Podarcis raffonei (Aeolian wall lizard): 128419494
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Entry
128419494 CDS
T09310
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128419494 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128419494 (VPS35)
Membrane trafficking [BR:
praf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
128419494 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
ADIP
Motif
Other DBs
NCBI-GeneID:
128419494
NCBI-ProteinID:
XP_053256224
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Position
8:59228014..59254792
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVTDLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNVLTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQGLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFGEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSSRNMDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgactacacagcagtctcctcaggatgagcaagagaagctcctggatgaagccatt
caagctgtcaaggtccagtccttccaaatgaagcggtgtttggacaagaacaaactaatg
gatgccctgaaacatgcctctaacatgcttggtgagctgcggacttcgatgctttcccca
aagagctattatgagctctatatggcgatctccgatgagctgcactacctggaggtgtac
ctgacagatgagtttgccaagggaaggaaggtgacggatctctatgaactggtgcagtat
gctggaaacatcatcccgcggctatatttactcataactgttggggttgtctacgtgaag
tccttccctcagtccaggaaggatatcttaaaagacctggtggaaatgtgccgtggtgtc
cagcatcctctgaggggcctgtttctgcgcaactatctccttcagtgcacgcggaacatc
ttgcctgatgatggggaacagacagatgaagaaacgaccggggacatcagcgattccatg
gactttgtgctgctgaactttgctgagatgaacaagctctgggtgcgaatgcagcaccag
ggacacagtcgtgaccgagagaagagggagcgcgagaggcaggagctgagaatcctggtg
ggaaccaacctggttcggctgagtcagctggaaggggtcaatgtggagagatataagcag
attgtcttgcctggcatattggagcaagttgtcaactgcagggatgccttagctcaggaa
tacctcatggagtgcatcatacaggtcttcccggatgaatttcacctccagaccctgaac
ccttttctacgagcctgtgcagagttgcaccaaaatgtgaatgtgaagaatatcatcatt
gctttaattgacaggcttgcgctctttgctcaccgagaggatgggccagggatccctgct
gacattaagctcttcgacattttctcccagcaggtggctactgtcatacagtctagacaa
gatatgccttcggaggacgtggtgtcgcttcaagtctctctcattaacctggcgatgaag
tgctacccggatcgtgttgactatgtcgacaaagtgctggagacaacggtggaaatcttt
aacaagctgaacctggagcacatcgccacaagcagcgctgtatccaaggagctgacgagg
cttttgaagatcccggtcgacacctacaacaatgtcctgactgtcttgaaactgaaacat
ttccacccgctctttgagtacttcgactacgagtccaggaagagcatgagttgttatgtg
ctcagcaatgtgctggattacaacacggaaatcgtctcccaagaccaggtagatgccatc
atgaacctcgtgtcgacgctgatccaggaccagccagaccagccggctgaggatccagat
cccgaggattttgcagatgagcagggcctcgtgggcaggtttattcacctcctccgttcc
gacgatcctgatcagcagtacctgattttaaacactgcccggaaacactttggcgcggga
ggaaaccagcgcatccgtttcacgttgccccccttggtctttgctgcctaccagctcgct
ttccgctataaggagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatc
ttctcgtttgcgcaccagacgatcagcgctttgatcaaggctgagctggcagagctccct
ctgcggctgttcctccagggggcgctggcggcaggagagatcgggtttgagaaccatgaa
acggtggcttacgaattcatgtcccaggcgttctctctgtatgaagatgaaatcagtgac
tcaaaagcccagctggctgcaatcaccttgataattgggacatttgagcggatgaaatgt
tttggcgaggagaaccacgagcccctgaggacccagtgcgccctggcggcttccaagctg
ctgaagaagccggatcagtgccgagctgtcagcacctgtgcccatctcttctggtccagc
cggaacatggacaagaacggagaggagctccacggcgggaagagagtcatggagtgcttg
aaaaaggcattaaaaatagcaaatcagtgcatggacccctctctccaagtccagctcttc
atagaaattctcaacagatacatctacttctacgaaaaagagaacgatgcggtgacaatt
caggttttgaatcagctcatacagaaaatccgggaagacctccctaaccttgaatcgact
gaggaaacggaacagatcaacaaacactttcacaacacgctggagcacctgcgcttgagg
agagagtcccctgagtcggagggccccatctacgaagggctggtcatatag
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