Podarcis raffonei (Aeolian wall lizard): 128419082
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Entry
128419082 CDS
T09310
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128419082 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128419082 (SF3B3)
03041 Spliceosome [BR:
praf03041
]
128419082 (SF3B3)
03036 Chromosome and associated proteins [BR:
praf03036
]
128419082 (SF3B3)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
128419082 (SF3B3)
Spliceosome [BR:
praf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
128419082 (SF3B3)
Complex B
128419082 (SF3B3)
Complex C
U2 SnRNP specific factors
128419082 (SF3B3)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
128419082 (SF3B3)
TFTC complex
128419082 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
128419082
NCBI-ProteinID:
XP_053255369
LinkDB
All DBs
Position
8:complement(38759082..38792464)
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AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANGG
DDWHVLVGVAKDLILNPRSVAGGFVYTYKLINSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttataacctaactctgcagcgagccaccgggatcagttatgccatccatggc
aacttttcaggtaccaaacaacaagaaattgttgtttctcgaggcaaaatcttggagttg
cttcgtcctgatccgaacacaggaaaagttcatactttgctgacagtggaagtctttgga
atcattcgctctctcatggccttcagattaactggtggaactaaagactacattgtggtg
ggcagtgattcaggtcgcattgttatcttggaatatcagccctcaaaaaatgtgtttgag
aagattcaccaggaaacctttggcaagagtggctgtcgcagaattgttcctggacagtat
ttggctgtggatcctaaggggcgagctgtcatgatcagtgccattgagaagcagaagtta
gtgtacattctgaacagggatgctgcagcccgactcacaatttcttccccattagaagcg
cataaagccaacaccttggtttaccatgtagttggagtagatgtggggtttgaaaatccc
atgtttgcctgtctggaaatggattatgaggaagctgacaatgaccccacaggagaagcg
gcagccaacacccagcaaaccttgacattttatgagttagatctgggtttgaaccatgtt
gtcaggaaatatagtgaacccttggaagaacatggcaacttccttattacagtccctgga
ggttctgatggtcccagtggagtgctgatttgttctgaaaactacatcacctataaaaac
tttggtgaccaaccagatatccgatgtcccattcccaggagaaggaatgacttggatgac
cctgaaagaggcatgatttttgtctgctctgctacacacaagaccaagtctatgttcttc
ttcttggctcagactgagcagggtgacatcttcaaaatcaccttggagactgatgaggac
atggtaacagaaattcgactcaagtactttgatacagttcctgtcgctgctgccatgtgt
gttctgaaaactgggttcctctttgtggcttctgagtttggaaaccactacctctatcag
attgctcatctgggggatgatgatgaggagccagagttctcctctgccatgcccttggag
gaaggagacacattctttttccagccacggcctctcaagaacttggtgctggtggatgaa
ctggacagcctgtctcccatcttgtgttgtcagatagctgatctggctaatgaagacacc
cctcagttatatgtggcctgtgggagggggcctcggtcgtcactgagggtccttagacat
ggacttgaggtatctgaaatggccgtctcagagttgcctggtaaccccaatgctgtatgg
acagtgaggaggcatgttgaagatgaatttgatgcctatatcattgtgtccttcgtcaat
gccaccctggtactgtctatcggagaaactgtagaggaggttacagactcaggattcctt
ggtactacgcccaccttgtcttgctcattgttgggagatgatgctttggtgcaggtttat
cctgatggcatccggcacatcagagcagataaaagagttaatgagtggaaaacaccaggg
aagaaaaccatcgtcaaatgtgctgtgaatcagagacaagtggtgatcgcactgacaggg
ggagagctggtctactttgagatggacccgtcagggcagctgaatgaatacacagagagg
aaggagatgtctgctgatgtggtgtgcatgagcttggccaacgttcccccaggagagcag
cgctcccggttccttgctgttgggctggtggacaacactgtgcgcatcatttccctcgac
ccctctgactgtcttcagccgctgagtatgcaagctctccctgcccagccagaatcactg
tgcattgtggaaatgggtggagctgagaagcaggatgaactgggagagcggggctcgatt
ggcttcttgtacctgaacattggcttgcagaacggtgtccttctccgaactgtccttgat
ccagttactggtgacctctctgacacaaggaccaggtatctgggctcgcgccctgtgaag
ctcttccgagttcggatgcaaggccaagaggcggtgctggccatgtcaagccgttcttgg
ctgagttactcctatcagtcccgcttccacttaacacccctctcatatgaaacgttggag
tttgcctctggctttgcttcagagcagtgtccagagggcatagtagccatctcaacaaac
acactgaggattttggccctggagaagcttggagctgtcttcaaccaggttgccttcccg
ttgcagtacactcctaggaagtttgtcatccaccctgagagcaacaacctaatcatcatt
gagacggaccacaatgcttatactgaggccactaaagcccaaaggaagcagcagatggcg
gaggaaatggtggaagctgcaggggaagatgagagggaactagctgcagagatggcggca
gcgtttctgaatgagaaccttcccgagtccatctttggtgcccccaaagcaggaaatgga
caatgggcgtctgttgtccgggtgatgaaccccatccaaggaaacactttagatctagtc
cagctggagcaaaatgaagctgccttcagtgtggcagtgtgccgatttgccaatggtggt
gacgactggcatgttctagtgggcgtagccaaggacctcatcctgaacccacgctctgtg
gctggaggctttgtctacacctataagttgataaacagtggggagaagcttgagttcttg
cacaagaccccagtagaggaggtaccagctgctattgcccccttccaaggcagagtgctc
attggtgtggggaaactcttgcgggtatatgacttgggcaagaagaagctgctccggaag
tgtgagaataagcacattgccaactacatctgtgggatccagaccattgggcaccgagtg
atcgtctcggatgtccaggagagcttcatctgggtgcgctacaagaggaacgagaaccag
ctgatcatttttgcagatgacacccacccccgctgggtcaccactgcctgccttctcgac
tatgacacagtggctggagctgacaagtttggcaacatctgtgtggtgcggctgccgccc
aacacaaatgatgaggtagatgaggacccaactggaaacaaggcgttgtgggatagaggc
cttcttaatggggcttctcaaaaggcagaggtgattatgaactaccatgtaggggaaaca
gtcctgtccctgcagaagacgactctaatccccggaggctctgaatctcttgtctacacg
accttatctgggggcattggcattctggtcccgtttacatcacatgaggatcatgacttc
ttccaacacgttgagatgcatctgaggtctgaacaccctcctctctgtggacgagaccac
ctcagcttccgctcctattacttcccagtgaagaatgtcattgatggggatctgtgtgag
cagttcaactccatggagcccaacaagcagaagaacgtgtctgaagagctggacaggacc
ccaccagaggtgtccaagaagctagaggacatccgcacccgctatgctttctga
DBGET
integrated database retrieval system
