Podarcis raffonei (Aeolian wall lizard): 128419777
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Entry
128419777 CDS
T09310
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128419777 (CLSTN1)
Cell adhesion molecules [BR:
praf04515
]
Cadherins
Cadherin related
128419777 (CLSTN1)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Toxin_R_bind_N
Glyco_hydro_16
V_ATPase_I
EphA2_TM
SID-1_RNA_chan
Cadherin_C_2
PFF1_TM
TMEM132_C
Zip
Motif
Other DBs
NCBI-GeneID:
128419777
NCBI-ProteinID:
XP_053256857
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All DBs
Position
8:complement(74943150..75003840)
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AA seq
975 aa
AA seq
DB search
MLPSRLAPACLLLAALLCGRVRAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKD
APLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGMIRSKEKLDCELQKDYT
FTIQAYDCGKGPDGANMKKSHKATVHIQVNDVNEYAPVFKEKSYKAAVIEGKRYDNILKV
EAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKK
RAAEDVLVKITIKPTCKPGWQGWSKRMEYEPGTGSLALFPNIHLETCDEPITSVQATVEL
ETNHIGKGCDRDTYSEKSLHRLCGASSGTAELLPPPSSTANWTVGLPTDNGHDSDQVFEF
NGTQAVKVPDNVVTVNMKEPFVISVWMRHGPGAREKETIICNSDKTDMNRHHYSLYVHNC
RLGFLFRQDPSEGQSYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDGVSFDPLSVT
EDYPLHPSKIESQLVVGACWQEYTGNENDTEKATETPAGGELRMAQFFRGNLAGLMIRSG
KLENKKVIDCLYTCKEGLDLQTSEGVGKGLKIHMNPSQSVLSLEGDDIDRFDKAMQHIAY
LNSRQFPTPGIRRIKITSTVKCSNDEACIAIPFVDGYIMVLQPEEPKISLSGINHFARSA
SEFESPEGVSLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIMHNLDTCEVTVVGD
ELSQEQESLEVDMVRLQQKGMEMSTSNLGMIITGVDTMASYEEVLHLIRYRNWHAVSLFD
RKFKLVCSELNGRYVSNEFKVEVNVIHTANPVDHASHIAAQPQFVQPVHHSFVDLSGHNL
ASPHPGFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDSGKENEMDWDDS
ALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEEDDITSAESESSDEEEGEREEDQQNV
NRQQQLEWDDSTLTY
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctcccggctggcgcccgcctgcctcctcctggctgcgctgctctgcggacgg
gtccgcgctgcccgagttaacaagcacaaaccgtggattgaaacaacttaccatggcata
gttacagaaaacgacaacacagtactgttggaccccccattgatagcactggataaggat
gcacctctccgttttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgt
gggtttaaaatccatggccaaaatgtcccttttgaagcggtggtggtggataaatccacc
ggggaggggatgatccgatccaaagagaaactggactgtgagctgcagaaggactacacg
ttcaccatccaggcctatgattgtgggaagggcccagacggagcaaatatgaagaaatcc
cacaaagcaacggtgcatatccaggtgaacgatgtcaatgagtatgccccggtgtttaaa
gagaagtcctacaaagctgccgttattgagggcaagaggtatgacaacatcctgaaagtg
gaagcagtggatgctgactgctctccccagttcagccagatctgcagctatgaaatcgtc
acaccagatgttccctttgctattgacaaggatggttacattaagaacacagagaagctg
aactacggcaaggagcaccagtataagctcaccgtgacggcctatgactgtgggaagaag
agagctgctgaggacgtgctggtgaagatcaccattaaacctacatgcaagccaggctgg
caaggctggagcaaaagaatggagtacgaacctggaactggctccctcgctctctttccc
aacatccatctggagacatgtgatgagcccatcacctccgtgcaggccacagttgagctg
gagaccaaccatatcgggaagggctgtgaccgagatacttactctgagaaatcccttcac
aggctctgtggtgcttcctctggcacagctgagctccttcctcctccgagcagcacggca
aactggacagtaggccttccgactgacaacggccatgacagcgaccaggtcttcgagttc
aatggcacccaagccgtgaaggtcccagacaacgttgttaccgtcaacatgaaagagcct
tttgtgatttccgtgtggatgaggcatgggcctggggccagggagaaggagaccatcatc
tgcaactcagacaagacagatatgaaccggcaccactattccctctatgtgcacaattgc
cgtcttgggttcctctttcgtcaagatccttcggaggggcagagttacaaaccagcagaa
ttccactggaagctgaaccaggtgtgcgacaaggaatggcatcactatgtcctcaatgtc
gaatttccagcagtgaccctgtacgtggatggagtttcctttgaccctctatcagtgacg
gaagactacccgctccatccctccaaaatagaatcccagctggtggtcggagcctgctgg
caagaatatacaggaaatgagaatgacacagaaaaagcgaccgagacccctgcaggtgga
gagctccgcatggcccagttcttccgaggcaacttggccggcttaatgatccgctctggt
aaactggagaacaagaaggtgattgactgcctttacacctgcaaggaaggactggattta
cagacctcagagggcgtcggcaaaggcctgaagatccacatgaacccgagccagtcagtg
ttgagcttggaaggagacgacattgaccggtttgacaaggccatgcagcacatcgcctac
ctaaactcccgccagttccccacacctgggatccggaggatcaagatcacaagcaccgtg
aagtgttccaacgatgaagcctgcatcgccatcccctttgtggatggctacatcatggtc
ctgcagcctgaagagcccaagatcagcctgagtggcatcaaccactttgcccgctcggct
tcggagttcgagagccctgaaggggtctccctgttccctgagcttcgcatcatcagcacc
atcacgcgagaggttgagccggagggggagggagatgaggaccccacagtccaagagtca
ctggtgtctgaggagatcatgcacaacttggatacctgcgaggttacggtggttggtgat
gagctcagccaggagcaagagagcctggaggtcgacatggtccggctgcagcagaagggg
atggagatgagcacttccaacctgggcatgatcattaccggggttgatactatggccagc
tatgaggaggttttgcacttgattcgctaccgcaattggcacgcagtgtctctgtttgac
cgcaagttcaagctggtatgttcggagctgaatgggcgctacgtcagcaatgaatttaaa
gtggaggtaaacgtgatccacaccgccaaccccgtggaccatgccagccacattgcagca
cagcctcagtttgtccagcctgtccaccattcctttgtcgacctctctgggcacaacctg
gctagccctcacccaggattttcagtggtcccaagcactgccactgttgtgattgtggtc
tgcgtcagcttcctagtattcatgatcatcctaggcgtgttccggatcagagctgcccac
cagcggacaatgcgggaccaggattctgggaaggagaacgagatggactgggacgactca
gccttgaccattactgtcaaccccatggagacatacgaggaccagcacagcagcgaggag
gaggaggaagaggaggaggaggagagtgaggatggggaggaggaggatgacatcaccagc
gctgagtccgagagcagtgacgaagaggagggggagcgggaagaggaccagcagaacgtg
aacaggcagcagcagctagaatgggatgactccacgctcacctattga
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