Podarcis raffonei (Aeolian wall lizard): 128419454
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Entry
128419454 CDS
T09310
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128419454 (CHD9)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128419454 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
128419454
NCBI-ProteinID:
XP_053256131
LinkDB
All DBs
Position
8:56876007..56951054
Genome browser
AA seq
2890 aa
AA seq
DB search
MTDPMMDFFDDANLFSDTLESLSDDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQ
TQQKINEFGQLNQYDSLKLQVNQSFSSPAENVLSPHSEFNCSPIHPQSQTNGMFPDVADG
SPMWGHQTSSSVSNQNGSPFHQGRSQSMQQNKSFVAHHDFALFQASEQHHPCASLQSQQN
RNGINAGEDTQSQSENFMEVNASVPHRTSVSHAPQGATLSDSQQSISVQSFSQTASDSPH
FCGTQDGNFDGHSPTITPCSVNTQFSPPYSYSSNHVSPTSLLQSSTALSVSQQTHSLSDF
PESDAFAPQIGTKQENTDHLLNSSPSLNSNNFHVLHSAHPRGSFSGSKLSAVNINFSAPA
GSGPQLSYFSDPIEGNGFSSLDENLLHQVESQAESFTELDPETLLQEDLLPQFSESTFVQ
DSSSNELEHHLEHHVTPQVTEPSHLVRTQSQNCNHPWYPPSSNQHLQERKRVNAQGQPPS
SKKTDGSGTYAKLQNTQVKSMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERNIPR
VMSPENFPSVSAEGREEKKGRKVKSKPKDKESKKPKTGSSSKTKERAKIGKIIITLGKKQ
KRKNESSDEMSDAKQTTQQSFKDETSQKRRSNRQIKRKKYAEEGEGKQSEEETKVSVKIK
KNSTPLPAEQPLQLFVENPSEEDAAIVDKILSSRIIKKEIPGGATVEAEEFFVKYKNYSY
LHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYIEVDRVLEVSFCE
DKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQALRPDSRRLDRPPSNSW
KKIELSREYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLYEILRT
GIRGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRIIRG
TYKFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT
GTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKED
VEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCN
HPYLIKGAEEKILGEFRETYNPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFS
QMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGI
NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLG
LDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQR
RTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDTISGRNSLVI
DTPRIRKQTRPFSSTKDELAELSDIESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLLVY
GWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQT
RELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCN
KVLLRVRMLYYLKQEVIGNECSKVFDGVEASEIDIWVPEPDHSEVPAEWWDTEADKSLLI
GVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYIDGDVEDPEYKPAPAMFK
DDMEDDISSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQTQQMQ
PAFPVQACVMQNPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQFD
WTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTL
YRIELLRKVREQAVRHPQIFERLKLCQLNPDLPVWWECGTHDWDLLIGAAKHGVSRTDYH
ILRDPELSFMSAQRNYSQSKVALPITPTPLLHQYQMVLSASPLAPQARLLDIKGNALEDT
KVKNENHKEDPHSSGEESISTEDMRTGVKTEPLSPNNGTPSHATDQKPVVKADSDRRMVA
ARTEPLTPNTASKKQRPNKRGSESSSDSDSDSDRSTCSSRSSSSSSSSSSSCSRSRSGSS
SSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEESQKRPEGAPLLKAYDEESVASL
STVQDETQDSFQMNNGTPNSNCILQGGYMLAASYWPKDRVMINRLDSICQTILKGKWPSA
RRSYDSNTVASFYTTKLLDSPGAAAEYSEPSVPTPPSADVKEENDQSPQMSKVKKHVREK
EFTVKINDEGGLKLIFQKQGLSQKRPFESEDGTLGQQQYLARLQELQNASETSLANFPKS
LPELGTSSQSTATANGIIVDDQPVMKKRRGRRKNVEGVDILFINRNKAPNHVCHSINVPQ
