Podarcis raffonei (Aeolian wall lizard): 128419025
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Entry
128419025 CDS
T09310
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128419025 (RFWD3)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128419025 (RFWD3)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128419025 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
WD40_CDC20-Fz
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_THOC3
WDR55
EIF3I
Beta-prop_WDR3_1st
zf-rbx1
Beta-prop_EML_2
zf-RING_5
zf-RING_11
Rtf2
Beta-prop_WDR36-Utp21_1st
WD40_2
Myo5a
zf-UDP
zf-ANAPC11
zf-C3HC4_4
Beta-prop_RIG_2nd
WD40_Prp19
DUF7837
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
128419025
NCBI-ProteinID:
XP_053255239
LinkDB
All DBs
Position
8:36662798..36676118
Genome browser
AA seq
717 aa
AA seq
DB search
MSHQEAMDVDLAPAAEETESQAAAASRLQEPAATDGDASTSGAPRPAASRSSWGAFVGER
EPRRPPPPRARRNPPRQQQQQQGPRAASAAASSSSSQRASRARSTAPLDSYFQINRTQAT
AASHILAGHSGNSSDETVVLSDSESNSSSSSTEEEEETVGALEEAPGPANLGVSDATQME
PPGGDSVGPEHPDARGATALQKKTTPLKRTHLAAPLAPLGEEEESGDTCAICFEEWTNAG
EHRLSALRCGHLFGYSCIERWLKGQVGKCPQCNKKAKRSDIVVLYARTLKALDTSEQEHM
KSSLEKEQMLRRKAELESAQSRLQLQVLTDECSKLRQQVQELKALMARHNTLSSQQPSNS
RSCFPGCLSSSQGQHKYHFERATLVSQVGNCRVMAYCDPLSCLVVSQPSPQSTLIPGCGI
KMMSAVNSKSSQYVPIHSKQIRGLAFSNRADGLLLSAALDHTLKLTSLTTNTVVQTYNTG
RPVWSCSWCLDDTNYVYAGLVNGSVLVYDLRDTSSHVQELAPQKSRCPVVSLSYLPRMAS
ASLPYGGLVSGTLEGACFWEQKASGSYRPHHLLLEPGGCIDLQTEASTRHCLATFRPNRN
NNCLRCVVMELTSTQLTDGTEDVICSCRPVQTLTAGPSCKLLTKNAIFQSPEDDGSILVC
AGDEASNSAMLWDAGSGSLLQKLPADLPVLDVCPYEVNRNSFLATLTEKMVKIYKWQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaggaagcgatggacgtggacttggcgccggcggccgaggagaccgagtcg
caagccgccgccgccagccgcctacaggaaccggccgcgacagacggggacgcctcgacg
tccggggcgcctcggccggcggcttctcgctcttcatggggcgccttcgttggggagcgc
gagccgcggaggccgccgccgcctcgagccaggaggaacccgcctcggcagcagcagcag
cagcagggaccgcgcgccgcctcagccgccgcctcctcctcctcctcccaacgggcctcc
cgagccaggtccacagcaccattagacagttatttccagatcaacaggacacaagcgacg
gcagcatcacacatcctagcaggtcacagtgggaacagctcagatgaaactgtggttcta
agtgattctgagagtaacagcagcagcagctccactgaggaggaagaggagacagtgggt
gcccttgaggaggcacctgggccagccaacttgggagtttctgatgcaacccaaatggag
cctcctggaggggattctgttgggccagagcatcctgatgctagaggtgccactgctctc
cagaagaagacaactccgttaaagagaactcacctagctgctcctctggctcctctgggt
gaggaagaggagagtggtgatacctgtgccatctgctttgaagagtggacaaatgctggg
gagcaccgtctttctgcactgcggtgtgggcatctctttggctatagctgcattgagagg
tggctgaagggacaagtgggcaaatgcccacagtgtaataagaaagccaagcgctcagat
atagtagtcctttatgctcgtaccctgaaagcgctcgacaccagtgaacaggaacacatg
aaaagctctttggagaaggagcaaatgctgcgaaggaaggcagagctggaatccgcacag
agccgcctccagctgcaggtcttgacagatgaatgcagtaaacttcggcagcaagttcag
gaattaaaggccctgatggctcgccacaacaccctttcctctcagcagcccagcaactct
cgctcatgctttccaggctgcctctcctccagccagggccagcacaagtaccactttgag
agggccaccctagtgtctcaggtgggcaactgccgggttatggcatactgcgacccactg
agctgccttgtagtgtcgcagccatctccacaaagcaccctcattcctggatgtggaatt
aagatgatgagtgctgtcaactcaaagagcagccaatatgtccccatccacagcaagcag
atccggggcttggctttcagcaaccgtgcagatggcttgctcttatctgctgctttagac
cataccctcaagcttaccagcttgactacaaacaccgttgtgcagacatacaatactggt
cgacctgtctggagctgcagctggtgcctggatgacaccaactatgtctatgctggcttg
gtcaatggctctgtcttggtgtatgacctgcgggacacaagctctcatgtccaggagctt
gctccacagaagtccaggtgccctgtggtgtccttatcgtatcttcctcgaatggcctct
gcctcactgccctatggtggactggtatctgggacactggagggagcctgcttttgggaa
cagaaggccagtggctcttatcggcctcaccacctcctcctggagcctggaggttgcatt
gaccttcagacagaggccagcacacggcactgccttgcaacattcagacccaatagaaac
aacaactgtttacggtgtgtggtgatggagctgacctctactcagctgactgatgggact
gaggatgtgatctgttcatgccgtccagttcaaactcttactgcgggtccatcgtgcaaa
ctcctgaccaaaaatgccatcttccagagtcctgaagatgatggcagtattcttgtgtgt
gctggggatgaagcatcaaactctgccatgctctgggatgcagggagtggctccctgctg
cagaaactccctgctgaccttcctgtgttagatgtctgcccctatgaggtgaaccgcaac
agcttcttggctaccttgacagaaaagatggtgaagatctacaagtggcaatga
DBGET
integrated database retrieval system
