KEGG   Podarcis raffonei (Aeolian wall lizard): 128418377
Entry
128418377         CDS       T09310                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128418377 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:praf03400]
    128418377 (XRCC1)
DNA repair and recombination proteins [BR:praf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     128418377 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT CMAS
Other DBs
NCBI-GeneID: 128418377
NCBI-ProteinID: XP_053253963
LinkDB
Position
8:14804868..14823894
AA seq 655 aa
MPEIAIRHVVSASSSDPTHCAENLLKADTYRKWKAAQAGEKHISAILQFEKEEHIHSIDI
GNEGSAFVEVLAGSSASSSEQNYEVLLVTSSFMSPSESKSGTNLNRVRMFGPDKLVKATA
ERKWDRVKIICTQPYTKSLTYGLSFVRFHSPPENDEVHSKTASPKLTKLGQFKVKEDDND
SLKPGALFFSRASKPLVSPPKASQNNQPSPSYAAASLQTSVSSSPDPSPSAAEKPTTKAS
PKEPTPVKRKFEFSKENSGLSSAANKPQPDTARPAQPASKKLKASPSALPSPKTPPSKKL
PQTQPSEGTANVSFQRLLQGTVFVLSGFQNPFRSELRDKALEMGAKYRPDWTPDSTHLIC
AFANTPKYSQVKGLGGTIVRKEWILDCYRTKRCLPCKRYLMVSPESSSSEKEEESDEDTP
ARHHKPLAHPQRADVPSSNHKPKTLASPKAVPRAPKRASSEEEEEPTTSRSSGIHNNSQA
PAADSGASSSDEDPRGARDNGDEGSGDTDDELRRVEEEHRKKQQGGRRVVPEPDDDPYGG
STDENTDVEEKEEPDQPIPELPDLFVGKHFFLYGEFPSQERRLLNRYIVAFNGQVEDYMN
ERVNYVITAQEWDDTFEEALNENANLSFVRPRWIYNCNQRQKLIPHQPYVVVPRV
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgccggagatcgcaatccgacatgtggtgtctgccagcagctccgacccgacgcactgt
gctgagaacctgcttaaggccgacacctatcgcaagtggaaggctgcgcaggctggggag
aagcacatctctgccatactacagtttgaaaaagaggagcatattcacagcatcgacatt
ggcaatgaaggctccgcatttgttgaagtattggctggcagctctgcctcctccagtgag
cagaactatgaggtgctgctggtcacatcctccttcatgtccccctcggagagcaagagt
ggcaccaacctcaacagggttcgtatgtttggaccagataagcttgtgaaggccacagct
gagagaaagtgggaccgggtgaaaatcatctgtacccagccctataccaagtccttgact
tatggcctctcctttgtgagattccactctcctccagaaaatgacgaggttcattccaaa
accgcttcgccaaagctcaccaagctggggcagttcaaggtcaaggaagacgacaacgac
tccctgaaacccggcgcgcttttcttcagccgtgccagcaaacccctcgtctctccacct
aaagcctctcagaacaaccagccctcacccagttatgctgctgcctcgttgcaaaccagc
gtgtccagttcccccgatccttcgccatcagccgccgaaaaacccaccaccaaagcctct
cccaaggagcccacgccggtcaagaggaagtttgaattcagcaaggaaaattctggtctc
tcatctgcagccaataaaccccagcccgatactgcccgccctgcacagccagcctccaag
aaactcaaagcttctccttcagcactaccttccccaaagacaccaccttccaaaaagctt
ccacaaactcagccttcagaggggacagcaaacgtgtctttccagcgtctcctgcaggga
actgtgttcgtgttgagtggcttccagaatccattccgctctgagctgcgggacaaagcc
ctagagatgggtgcaaagtaccgaccagactggacccctgacagcactcacctcatctgt
gcctttgccaacacgcccaagtacagccaagtgaaagggctcgggggcacgattgtgcgg
aaggagtggatcctggactgttaccgcacaaagcggtgccttccctgcaagcgctacctg
atggtaagcccagaatcttccagcagtgagaaggaggaggagagcgacgaagacacccct
gcccgacaccacaaaccccttgcacatccgcagagagctgacgtgcccagctccaaccac
aagcccaagacccttgccagccccaaagctgtacccagggcaccgaagagggcatcctct
gaagaagaggaggagcccactacctctcggagcagcggcatccataacaactcgcaggcc
ccagcagccgactctggagcgtccagcagtgacgaggatcccagaggtgctcgagacaat
ggagatgagggctctggtgacactgatgatgagctgaggagagtggaagaggagcaccgc
aaaaagcaacaaggggggcggagggtggtcccggagccagacgacgatccgtatggtggc
tccacagatgagaatacggatgtcgaagaaaaagaggaaccagatcagcccatcccagag
ctaccagatttattcgtgggcaaacacttcttcctttatggcgaattcccttctcaagag
cgacgcctcttgaaccggtacattgtggcttttaacgggcaagtggaggactatatgaat
gagcgagtgaattatgtgatcacagctcaagagtgggacgacacatttgaggaggctctg
aacgagaatgccaacctctcctttgtgcgcccccgctggatctacaactgcaaccagcgg
cagaagctgatcccccaccagccctatgttgtggtaccacgagtgtag

DBGET integrated database retrieval system