Podarcis raffonei (Aeolian wall lizard): 128418702
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Entry
128418702 CDS
T09310
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128418702 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128418702 (ARID1A)
03021 Transcription machinery [BR:
praf03021
]
128418702 (ARID1A)
03036 Chromosome and associated proteins [BR:
praf03036
]
128418702 (ARID1A)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
ARID
128418702 (ARID1A)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128418702 (ARID1A)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128418702 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
128418702
NCBI-ProteinID:
XP_053254650
LinkDB
All DBs
Position
8:complement(26491979..26593610)
Genome browser
AA seq
2279 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPSELKKAEVQQRDCSSEEAGGEAAAAAERGGEKQSESEGPPGK
ELQDGAESNGGGAGAEPDLKSSNGNPGPRPVATLNNNLPEPPGGGGGGVSGGSNSSDGVG
TPQQQPPQQQQQQQPPPTHPAALPPPAYGFGQPYGRGAQAAAAVAAAAAFHQHGGQQSPG
MAALQSGGLEQPYSGPTGGPPGPPPPQNSHGGGSSEHGFPNHQYNNYYPTAGRSAGAYPP
PSQAYALSSPRGNAQSPAQAGAKPPASAFQQQRFGAMGPSAAAVGAGGSAGGGSGGGATP
QPTSTPTLNQLLTSPSSARGYQGYPGADYGSGPQDGGATAKAPAAADIASQYTGGTSQGW
AAAATGGQQRSHHAPMSPGSSSAGGGQPLTRTQQPSSPMDQMGKMRPQPYGGNNPYSQQQ
GPQSGQQQGHGYPGQPYGPQTPQRYPMGTLSRTQTAMGTVSYAQQIPPYGQQGPSGYGQQ
SQTPYYNQQSPHPQQQQQPSYAQQPPSQTPHAQPSYQQQQTQSQPPQLQSSQPPYSQQQS
QPPHQQSPSPYPQQSAAAQQHPQSQPPYSQQQSQSPYQQQQAQQSATSALSQQSASYPQS
QSQQQSAYSQQRFPPPQELSQDSFGSQASSAASMASSKGQDDVNLNLQSRPSSLPDLSGS
IDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPAS
VAQSRSGPLSPAAVPGNQMPPRPPSGQSDSILHPSMNQSTITPDRGYIQRTPQMPQYNSP
QPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMPNANYPS
PGMGGTMNPMGAGSQIHGQTGVPPYPGLPPGRGLSHAAMGNRPYGPNMANMPPQVGTGMC
PPPGGRKAQEAAAAAAMHAAAVNSIQNRPSGYPHINQGGMMGTGPPYGQGINSMAGMLNP
QGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPAPKMNNKADGTPKTESKSKKSSSSTT
TNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGG
LTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFATDSK
KSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLQGIRSNSV
GLQDTFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYETKDPYGSMRKGSDPFMSS
GQGPNSGMGDPYNRATGPGMTNMAMGQRQHYPYSPYERVRTEAGMGPETNLGTGTPQPNI
MPSTPDSGMYSPSRYPQQPQQRHDSYGNQFPTQGTSSSSPFPSQQTTLYQPQQQNYKRPM
DGNYGPPAKRHEGELYNVPYSTGQGQAQQQLPPAQTQQPSQQQTAQPSSQQEIYNQYPNT
YPATDRRPAAGPQNQFPFQFVRERVSAPPGSSTQQNIAPQMMGGPIQSTPEGPQQGTMWQ
GRNEMSYSYPNRQSTGSAPQGPAYHGVNRTDEMLHPDQRVNHEGPWPSHGNRQPPYGPSA
PVPPMTRPPQPNYQTQPSMQNHIPQVSSPAPLPRPVENRTSPSKSPFLHSGMKMQKAGPP
