ctggccgcccctactcattcggtcatctcttcacctggtggaatgtttcaggccgtggtg
ctctccgattccgcccgcttgtcctcgggcaccgtgctggtgacggccccgtccatgagc
gccccgaatgtgggagtgattggctacagcggcgcgcccagcctggtccgcacggcctcc
accgtcgtcaccaacgtggtcaagccggttagcagcaccccggtgcccatcgccagcaag
cccttcccgcgcgggtcaggggaggggctcccgctgctcagcccccctccctcggacggg
gccacaaaggcggaagggatttctgtggggcgcttcggcctcctctacgccgacaagaag
actcagccgccctcggcgatgcccgggatccaagccacgtcgcctcaccttgtagccggc
cctctcattgggcaaggcttgaccgctgtggggaaggggcctgccaaccagggcagcgtg
gtgaccaacctccttgtgggagcccaaggctacgggcaagcaggcagcgcgggaggggct
gccgttccggtgactgtcttgccccccggcgccattgcacagcagccctcggtgcagttc
atcacgcagaatccgcctgggcccgggcagaacggcccagtgccgctcagcatcctgcag
cctcagggcatcctctcgggggcagcgggcaaggcaggcggcatcactcaggtgcagtac
atcctgcccaccttgcctcagcagctgcaggtggccgggggaaaggtgccagcgggagcg
ggtgctcctggagctgccagcatccatttcactcttccgccagccaacggaaaggtgatc
gccacaccccaagccatccccatcatccagcctgctccaggaagcagcaacagcaatgtc
accgtcatgtcctcagcacccaaagttcagtcagtgtctccagttcaagctccatctccc
ggcacttcaacccaccttgtgtctgggcaggtggtgccccctgctgggctccaggtacaa
ggcaaggtcctggtgcccatggcacccccacaggtgacggtgcgcacctccactgccacc
cagctgcctctggtgaccccacctttccccgtcccggtgcagaacgggagccagccagcc
agcaagatcatccagctcaccccggtgcccgtggttcagccccagccttcctctcaaagc
agcgccaccttggttccaccccttagcccagctgctctccaaggcactgtggccactgcc
gtcatgggctccccaagccaaacccagaaagtcctcttgccctcctccaccaggatcacc
tacgtgcagtcaacagctgggcaccccctctccctgggcacctcggcctcccacacacag
tccagcgcccccccggccacacctgccacgacctacgttcagtccccagtgggccctgcc
cccatggcactgggtttcacagccattgggccgaatgggcaggccatagtgcagccgctg
ctctcaggtcagaaccctctgctggctccagggcaagtggtgtccccactgcagagcccc
cagctcccggcgtcctgtgctggacaagggcaggtcatcactgccatctaccccagcccc
acggggaccagtcctgctcagcccaccagccacggcgtggtctacacggtggcagccaca
agcaccgtcacagtctcctctcctacagccatcctgcccaaggggggcagcaacacccag
agcccagggggccccaaccagggcctgatttccacagctacccctgccgctcctccaaca
gtttcccgacctcagcggccgccgctcaagcccctccagaaggtgaaggccacgatcgcc
agcatcccggtcggctcttacgaatcctccccctcgccgggtctggcccggccccccgga
gggcagcagcaggagcccggagggtcgcgatgctaccgggaggccgaagccgcgggagaa
gcccggactttgcgggaggcggggccccaggagccgcctctttcccctgtgtgccggggc
agcgaacagaaccccccgcccaaagcccaggatctgaagcgggagtcctgggagccggtg
tcgcccccgtctccccagcaacctcaggtcacggaggcggcgcccgcggaaatctggagc
cagcgggaggcaggagctggcgaggagagggcggtccgtgaccctccactgggcagcaaa
gggaccgagacggccctcaagttctccacttccccggactggagaacggctggtgctgag
ggccgcagtgaagcgtctgccccatccgcaggcccgctgacttcctcgctcagccctggc
ccttcgagctccacggaggcccctagaggaggcccctcgacccttgctccagcagcagca
gcagcctccacatccgaagcagcgcctgagcagaaggaggtccctgtggggaagaaagtc
aaggtccggcctccgccgctgaagaaaaccttcgactctgtcgacaacagggttctgtcg
gaggtggattttgaggagcgctttgccgagctgcctgaattcaagcctgaggaggtgctg
ccctcgcccaccctgcagtcgcttgccacctcgccccgcgccatccttggcagctaccgg
aagaagcgcaagaactccaccgacctggactcctctacggaggaccccatctcccccaag
cggaagatccggcgccgctccagctgcagttcggagcccaacactcccaagagtgccaag
tgcgaaggagacatcttcacctttgacaaaaccggcacagacacggaagacgtacttggg
gagctggaatacgagaaggtgccgtactcctcactccgacgtaccttggaccagaggagg
gctctggttatgcagctcttccaggatcacggcttcttcccttcagcccaagccaccgcg
gctttccaggcccgctactccgacatattccccaccaaggtctgcttgcagctcaagatc
cgggaagtgcggcagaagatcatgcaggcggccaccccgacggagcaggccccaagcacg
ccggagcccggaggccccgccagccagggcagcgctgcggaagcggggcagcctctggag
ctgaccatggcgcaggactgtgcgcaaggagcagaggccacctctgccgccaccgccaca
actgccccccttcctaccacagctgccagttgggactgtaaccagcagtcttccccagga
ggcagcggcagcggaggcaacaccagcagcagatga
DBGET
integrated database retrieval system
