Podarcis raffonei (Aeolian wall lizard): 128419331
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Entry
128419331 CDS
T09310
Symbol
CDH1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04371
Apelin signaling pathway
praf04514
Cell adhesion molecules
praf04520
Adherens junction
praf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128419331 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128419331 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128419331 (CDH1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128419331 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128419331 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128419331 (CDH1)
04090 CD molecules [BR:
praf04090
]
128419331 (CDH1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128419331 (CDH1)
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Major cadherins
128419331 (CDH1)
CD molecules [BR:
praf04090
]
Proteins
128419331 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
RET_CLD1
Cadherin_4
BACON_2
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
128419331
NCBI-ProteinID:
XP_053255855
LinkDB
All DBs
Position
8:complement(48866388..48901150)
Genome browser
AA seq
888 aa
AA seq
DB search
MAMLLPLPGRPSGLCLFLLLLQTGRWLCEETAAHCQPGFSQQAYTFNVPRSNLERYRVLG
KVNFEGCSERTHRPFASDDTRFRVRSDGVVVVKRPVQLHVHEWHFFIHAWDGAGKKHSAK
VTLRSHGHGSHKQHPHAEPYSLGHGEVLTFPVSGPGLRRQKRDWVIPPIVCSENERGPFP
KQLVQIQSNKNKETTVFYSITGQGADTPPVGVFTIERESGWLKVTRPLDREDMDRYVLFS
HAVSVNGQPVEDPMEIIIKVSDQNDNKPIFTQSVFEGSVAEGAKPGTPVMQVSATDKDDA
VNTYNGVITYFIISQEPKQPYSQMFTINNETGWISVITTGLDREEFPQYTLVIEARDMLG
EGLSTTGKAVITVTDTNDNQPIFDPLTYVSTVPENKVGFQVARLLVKDADQPGTVAWKAK
YTIVKGNEEGNFEVATDPQTNDGLLTTIKGLDFEAKDLFTLLVTVVNEVPFSVTLPTSTA
TITVNVRDENEAPIFNPPEKSVTKSEDLPAGQLVTTYTAQDPDTNQKQTVSYSIGSDPAG
WLKINPENGIIETKAPLDRESKFVVDNTYTALILASDNGMPLLTGTGTLLLYLEDVNDNG
PVPDPRSFDICNRSPERKELNIVDKDLPPNTQPFKAMLLLGSSANWTVEVNGDKLVLELT
KQLEPGEYSIALELQDAGEVSQTTTVKAQVCDCEGAAKNCEKRAYIAGGMGIPAILGILG
GILGFLILLLLLLLFVRRRKAVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDYDMSQLHRG
LDSRPEITRNDVVPTLMPAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDY
EGSGSEAASLSSLNSSNGDRDQDYDYLNDWGNRFKKLADMYGGGEEED
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgctgctgccactgccgggacgcccgtcggggctttgcttattcctgctgctc
ttacagactggaaggtggctttgtgaggagacggcagcccattgtcaaccaggcttcagt
caacaggcttacactttcaatgtgccccggtctaacttggaaagatatcgtgtgttgggc
aaggtaaactttgagggatgctcagaaaggacacaccgacccttcgcttcggacgacact
cgcttcagggtgcgctcggatggcgtggtggtggtgaaaaggcctgtgcaactccacgtt
cacgagtggcacttcttcatccatgcctgggacggggctggcaagaaacactctgccaag
gtgacgttgcgaagtcatggccatggatcccacaagcagcatcctcacgcggagccctat
tcccttggtcatggagaggtgctgaccttcccagtatccggcccaggcctgaggaggcag
aagagagactgggtcatcccacccattgtttgctctgagaacgagagaggtcctttcccc
aagcaactggtgcagatccaatctaataagaataaagagacgacagtcttctacagcatc
actgggcagggggctgacactcctcctgttggagtcttcaccattgagagggaatctggc
tggctgaaggtgacccgcccactggacagagaagatatggacagatacgtgcttttctct
catgctgtgtctgtgaatgggcagcctgtggaggaccccatggagatcatcatcaaggtc
agcgaccagaatgataacaagcccattttcacccagagcgtctttgaaggatctgtagca
gaaggagccaagccaggtaccccagtgatgcaagtgtctgcgacggacaaagatgatgcc
gtgaatacctacaatggggtcatcacctacttcataatcagccaggagcccaagcagccc
tacagtcagatgttcaccatcaacaatgaaacagggtggatcagtgtgatcacaacaggc
cttgaccgagaggaattcccccagtacacgctggtcatcgaagctagagacatgttagga
gaaggcttaagtactacagggaaagcagtgattactgtcacggacacgaacgacaaccag
ccaatatttgacccactcacgtacgtttcaactgtgccagagaacaaggtgggattccaa
gttgccaggcttttggtgaaagacgcagatcagccagggaccgtagcatggaaagccaag
tacaccattgtgaaagggaacgaggaaggcaactttgaagtggctaccgatccccaaacc
aatgatggtctcctgacaaccattaagggtctggactttgaggcgaaggatctcttcacc
cttctggttactgtggtgaatgaagttcccttctcggtgactctcccaacatccacggcc
acaatcactgtcaacgtaagggatgagaatgaagcccccatctttaacccccctgaaaag
tctgtgacgaagtctgaagacctccctgctgggcagctggtgactacctataccgctcag
gaccccgacacaaatcaaaagcagacggtcagttattctattgggagcgacccagcaggg
tggctgaagattaaccctgaaaatggcatcatagagacgaaagcccctctggacagggag
tctaaatttgtggtagacaacacctacacggctctcatcttggcgagtgacaatgggatg
cctttgctcacaggcacaggaactcttctcctgtacctggaggatgtgaatgacaatggg
ccagtgccagacccacgatcctttgacatctgcaaccggagccctgaacgcaaggaattg
aacattgtggacaaggatcttcctccaaacactcaacccttcaaagcaatgctgctcttg
ggctcaagcgccaactggacggtcgaagtaaacggagataaactggtcctcgaattgacc
aagcagctggagccaggtgaatacagcattgcccttgagctacaggatgccggggaagtg
tcccagacaacaacagtcaaagcccaagtgtgtgactgtgagggggcagccaagaattgc
gagaagagggcatatatcgcaggcgggatggggattccagccattctgggcatccttggt
ggcatccttggcttcctgatcctcctgctcctgctgctgctgtttgtgaggaggaggaag
gcagtgaaggagcctttgcttccaccagaggatgacacacgagacaacgtctactattat
gacgaagagggtggtggagaggaggatcaggactatgacatgagccagctgcaccgtggc
ctggattcccgccctgaaatcacccgcaatgatgttgttccgactctcatgccagctccg
caataccgcccacggcctgccaaccctgatgagattggcaatttcattgacgagaacttg
aaggcagcagatacagaccccacggcacccccatacgactctctgcttgtgtttgactat
gagggtagtggctctgaagcagcctccctcagttctctgaattcctccaatggtgacaga
gaccaagattatgactatctgaatgactggggcaaccgtttcaagaagctggctgacatg
tatggagggggcgaggaagaagactag
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