Podarcis raffonei (Aeolian wall lizard): 128418824
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Entry
128418824 CDS
T09310
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
praf01009
]
128418824 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128418824 (SFPQ)
03041 Spliceosome [BR:
praf03041
]
128418824 (SFPQ)
Protein phosphatases and associated proteins [BR:
praf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128418824 (SFPQ)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128418824 (SFPQ)
Spliceosome [BR:
praf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128418824 (SFPQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
128418824
NCBI-ProteinID:
XP_053254871
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All DBs
Position
8:30044798..30062240
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AA seq
669 aa
AA seq
DB search
MSRDRFRSRGGGFHRRGGGGGRGGLPGNHDFRSPPPGMAGGMGQSRGGHHHIGGGLGGPP
KPEPAKPPSSASTPPSSAASVSVSSSPAAASPSVGPTQNQVGQAPPVSSSAPTPNSTSAP
AASAGLQSGGRGGDQPPSQQQSAAPSQSPVQGGPKKGPGQSSGGGGGQSGLKGGPGGPQQ
GGGPKGGGPGQHRGGGERRGGQGQHQHQHQHPSQQQHQHSQQQQQQQGAGGEKMSDAEGF
KANLSLLRRPGEKTYTQRCRLFVGNLPADITEEEFKRLFSKYGEPGEVFINKGKGFGFIK
LESRALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIE
RAIVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDG
LPEKLAQKNPMYQKERETPPRFAQPGSFEYEYSQRWKSLDEMEKQQRDQVEKNMKDAKDK
LESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEIQLRQEEERRRREEEM
MIRQREMEEQMRRQREESYSRMGYMDPRERDMRMGGTSTMNMGDPYGTAAQKFPPLGGGT
GLGYETSPGVGQASMSGSMMGSDMRPERFGQGGAGPVGGQGPRGMGPGTPAAYGRGREEY
EGPNKKPRF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagaccgtttccgtagccgtggaggcggcttccatcggcgcggaggcggcgga
ggccgaggcggcctcccggggaaccacgacttccgttctccgccgccgggcatggcaggc
gggatgggccagtcccgcgggggccaccaccacattggcggtggtcttggaggccccccg
aagccggagcctgccaagccacccagctcggcctccactccgccttcctccgcggcctcc
gtctccgtttcctccagcccagcagccgcgtcgccttccgtggggcccacccagaaccag
gtcggccaagcgcctccggtctcttcctccgcccccactccgaactcgacctccgctccg
gctgcctccgcggggctccagagcggcggccgaggtggggatcagccgccgtctcagcag
cagtctgcggcgcccagccaaagtccggtccaggggggccctaagaagggtcccggtcag
tcctccgggggcggcggaggacaaagtggcttaaagggcggaccgggaggcccccaacaa
ggaggaggccccaagggcggagggcccggacagcaccgcggcggcggcgagaggcgcgga
ggacaaggccagcatcaacaccagcaccagcacccttcgcagcagcagcaccagcactcg
cagcagcagcagcaacagcagggtgccggcggggagaaaatgtccgatgcggagggcttt
aaagccaatttgtcgcttctgagacggcctggagagaagacctacacacagcgctgtcgt
ctctttgttgggaacttgcctgctgatataacggaggaggaatttaagaggttattttct
aaatatggtgaacctggtgaagtctttatcaataaaggaaaaggctttggctttattaaa
ctggaatcccgagctctggctgaaattgcaaaggctgaacttgatgatactcccatgaga
ggacggcagcttcgtgtgcgttttgccacccatgctgctgctctttctgtgcgtaatctc
tccccatatgtatccaatgagttgctggaggaagcattttctcagtttggcccaatcgaa
agagctattgtgattgtagatgatcgtggcagatcaacaggaaagggcattgttgaattt
gcatctaagccagcagctcggaaagcatttgaacgttgctctgaaggtgtctttcttttg
acaactactccaagacctgttattgtggagccccttgaacagttggatgatgaagatggt
cttccagaaaagctggctcagaaaaatccaatgtatcaaaaggagagagagactcctcca
cggtttgcacagcctggaagtttcgaatatgaatactctcagcgatggaagtctttggat
gaaatggagaaacaacagagagatcaggtggagaaaaacatgaaagatgccaaggacaaa
ctggaaagtgaaatggaagatgcataccatgagcatcaggcaaatcttttgcgccaagat
ctcatgaggcgacaagaagaactgaggcgtatggaagaacttcacaatcaagagatgcaa
aaacgcaaagaaatccagctgagacaggaagaagagcgccgtaggcgggaggaagagatg
atgatccgccaacgtgagatggaagaacaaatgagaagacagagagaagaaagttatagt
agaatgggttacatggaccctagggagagggacatgagaatgggaggtaccagcacaatg
aacatgggagatccttatggtacagctgctcagaaattcccacctttaggaggtggtact
ggccttggctatgaaaccagtcctggagttggacaagcatctatgagtggctccatgatg
ggaagtgatatgcgcccagagcgatttgggcagggaggtgcggggcctgtaggtggccag
ggccctagaggaatggggcctggaactccagcagcttatgggagagggagagaagaatat
gaaggcccaaacaaaaaaccccgattttag
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