VPASHITPAAVQPPMIRRDITFPPGSVEATQPVMKQRRRLTTKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDP
GQRTLLDPERVSKSSSPPPEEGDKEEPQSPNCEEEEEGEEEAAFANKATAPLESNEEKLV
SKFDKLPVKIVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELT
LTHKRAPCNSILRKHSVAESNPVTREGVSPPSDSPPEKRITATMDDMLSARPSSLAEEEG
VRNVEVAKESGKFPFGISPAQSHRNIQILEDEPHSKDETPLCTLLDWQDSLSKRCICVSN
IIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV
EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTL
GPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREM
AVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPPFEPT
SVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcccccgccgccgcgagcagcttgggtgccccggctccatccgag
ctgaagaaagcggaggtgcagcagcgggattgttcgtcggaggaggcggggggcgaggcg
gcggcggcggcagagcgcggcggagagaagcagtcggaaagtgaaggtcccccgggaaag
gagctgcaggacggggccgaaagcaatggcgggggcgcaggggccgagcccgacctgaag
agctccaacgggaacccgggccctaggcccgtcgccacactgaacaataacctcccggag
ccgcccggcggtggtggcggcggtgttagtggcggcagcaacagcagcgacggggtgggg
acgccgcagcaacaaccgccgcagcagcaacagcagcagcagcctccccctactcatccg
gctgccttgcccccgccagcctacggtttcgggcagccctacggtcgaggcgcccaggct
gctgcggccgtcgccgcggccgctgccttccaccaacatggcggacaacaaagccctggc
atggcagcgctgcagagcgggggcctggagcagccgtattcggggcccaccgggggcccc
ccggggccgccccctccccagaactcccacggcggcggcagttcggagcacggcttcccc
aaccaccagtacaacaactactaccctacagccgggcgcagcgctggcgcctacccgcct
ccctctcaggcctacgccctgagctcccctcggggaaacgctcagagccccgcgcaagcc
ggggccaaacctccagcttcggcattccagcagcagcgtttcggggccatggggccctcg
gccgccgccgtcggcgcaggaggaagcgcaggaggaggcagcggcgggggcgccaccccg
cagcccacttccacccccaccctcaaccagctgctcacctccccaagctcggctcggggc
tatcaagggtatcccggggccgactacgggagcgggccccaggatgggggagcgacggcc
aaggccccggcagcagcggacattgcctcccagtacactgggggcaccagccaaggctgg
gcggcagcagccacgggaggccaacaaaggagtcaccacgcgcccatgagccccgggagc
agcagcgctggagggggacagccgctcacccggactcagcagccatccagcccaatggat
cagatggggaagatgagacctcagccttatggaggaaacaacccatactcacaacagcag
ggacctcagtcagggcaacagcagggccacggatatccaggacagccgtatgggcctcag
actccccagagatacccaatgggaactctaagcaggacacaaactgcaatgggcactgtc
tcttatgcacagcagatccctccttatggacagcagggacctagtggatatgggcagcag
agccagactccctattacaaccagcagagtcctcatccccagcagcagcagcagccttct
tatgcccaacagccgccatctcagacccctcacgcccagccttcttatcagcaacagcaa
actcagtctcagcctccgcagctccagtcatcccagcccccatactcccagcagcagtcg
cagccaccacatcagcaatctccatctccgtatcctcagcagtcagcggctgcccagcag
catccacagagtcagcctccctactcccagcagcagtcacagtcaccctaccagcagcag
caagctcagcagtctgctacctcggcgctttctcaacagtctgcatcttaccctcaatct
cagtcgcagcagcagtcggcatattctcagcagcgcttcccacctccacaggagttatca