VAPGINPALPYVPSHGMCDAESPVPVINLKDGTRLAGDDAPKRKDLEKWFNEHPGYVEDL
GAFIPKMQLHEGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDL
CRFLKENSEYGVAPEWADVVKQSGFLPESMFDRILTGPVVREEVSRRGRRPKSEVAKAAA
AAATAAASIPVNPLLANGLLPGVDLSTLQALQQNLQNFQSLQVTAGLMGMPTSLNTAGEA
KNMAAVFPMLLSGMAGLPNLLGMGGLLTKSTESASEEKKGNDSREPDGKKERTESQNAHN
GGENSVSGSPSTSSAAAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQ
NNENNGTGTAKQTEEKEENSRVKDQEDKRGAEPSSRNENSTDEGSEKADASSGSDSTSSS
SEDSDSSDED
NT seq
8673 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcctatgatggacttttttgatgatgccaacctctttagtgataccttagaa
agtttgtctgatgatgcttttgtacaaactggacctgtttcacttgttgatgaattgaac
ttgggtgcagagtttgaacctttacacatcgactcattaaaccatgtgcaggaaacgcaa
actcaacaaaagataaatgaatttgggcagctaaatcagtatgattcattgaaacttcaa
gtaaaccagtccttcagcagcccagctgaaaatgttttatcaccacactctgagtttaat
tgctcacccatccatccccaaagccaaaccaatgggatgtttcctgatgtggcagatgga
agcccaatgtggggacaccaaacttctagcagtgtttcaaatcagaatggatcccctttt
caccaaggtcgttcacaatctatgcagcagaacaaaagctttgtagcacaccatgacttt
gccttatttcaggccagcgaacagcaccatccgtgtgcctcattgcagtcgcagcaaaac
agaaatggcatcaatgcaggagaggacactcaaagtcagtcagaaaacttcatggaggtt
aatgcgtctgttccacatagaaccagtgtttctcatgcacctcaaggtgctactctttca
gactcacaacagtctatctctgtgcagtcattttctcagactgcaagtgactcacctcac
ttttgtgggactcaagacggaaactttgatggacactctcctactataactccatgctct
gttaatacacagttttcacctccttattcctactctagtaaccatgtttctcctaccagt
cttctacagtcttcaacagctctttctgttagtcaacaaactcattctctatctgatttt
ccagagagtgatgcctttgctcctcagatagggaccaagcaagaaaatacagatcacctc
cttaactcaagtccatctttaaattcaaataatttccatgtgttgcattcagcacatcct
cggggcagcttcagtggttcaaaactgtctgcagtgaacattaatttttctgcccctgct
ggctctggtcctcagctgagctatttcagtgatcctatagaaggcaatggtttttcgtct
ttggatgagaacttgcttcatcaagtcgaatctcaagctgaatcatttacggaacttgat
ccagaaactctccttcaggaagatctccttccccagttcagtgaatctacatttgtgcag
gacagctcaagtaatgagttagaacaccacctagaacaccatgttaccccacaagtgaca
gagccctcccaccttgttcggactcagtctcaaaattgcaatcatccctggtatcctcct
agttctaatcaacacctgcaagagcgaaagcgtgtaaatgctcaagggcagcctccttcc
tccaagaaaacagatggttctgggacatatgctaagttgcagaatacccaggtgaaatct
atgtctgagaaaaaacagaaaaaaaaggtggaatctgaaagtaagcaggagaaagctaat
cgcataatatcggaggcaatagcaaaagcaaaagagagaggggagcgaaacattccacga
gtaatgagtccagaaaacttcccaagtgtttcagcagaaggaagagaggaaaagaagggc
aggaaagttaaatcaaaaccaaaagacaaagaaagcaaaaaacccaaaactggctcttca
tccaaaactaaagagagagcaaaaattggcaagattattattactttgggcaaaaagcaa
aagagaaaaaatgagtcttcagatgaaatgtctgatgctaagcagacaactcagcagtcg
ttcaaagatgagacttctcagaagagaagatcaaatcgacaaattaaaaggaagaagtat
gcagaagaaggtgaaggaaaacaatctgaggaagaaaccaaagtttctgtcaaaataaaa
aagaattccacccctttacctgctgaacagcctttacagttatttgtagagaatccaagt
gaagaagatgcagcaattgtagataaaattttatcttccagaatcattaagaaagaaatt
cctgggggagcgacagtggaagccgaggaattttttgttaaatacaaaaactactcctac
ctccattgtgaatgggctactgaacaacagcttttaaaagataaaagaatccagcagaaa
atcaaacgtttcaagctgaggcaagcacaaagagcccatttttttgcagatatggaggaa
gaaccttttaatcccgattatattgaagtagatcgtgtgttagaagtgtccttttgtgaa
gataaggacactggagagcctgttacttactacttagtaaaatggtgctcgttgccatat
gaagacagcacatgggagctgaaagaagatgtagaccaaggaaaaatagaagagtttgaa
cagctgcaagctttaagacctgattcaaggcggttggatcgacctccttctaattcatgg
aagaagatagagctatccagggaatataaaaatggcaaccaactcagggaataccagtta
