Podarcis raffonei (Aeolian wall lizard): 128419115
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Entry
128419115 CDS
T09310
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04137
Mitophagy - animal
praf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128419115 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128419115 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128419115 (AMFR)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128419115 (AMFR)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128419115 (AMFR)
Multi subunit type E3
ERAD complex
128419115 (AMFR)
LMBR1L-GP78-UBAC2 complex
128419115 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
128419115
NCBI-ProteinID:
XP_053255435
LinkDB
All DBs
Position
8:39385834..39420617
Genome browser
AA seq
648 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTALSALALLGSSLSAYRALSQAAERTEEPPGVRLQQETGGEGG
GEGEEGDLSPRTGPAALDVAYYLLSDSLCVWVLVNTACCILMLIAKLIQGVVFGPLRVSE
RQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSF
SPTTPMNSHIRVLTLLVAMLLSCCGLAVVCGIIGYTHGMHTLSFMAAESLLVTVRTVHVI
LRYVIHLWDLNHEGTWESKGTYVYYTDFIMELMLLSLDLMHHIHMLLFGNIWLSMASLVI
FMQLRYLFHEVQRRLRRHKNYLRVVGNMEARFAVATPEELATNNDDCAICWDSMQAARKL
PCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDNHRAREDHQRENLDENLAPVAVAEGRPH
LNQHNHFFHFDGSRIASWLPSFSVEVMHTTSILGIAQASNSQLNAMAHQIQEMFPQVPYH
LILQDLQMTRSVEITTDNILEGRIQVPFPTQRSDSIRPALNSPLERHNTDQEDTEEVTQT
ERDSLELNSWLEDVAEFNEAEAESIETEDFEVRGSRFSKSADERQRMLVQRKEDLLQQAR
RRYLNKTSDDPSSDDYLQAEGATSDPITLRRRMLAAAAERRLQKQDPS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcttggagcgcttcccttggcccagcttgcgcacttacacggcgctc
agcgccctggccttgctgggcagcagcctcagcgcctaccgcgccctcagccaggccgcc
gagcgcacggaagagccccccggggtgcggctgcagcaggagaccggaggagaaggagga
ggagaaggagaggagggcgacctgtcgccgcggaccgggccggccgccctggacgtcgcc
tattacttgctctccgacagcctttgcgtttgggtactggtgaatacggcttgctgtatt
ttgatgctgattgctaaactaatacagggtgttgtgtttggtcccctccgtgttagtgaa
agacagcatctcaaggataaattttggaacttcatcttctacaagttcatctttattttt
ggtgtactaaatgttcagacggtggaagaagtggtcatgtggtgcctttggttctccggg
ctcgtgtttctgcatcttatggttcagctctgcaaggataggtttgaatatctctccttt
tcacccaccacaccaatgaacagccacatcagagtcctgaccctgctagtagctatgctt
ctttcctgctgtggactagcagttgtgtgtggtattattggctatacccatggaatgcac
acattatctttcatggcagcagagtccctacttgttactgtgagaactgtgcatgtgatt
ttacggtatgtcattcatctctgggatctcaaccatgaaggtacctgggaaagcaaggga
acgtacgtttattacacagacttcatcatggagctaatgcttttgtcactggatctgatg
catcacattcacatgctgctgtttggcaatatctggttgtcgatggccagcctggtgatc
tttatgcagctccgttacctgttccatgaggttcagcgcagacttcgccgccacaagaac
tatctccgtgtggttggaaatatggaagcaaggtttgcggtggcaacacctgaagagctg
gcaaccaacaatgacgactgtgccatctgctgggattccatgcaagctgcacgtaaactc
ccttgtgggcatcttttccataactcatgcctgcgctcctggcttgaacaagacacttcc
tgccctacctgtagaatgtccctgaatatcaccgacaatcaccgtgccagggaagatcat
caaagggagaacctggatgaaaatttggctcctgtggcagtagctgaaggcagacctcac
ctgaaccaacacaatcacttcttccactttgatggttctcgcatcgctagctggctgccc
agcttctcagtggaggtgatgcataccaccagtattcttggtattgcacaagcaagcaac
tctcagctcaatgccatggcacatcagattcaggagatgtttcctcaggttccttaccac
ctaattctgcaggatctgcagatgacgcgttctgtagaaataacaacggacaacatttta
gaggggcgtattcaagtgcctttcccaacacagcgttcagatagcatcagacctgcattg
aacagtcccctggaaagacacaacactgatcaggaggacacagaagaggttactcagacg
gagagagactcactggaactcaactcatggttggaagacgtggcagagttcaatgaggca
gaagcagaatccattgagacagaagactttgaagtgagagggagccggttttccaagtca
gctgacgaaagacagaggatgttagtacagcggaaggaagaccttttgcaacaagctcgc
aggcgttacctcaacaaaacctctgatgatcctagctcagatgactacttgcaggccgaa
ggagcgacttcagaccctatcaccctgcgccggaggatgctggccgctgcagcagagcga
agacttcagaagcaggatccctcttaa
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integrated database retrieval system