caagactcgtttgggtcccaggcatcatcggctgcctcaatggcttccagtaaagggcaa
gatgatgtgaatttgaatcttcagtccagaccctctagcttgccggatctctctggttca
atagacgatctgcccatgggtacagaaggagcactgagtcctggcgtaagcacatcaggg
atttctagcagtcaaggagagcagagtaaccctgctcagtctcctttctctccgcatacc
tctcctcacttgccaggcatcagaggaccttccccttcaccagttggatctcctgctagt
gttgctcagtcacgctctggcccactgtctcctgctgcagtaccaggtaaccagatgcca
cctcgaccacctagtggccaatcagacagcatcttgcatccctccatgaatcagtcaacc
ataactcccgatagaggttacatacagaggactccacagatgccccagtataattcccct
cagcctgggtcagccttatctccacgtcagtcttctggaggacagatgcatgctgggatg
ggaccttaccaacaaaattccatgggcagttatggacctcaggggggtcaatacgggcct
caaggtggatatcccaggcagccaaactacaatgctatgcccaatgcaaattacccaagc
ccaggaatgggaggaaccatgaacccaatgggagcagggagtcagatccatggtcaaact
ggtgtaccaccctatcctgggcttcctccagggagaggattgagccatgctgccatgggg
aataggccctatggacccaacatggcaaacatgcctccccaagtagggactgggatgtgt
cctccaccaggtggcaggaaagcacaagaagctgctgctgctgctgctatgcatgctgct
gccgtcaactcaatccagaataggccatctggttacccccatattaaccaaggaggaatg
atgggaactgggcctccctatggccaaggaataaatagcatggctggcatgctcaatccc
cagggcccaccatatccaatgggtgggaatatggccaacaattctgcagggatggctgca
agtcctgagatgatgggactcggggatgttaaactaacaccagctcccaaaatgaacaat
aaggcagatggaacccccaaaactgaatccaagtcgaagaaatccagctcctctactact
acaaatgaaaagattactaaactatatgagctgggtggtgagccagaaagaaagatgtgg
gtagatcgctatttggctttcactgaagagaaagcaatgggcatgaccaatcttccagct
gtgggccggaaacccctagacctgtatcggctctatgtctctgtgaaggagattggaggg
ctgactcaagttaacaaaaacaagaaatggcgtgagttagcaaccaatttgaatgtgggt
acctccagcagtgcagctagctctctgaagaagcagtacatccagtgtctctatgccttt
gagtgtaagattgagcgaggagaagatcctcccccagacatctttgcaactgattcaaag
aagtcgcaacccaaaatacagcctccatccccagctggttcaggctccatgcagggccct
cagacacctcagtccaccagtagctccatggcggaaggaggagacttgaagcccccaact
cctgcatctacgccacacagtcaaatgccccctttgcaaggcatcaggagtaactcagta
ggccttcaggacacctttcccgatggcagtgaccctactttccagaagaggaactccatg
actccaaacccagggtaccagcccagcatgaatacttctgacatgatgggtcgcatgtcc
tatgaaacaaaggatccgtatggcagtatgagaaaaggaagtgatccctttatgtcctca
gggcagggccccaacagtggtatgggtgatccttataatcgtgctacaggtccagggatg
actaatatggccatggggcagaggcagcattatccttatagcccttatgagagagtgagg
actgaagctggaatgggacctgaaaccaatttaggaaccggaacaccccagcccaacatc
atgccttccactcctgattcagggatgtactccccaagccgatatcctcagcagccacag
cagcgacatgattcctatggcaatcaatttcccactcaaggtacatcctccagcagcccc
tttcctagccaacaaaccaccctgtatcagccacaacagcagaattataagcgaccaatg
gatggcaactatggccccccagccaaacgacacgaaggggaactgtacaatgtaccgtac
agcacaggccagggacaggctcaacagcagctgcctccggcacaaacccaacaaccaagc
cagcagcaaactgctcagccttcttcacagcaggaaatctataaccagtatccgaacaca
taccctgccacagatcgccgacctgctgctgggccacagaaccagttcccattccagttt