gaagggctcaactggctacttttcaactggtataatagacaaaactgcattttagcagat
gaaatgggtcttggcaaaaccatccagtcaataacattcctgtatgaaatcctccggact
ggtataagagggcctttcttgatcatagctccactttccaccatagccaactgggaaaga
gagttccgcacatggactgatcttaatgttgtggtatatcatgggagtatggttagcaga
cagatgatacagcagtatgagatgtatttcagagattcacagggtcgcatcattagaggt
acatacaagttccaggctatcattaccacatttgaaatgattcttggtggctgtccagaa
ctcaatgccattgaatggcgctgtgttattattgatgaagcacacagattgaagaataaa
aactgcaaacttctagaggggctcaaactcatgaatcttgagcacaaggtgctattgaca
ggcacaccactgcaaaacacagtagaagaacttttcagccttcttcacttccttgaacct
ttgcgcttcccagcagaatcaacattcatgcaagagtttggagaccttaaaacagaggag
caggtgcaaaagttgcaagctatcctgaaaccaatgatgctgagaagactgaaagaagat
gtagagaagaagctggcaccaaagcaagaaactattattgaagtggaattaacaaatatc
cagaagaaatattatcgagctattttagagaaaaactttgcatttttgtcaaaaggtgca
ggccaagccaatgtacccaacttggttaacactatgatggaactcaggaaatgctgcaat
catccatatcttatcaaaggtgctgaggaaaaaatcttaggagagtttagggagacctat
aatccaactgctcctgatttccacttgcaagcaatgatccagtctgctggaaaactggtc
ctcattgacaaacttcttccaaaaatgaaagcagggggccataaggtgcttattttctcc
cagatggttcgctgtcttgatatccttgaagattatctgatacataaaaggtacctgtat
gagcgaatcgatggaagagtaagagggaacttacgtcaggctgccattgatcgatttagc
aaaccagactctgatcggtttgttttccttctctgtaccagagctggtggattgggcatt
aatttaactgcagcggatacttgcataatttttgattctgactggaatcctcagaatgat
ttgcaggcccaagctcgttgtcataggattggtcagaacaaagcagtgaaggtctaccga
ctaataactcggaactcttacgaaagagagatgtttgacagagcaagtctgaagcttggc
ctggataaggctgtcttacagagcatgagtggaagagaaaatagtgttggtggtatccaa
caactttctaaaaaagaaattgaagatttgcttcgaagaggtgcatatggtgccattatg
gatgaagaggatgagggttctaaattctgtgaagaagatattgatcaaatcttgcagcgt
cgcacaaaaacaattacaattgaatctgaaggaaggggctccacatttgctaaggctagc
tttgttgcatctggaaacaggacagatatttcattagatgatcccaacttctggcagaag
tgggccaaaaaagcagaaatagacatagacaccatcagtggtagaaatagcttggttatt
gacactcctagaattaggaagcaaacaaggcctttcagttctacaaaggatgaacttgct
gagctatctgacattgaaagcgaaggggatgataaaccaaaacttcggaggccttgtgac
cgctccaatggatatggaagaacagaatgttttagggtggaaaaaaacttgctagtttat
gggtggggccgttggagagagattttatcacatgggcgattcaagagacaattaaacgaa
caggatgtagagataatctgccgagcccttctagcatattgccttgtccattacagagga
gatgaaaaaataaaaagttttatatgggaccttattacaccaacagaggatgggcaaact
cgagagctacagaatcacctaggtttgtcagctcctgtccccaggggccgaaaaggaaaa
aaagttaaaactcaggccagcacttttgatattcataaagcagaatggcttcgaaagtat
aatccagagcatttgttgcaagatgatggatataaaaaacacataaaacatcactgcaac
aaggtcttacttcgagttagaatgttgtattacttgaagcaagaagtcattggtaatgag
tgctcaaaagtttttgatggagttgaagccagtgaaattgatatttgggtccctgagcca
gatcattctgaagtgccagcggaatggtgggatacagaagcagataaatctctcttaata
ggagtttttaaacatggttatgaaaagtacaacacaattagagcagatgcagctctatgc
ttcttggaaagagtgggaaaacctgatgacaaggcagtcgctgcagaacagagagccaat
gactatattgatggagatgtagaagacccagaatataaaccagccccagcaatgtttaaa
gatgacatggaggatgatatatcatcaccgggggatcttataataacagatggagatggt
cagatgattgaaggggacaagctttattggccaactcagtctgccttaactacacgcttg
cgccgcctaataacagcatatcagcgtactagtaagaacaggcaaacccaacagatgcaa
cctgcatttccagtgcaggcctgtgtgatgcagaatccatatgaagaagctgctttaaat
ccaaaaatggctgccaaaattgaaagacaacaaagatggacaagaagagaagaagctgat
ttctacagagtggtttcaacttttggtgtagtgtttgatcctgacagaggccaatttgac
tggacaaagtttcgagccatggctaggctacataagaaaacggatgagagtttagaaaaa
