Podarcis raffonei (Aeolian wall lizard): 128419534
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Entry
128419534 CDS
T09310
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128419534 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128419534 (EXOSC6)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128419534 (EXOSC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128419534
NCBI-ProteinID:
XP_053256323
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Position
8:complement(62598585..62600092)
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AA seq
277 aa
AA seq
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MPLDHRRVPGPEESQTPLLFAPVEAPEVPPRDPSALQPLFARAGLLSQAKGSAYVELHGG
TKVLCSVAGPREAGGGAGAAAPGEPRGRLVCEFRRAPFSGRGARIRPSEREPELALALQE
ALEPAVRLARYPRAQLEVSALLLQDGGSALAAALCAAGLALADAGVELYDLVAACALCRA
PGGEWRLQPSEPEERAADARLTVALLPSLNQVAGLLGSGEGGPPDSWAQAVRLGLDGCQR
LYPLLRQSLLRAAKRRPTPGTQAPTDTDTAQLPAATA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggaccaccgccgggtgccggggccggaggagtcccagacgccgctgctcttc
gcgcccgtcgaggccccggaggttccaccccgcgacccgtcggcgctgcagccgctcttc
gcccgcgcggggctgctgagccaggccaagggctcggcctacgtggagctccacggcggc
accaaagtgctgtgctccgtggccgggccgcgcgaagccggcggcggcgcgggcgctgcg
gctccgggcgagccccgcgggcggctggtgtgcgagttccgacgggcgcccttctcgggg
cgcggagcgcgcatccgccccagcgagcgggagcccgagctggcgctggcgctgcaggag
gcactggagccggccgtgcgcctggcgcgctacccacgggcacagctggaggtgagcgcg
ctgctgctgcaggacggcggctcggcgctggcggccgcgctgtgcgccgcggggctggcc
ctggccgacgccggagtggagctctacgacctggtggcggcgtgcgcgctgtgccgggcg
ccgggcggagagtggcgcctgcagcccagcgagcccgaggagcgcgccgccgacgcccgc
ctcaccgtggcgctcctgccctcgctcaaccaggtggccgggctgctgggcagcggcgag
ggagggccccccgacagctgggcgcaagccgtgcgcctcggcctcgacggatgccagcgc
ctctacccgctgctccgacagagcctcctgcgtgctgccaagcgccgacccacgccaggc
acccaagcgccgaccgacacagacacggcccagcttcccgccgccaccgcctga
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