gtcagagagagggtttctgctcccccaggctctagcacacagcagaatattgctcctcaa
atgatgggtgggcccatacagtccactccagagggcccacagcagggcaccatgtggcaa
gggcgtaacgagatgagctacagctatcccaaccggcagagtactggttctgcaccccag
ggtcctgcatatcacggagtgaatcgaacagatgaaatgctacatccggatcagagggtt
aatcacgaaggaccgtggccttctcatggaaaccgccagcctccttatgggccctctgcc
cctgtgcccccaatgacaaggccgcctcagcccaactaccagacccaacccagcatgcag
aatcacattcctcaggtatctagtccagcacctcttcccagaccggtggaaaaccgcacc
tctccaagtaaatctccattcctgcactcaggaatgaagatgcaaaaggcagggcctcct
gtccctgcctcacatataacaccagcagctgtacaacctcctatgatacgacgggacatc
acattcccacctggatcagtggaagctacacagcctgtgatgaaacaaagacgacgtctg
accacaaaagatattggaacacctgaagcttggagagtaatgatgtctctgaaatctggg
ttactggctgaaagtacgtgggctttggataccataaacattctgctgtatgatgacaac
agcataatgaccttcaaccttagccagctgccagggttgttggagctactagtggaatat
ttccgacgatgcctgatagaaatatttggaatcctgaaggaatatgaggtgggagatcca
gggcaaagaacactattggatcctgagagggtcagcaaatcttcgagtcctcctcctgaa
gagggggataaagaggagccacagagtcctaactgtgaggaggaggaggaaggggaggaa
gaggctgcctttgcaaataaagccacagcacctcttgagagcaacgaggaaaagctagtc
agtaaatttgacaagcttccagtcaagatagtgcagaagaatgacccatttgtggtagat
tattctgacaaacttggccgggttcaggaatttgagagcgggctgctgcactggcggatt
ggtgggggagacaccactgaacacattcaaacccactttgaaagcaaaatggagctgacg
ttgactcacaagcgagctccttgcaactctattttgcgaaaacattctgtagctgagagc
aacccagtcacccgagagggagtatcccctccatctgacagtcctccggagaaaaggata
acggctaccatggacgacatgctttcagcacgacccagctcattggcagaggaggaggga
gtaagaaatgtggaggtggcaaaggaaagcggtaaattcccatttggcattagtccagct
cagagccacagaaacatacaaatcctggaggacgaacctcacagtaaagacgagacgccc
ctctgcacacttctagactggcaggattcattgtctaaacgttgcatctgtgtgtctaac
atcatcaggagtttatcatttgtgccaggcaatgactttgagatgtctaaacaccctggt
ctgctgctgatcttagggaaactgattctcctgcaccataagcatccagaacgcaaacag
gcgccactgacatatgagaaagaagaggagcaggaccaaggagtgagctgcaacaaagtg
gagtggtggtgggactgcttggagatgctgcgtgaaaacactttggtcacattggccaac
atctctggccagctggacctttcaccataccctgagagcatctgtttgcctatcctagat
ggactcctccattgggcagtgtgtccttcagcagaagcccaagatccttttccaaccctg
gggcctaatgctgtcctctcccctcaaagactggttttggaaaccctcagtaaactcagc
atccaggataacaatgtggatttgatccttgcaacgccacccttcagtcgcttggagaaa
ctctacagcaccatggtgcgtttccttagtgaccgaaagaacccggtgtgtcgggagatg
gctgtggtactactggccaacttggcgcagggcgacagcttggcagctagagccattgct
gtgcagaagggcagcattggcaacttgttaggcttcttggaggacagcctggcagccact
cagtttcaacagagccaagccagtttgatgcacatgcagaaccctccctttgagccgacc
agtgtggacatgatgcgtcgggcagctcgagcgctgctcgccctggccaaagtggacgag
aaccactctgagttcacgttatatgagtcacggctgttggacatctccgtgtcacctctg
atgaactcgttggtttcacaagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
