Podarcis raffonei (Aeolian wall lizard): 128418751
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Entry
128418751 CDS
T09310
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
praf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128418751 (SRRM1)
03015 mRNA surveillance pathway
128418751 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128418751 (SRRM1)
03041 Spliceosome [BR:
praf03041
]
128418751 (SRRM1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128418751 (SRRM1)
Spliceosome [BR:
praf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
128418751 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
128418751
NCBI-ProteinID:
XP_053254734
LinkDB
All DBs
Position
8:complement(28206290..28234270)
Genome browser
AA seq
904 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKENREKRDRSRSPRRRKSRSPS
PRRRSSPIRKERKHSHSRSPHHKTKSRSVTPAPEKKEETPEPEPSIKIKETLIQEATSTS
DILKVPKIEPVPDTKEPSPERISKKEREKEKEKNRQRTPSRSKSRSKSRSRSASHSRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRIPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRVVSSPPRKTRRLSPSASPPRRRHRPSPPLTPPPKPRRSPTPQQ
SNRARKGRGSVSPSRTSAPKRKSIEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQ
RRQYRRQNQQSSSDSGSSSSSEEERLKKSNVKNGEVGRRRRHSHSRSPSPSPRKWQKDSS
PRMQMGKRWQLPIVKSRRRRSPSPLPTRRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRH
SPTPRRYSPPIQRRYSPSPPPKRRTASPPPKRRASPSPQPKLRVSRSPPPKQRSSPPPKR
RSPSISSKHRKGSPPSRSNRDARSPLQNKRHSPSPQPRPSRPSASPPLLRRGPSSSPQRR
HSPSPSTRPIRRVSRTPEPKKSKKVSTPSPHSVRRGSSSRSVSGSPEPPPKKHPVPPSPA
RSRSPSAHWSPPAPAKKAKSPTPSPSPVRNSDQEGGSKKKKKKKDKKHKKDKKHKKHKKH
KKEKAAVAAAMTVFTTSAQEDQEKNMEPQKETESEAEDNLDDLEKHLREKALRSMRKAQA
SPPS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaactagcgctgaacaggacaaccgcttcagcaacaaa
cagaagaagctactaaagcaactgaaatttgcagaatgtctggaaaagaaagtggacatg
agcaaagtaaacctggaagtaatcaagccatggataacaaaaagagtaacggaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagag
ttcatgggagaactgtggccactactgttaagtgcacaagaaaacattgctggtattcca
tctgctttcctggagctgaagaaagaagaaataaaacagagacagattgaacaggaaaaa
ttggcttccatgaagaaacaagatgaagacaaggataagagagacaaggaagataaagaa
aatagagaaaagagggacagatcccgaagtcctagaaggcgcaaatcaaggtctccttcc
cctagaagacgctcatcccctatcaggaaagagagaaaacacagccattcccgatcccca
caccataaaacaaagagtcgtagtgttactcctgcaccagaaaagaaagaagagactcct
gagccagaaccttcaatcaaaataaaagaaacattgatccaggaggccacatctactagt
gatattttgaaagtccccaaaattgagcctgtgccagataccaaggagccatctccagaa
agaatttccaagaaagaaagggagaaagaaaaggaaaagaatcgtcaaaggactccttcc
cgatccaagtcaaggtcaaagtctcgctcacggtctgcatctcattcaagaccaagaagg
cgtcatagatcacgatccaggtcttactcaccaagaaggcggcctagcccaagacgacgc
ccatctcctcggagaagaaccccaccaagacgcattccacctccacccagacacagaagg
agtagatctcctgtgagacggaggagacgatcatcagcatctttgtcaggaagtagttcc
tcttcctcctcttcacgttcccgatctccaccaaagaaaccacctaagagagttgtctcc
agccctcctcgtaagacacgtagactgtcaccttcagcaagtcctcctaggcgaaggcac
cgcccctccccacccctaactccacccccaaagccccgccgatctccgacgcctcagcaa
tcgaaccgtgcaagaaaaggccgaggctcagtttctcccagtagaacctcagcaccgaaa
cgtaaaagtattgaaaaaagggaatctccctcaccagcaccgaaacctagaaaagtagaa
ttgtcagaatcggaagaagacaaaggtggtaaaatggcagctgcagattctgtgcaacaa
agacggcagtatagaaggcagaaccagcagtcttcatctgattctggttcatcgtcatca
tccgaagaagaacggctgaaaaagtcaaacgtaaagaatggtgaagtgggtagacgccgg
cgacactcgcattcccgtagcccttctccatctccacgaaagtggcagaaagattcttcc
cctcggatgcagatgggaaagaggtggcagttgccaattgttaaaagtaggaggaggcgc
agtccatcgccactgcctaccagaagacggcgctctccttcccctgcccctcctccaaga
cggcgtagatcaccttcattaccacgccgaaggtctccatcaccaccacctcgccggcac
tctcccacacccagaagatattctcctccaatacaaagaagatactctccttcaccccct
ccaaagagaaggacggcttctcctcctcccaaacgaagggcatctccttctccacagccg
aagcttagagtctcccgttccccaccaccaaaacaaagaagttctccacccccaaagaga
cgctcgccatcaatatcttccaagcacaggaaaggatctccgcccagcaggtccaaccgt
gacgcccgttcccctctgcagaacaaacggcattctccttcgccacagcctaggccttcc
cgtccttctgcaagtcccccgctgctgcgccggggaccttcatcttctccccagcgaagg
cattctccatcaccaagcaccaggcccatcagaagagtctcgagaaccccagagccgaaa
aagtctaagaaggtttccacaccaagtccacattctgtgagaaggggatcttcatccagg
tctgtttcaggatctcctgagccacctcctaagaaacatccagtgcctccatctcctgct
cgatctcgatcgccttctgctcactggtcgccaccagcacctgcaaagaaggctaaaagt
cctacaccaagtccatcaccagtaaggaattctgatcaggaagggggtagcaagaagaag
aagaaaaagaaggataagaagcataaaaaggataaaaagcacaagaagcataagaagcat
aagaaagagaaggctgcagttgctgctgcaatgactgtttttaccacgtctgcacaggaa
gaccaggagaaaaatatggagccccaaaaggagactgagagtgaagcagaagataacctg
gatgacttggaaaagcatctgcgtgagaaggctctgaggtcaatgaggaaggcgcaagcg
tctccaccatcttag
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