tacttgtatgcatttatggccatgtgcaggagagtctgccgcctgccttcaaaagatgaa
cttgtggatcccaatattttcatccagccaattacagaagagcgtgcctctcgaactttg
tatcgcattgaacttctcaggaaggtgcgagaacaagctgtccgtcatccacagatattt
gagcgattaaaactttgtcagcttaatccagatttgccagtttggtgggaatgtgggact
catgactgggatttactgattggagctgcaaagcatggggttagccgaacagactaccac
atccttcgtgatcctgaactttcatttatgtcagcccagaggaactacagtcaaagtaaa
gtagcacttccaataactcctacaccacttttgcatcagtaccagatggtgttgtctgca
tctcctcttgcacctcaggcaaggctgctagatattaaagggaacgcacttgaggataca
aaagttaagaatgaaaaccataaagaagatccacattcttccggggaggaatccatatct
actgaggatatgcgaacgggagtaaagactgaacctttgagcccaaataatggcacacca
tctcatgctacagaccagaagcctgttgtaaaggcagacagtgacaggcgtatggttgct
gcaaggacagaacccctaactcctaacactgcttccaaaaaacagagacctaacaagaga
ggatcagaatcaagctccgattcagactctgattcagatagatcaacctgttcttccaga
tcatcttcatcttcatcctcctcttcctcctcttgctcacgttccagatcaggatccagt
tcctcatcttcttcatcttgttcttcagcatcatcgtcatcttcatcatcctcttcctcc
tcctcctcctcctcatcctcttcatcagaagaaagtgacagtgatgaagaagaatcacag
aagagaccagaaggagcgcctcttttgaaagcatatgatgaagagagtgtagcttcccta
agcactgtgcaggatgaaacccaggacagttttcaaatgaataatggaacaccaaattct
aactgtatcttacaaggtggatatatgttggctgcttcctactggccaaaggatcgggtt
atgattaaccgtctggatagtatttgtcaaacaatattgaaaggtaaatggccttcggca
cggagaagttacgacagcaataccgtggcttcattttataccaccaagcttttagacagc
ccgggtgccgctgcagagtacagtgagcccagtgtaccaacacctccaagtgcagatgtt
aaagaagaaaatgatcagtcaccacagatgtcaaaggtgaagaagcatgtacgggaaaag
gagtttacagtgaaaatcaatgacgaagggggtttgaaattaatttttcagaagcagggg
ctttctcagaaaagaccatttgaaagtgaagatggtacattaggacagcagcaatacctt
gccaggctacaggaactccagaatgcttcagagaccagccttgccaatttcccaaagtct
ttgccagagttgggaacttccagtcaatcaacagctactgcaaatggaataatagttgat
gaccagcctgtaatgaaaaagaggagaggaaggaggaagaatgtggaaggagtagatata
ctgtttataaatagaaacaaagcacctaaccacgtttgccatagcattaatgtccctcag
gttgctccaggaataaacccagcacttccatatgtaccatcccacggcatgtgtgatgca
gaaagcccagttccagttattaacttgaaagatggaacaagacttgcaggcgatgatgcc
cctaaaagaaaagatttggagaaatggttcaatgaacatcctggctatgttgaagattta
ggagcttttattcctaaaatgcagcttcatgaaggaagacccaaacaaaaaaggcaccgt
tgtcgcaatcctaataagctggatattaatagccttacaggggaagaacgtgttcaacta
atcaatagaaggaatgctagaaaggtaggaggtgctttcgctccaccactgaaggacctg
tgcagattcctgaaagagaattctgaatatggagtagctcctgaatgggcagatgttgta
aaacaatctggatttcttcctgaaagcatgtttgaccgtattctcacagggcctgttgtg
cgagaggaagtaagcaggagagggagaagacctaaaagcgaggttgccaaggcagctgct
gctgcagcaacagcagcagcaagcataccggtcaaccctttgttagccaatgggctgctg
ccaggggtggatctatctactctccaggccttacagcaaaatctgcaaaattttcagtca
ctgcaagtgacagcaggcttaatgggaatgccgactagtttgaacactgctggggaggcg
aaaaacatggctgctgtgtttcccatgctgctttcaggaatggctggcttaccaaatttg
ctaggaatgggaggactcctcacaaaatctacagaatctgcttccgaggaaaaaaaggga
aatgactcaagagagcccgacgggaaaaaagaaaggacagagagccaaaatgcacataat
ggtggagaaaactctgtgtcgggttctccttccacatcatctgctgctgctgcagccgcc
agcccccttgctcttaaccccttactgttgtccaatatactttatccagggatgcttctc
actccaggccttaatctccatatcccagctttgtcccaatccaatatttttgatgtacag
aacaatgaaaacaatggcacaggcacagccaagcaaacagaagagaaggaggaaaattct
agagttaaagatcaagaagacaaaaggggagcagagcctagctctcgcaatgaaaacagc
acagatgagggttcagagaaagccgatgcttcctctgggtcagacagtacatcgtcctcg
tctgaggattcggattctagtgatgaagactga
DBGET
integrated database retrieval system
